Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00175 ATGGACAGATCGCCACAACACTGGAATCTTGCCTTCAACTTATGGCTTGCCTTTACTCAGCTTTCCATTAGTTTTGGCAACCCCCAGCTCCAGGAACATGTTGGGAGCGATAATTACAATCTTGAATTCATCAGCATAGATTGTGGGCTGCCTGCAAACTCCAGTTATACTGAGCCAAATACAAGCATAAATTTCATTTCAGATGACAGGTTCAATTATGATGATCGTGATCGCTTCTGGGACCCATATAATCCCTATGGTTCAACACAATTAAGTGCTACTGTCACGATAGGACAAAACGTTTATGATCTGCCGCAAGTTGTCATGAGCACAGCAGCTACCCCGTTAAATGCTAGCGCTCCTGTGAACTTTTCGTGGCTAACCAACCGAAGTGACAAATACTATCTTTATATGCACTTTACTGAGCTCCAACAGTTAGCCAGCAATGAGACAAGATCATTCAACATCACATTAAACGGTGCCGTTTGGAGAAGTAATGTTGAACCAGCTTATCAAATTACAAACACGATTTATAGCACCTCACCTTTCAGTGGGGAGAGAATTGAAATTTCACTTGAGAGGACTCAGAAATCAACCCTTCCTCCTATCTTAAATGCGATGGAGCTCTACAGAGTAAAAGATTTCCAGCGATTAGACACAGACCAAGAAGATGTTGATGCAATTACATCCATCAAGTCAACTTATGAGGTGACGAGAAATTGGCAAGGAGATCCATGTGGCCCTGTAGAATACTTGTGGATTGGACTAAATTGTAGCGATGATGACAACAATCCCCCTAGAATCACCGCATTTGTGAGGCAAAATCCATATCTATGTGAATCTCCTCCATGCAATGACAACAACAATGCCAACAGCAAAAAGAGGAATATTGTTGTTCCCTTGGTAGCATCACTTAGTGGGGCTTTCACCCTTCTAGTAGCAGCGGCAGCTCTCTTCTTGACCCTAAAATGGAGAAAATCAAAATATGTCAGAAAAGAAGCCGATCGAAATGATACATCACTGCAAACAAAAAGACAATATTCATATTCTGATATCATCGAAATGACTAACAACTTCAATAGAATTCTTGGAAAAGGTGGGTTTGGATCAGTTTACCTTGGCTGTATTGATGACACTTGGGTAGCTGTAAAGATGCTTTCTCCATCATCAGTTCAGGGCAATCAACAATTCCAAGCAGAGGTTAAGCTTTTGATGAGAATTCATCATAGAAATCTGACTTCCCTTATTGGGTATTGCAATGAAGAAACAAACAAAGGGCTCATCTATGAGTACATGGCTAAAGGAAACTTACAAGAGCATCTTTCAGGCAAAGACAGCAAATTTGGGTTGTTGACTTGGAAAGACAGATTTCACATAGCAATGAATGCAGCCCAAGGCTTGGAGTATCTACATTATGGTTGTAAGCCGCCTATAATCCATAGAGATGTTAAATCTACAAACATCTTGCTGAATGAACAATTCCAAGCAAAATTATCTGACTTTGGCTTATCCAAAATGATCCTAATTGAAGGGGAAACTCATGTTTCAACTGTTGTTGCTGGCACACCTGGTTATTTGGATCCTGAATACTCAGCATCGAACAGAATTACAGAGAAAAGTGATGTTTATAGTTATGGAGTTGTTCTTCTGGAGATAATTACGGGTCAAGCAGTATTTGCAAGAAATGAAGAGAAGACTCACATAAGCCAATGGGTTAGGTCCATGGTTGGTAATGGAGATATCAGTAATATTGTTGACTCAAGGTTACTTGGTGATTTTGACAGTAACTCTGCCTGGAAAGCAGTTGAAGTAGCATTGGCATGTGTGTCTCTAAACTCCAACAGTAGGCCAACCATGAGTGAGGTGGTGTCACAGCTAAAGGAGTGTTTGGCACCAGAGCTATCTCAAACAAACAATAGTGGTTTTTACACAGGAGACCTTGTTGAGGTCAGAATGAATGCTTCTATGGAGTTCACTCCCTTGGCAAGGTAG 1992 0.4081 MDRSPQHWNLAFNLWLAFTQLSISFGNPQLQEHVGSDNYNLEFISIDCGLPANSSYTEPNTSINFISDDRFNYDDRDRFWDPYNPYGSTQLSATVTIGQNVYDLPQVVMSTAATPLNASAPVNFSWLTNRSDKYYLYMHFTELQQLASNETRSFNITLNGAVWRSNVEPAYQITNTIYSTSPFSGERIEISLERTQKSTLPPILNAMELYRVKDFQRLDTDQEDVDAITSIKSTYEVTRNWQGDPCGPVEYLWIGLNCSDDDNNPPRITAFVRQNPYLCESPPCNDNNNANSKKRNIVVPLVASLSGAFTLLVAAAALFLTLKWRKSKYVRKEADRNDTSLQTKRQYSYSDIIEMTNNFNRILGKGGFGSVYLGCIDDTWVAVKMLSPSSVQGNQQFQAEVKLLMRIHHRNLTSLIGYCNEETNKGLIYEYMAKGNLQEHLSGKDSKFGLLTWKDRFHIAMNAAQGLEYLHYGCKPPIIHRDVKSTNILLNEQFQAKLSDFGLSKMILIEGETHVSTVVAGTPGYLDPEYSASNRITEKSDVYSYGVVLLEIITGQAVFARNEEKTHISQWVRSMVGNGDISNIVDSRLLGDFDSNSAWKAVEVALACVSLNSNSRPTMSEVVSQLKECLAPELSQTNNSGFYTGDLVEVRMNASMEFTPLAR 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00175 663 SMART serkin_6 357 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach3g00175 663 SUPERFAMILY Protein kinase-like (PK-like) 341 626 IPR011009 -
Bach3g00175 663 FunFam Leucine-rich repeat receptor-like protein kinase 334 431 - -
Bach3g00175 663 ProSitePatterns Protein kinases ATP-binding region signature. 363 384 IPR017441 GO:0005524
Bach3g00175 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 478 490 IPR008271 GO:0004672|GO:0006468
Bach3g00175 663 Gene3D Transferase(Phosphotransferase) domain 1 432 644 - -
Bach3g00175 663 ProSiteProfiles Protein kinase domain profile. 357 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach3g00175 663 Pfam Protein kinase domain 360 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach3g00175 663 CDD STKc_IRAK 363 628 - -
Bach3g00175 663 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 432 639 - -
Bach3g00175 663 Pfam Malectin-like domain 70 212 IPR024788 -
Bach3g00175 663 PANTHER OS07G0107800 PROTEIN-RELATED 288 630 - -
Bach3g00175 663 Gene3D Phosphorylase Kinase; domain 1 329 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00175 Bach-Chr3 3497913 3503365 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00175 70 636 Receptor kinase-like Gene Family AT1G51790 40.986 1.72e-159 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Bach3g00175 Pkinase 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00175 - - pvu:PHAVU_005G162300g 669.077