Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00140 ATGAAGTGGGAAATGGAAATCCTCACACCAGCACCATATATCTCCAGCACCAACTGGGCCTTTGAAGAAAACAACAGAAGCACAAAATGGACAGCTGCAGAAAACAAACAGTTTGAGAATGCTCTTGCAGTTTACGATAAGGATACGCCGGATCGGTGGCACAAGGTGGCGGCAATGATTCCGGGGAAAACAGTGAACGATGTGATGAAGCAGTATAAAGAACTAGAAGTAGATGTTAGTAATATAGAAGCTGGTTTGATTCCAATTCCAGGTTATGGCAGTACTGCTTCTCCTTTCACTTTAGATTGGGTTAACACTTCTGGGTATGATGGGTTTAAGGGTATAGGTGGAAAGAGATCTTCAGCAGGGAGAGCACCTGAGCAGGAAAGAAAGAAAGGAGTTCCGTGGACAGAAGAGGAGCATAAATTGTTTCTATTGGGCTTGAAGAAGTATGGGAAAGGTGACTGGAGAAATATCTCACGCAATTTTGTTATTACTAGAACACCAACCCAAGTGGCTAGCCATGCTCAGAAATACTTCATAAGGCAACTCTCAGGAGGGAAGGACAAGAGAAGGGCTAGCATCCATGACATAACAACAGTTAACCTAAATGACACCACAAGAACTCCTTCTCCGACGAAAGATGGTGGCGGCGCCAGATCTAGTTCACCACCGCATTCTATGTTGCTCTCCCACCACCACCACCACCACCCTAATTCTCCTGCCACAACACCAAGAGCACAATTCCAATGGAATCAGCCAAATGCAGGGGTGGTCATGGGTGCACAAGAAAAAATGTTCATGTCGCCTTATGGGGTTAACACATATGGCCTTAAAATGCAGGGCCAATACCAAAATCTGCATAAAAGTGGTGCTGCTCTTCATGAATCTTCTTACTTACCACCTCAGACTCAAAACATGGTCTTCCAAACCCAAAGCTACTCCCATGCATGA 954 0.4497 MKWEMEILTPAPYISSTNWAFEENNRSTKWTAAENKQFENALAVYDKDTPDRWHKVAAMIPGKTVNDVMKQYKELEVDVSNIEAGLIPIPGYGSTASPFTLDWVNTSGYDGFKGIGGKRSSAGRAPEQERKKGVPWTEEEHKLFLLGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLNDTTRTPSPTKDGGGARSSSPPHSMLLSHHHHHHPNSPATTPRAQFQWNQPNAGVVMGAQEKMFMSPYGVNTYGLKMQGQYQNLHKSGAALHESSYLPPQTQNMVFQTQSYSHA 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00140 317 ProSiteProfiles SANT domain profile. 136 184 IPR017884 -
Bach3g00140 317 NCBIfam myb-like DNA-binding domain, SHAQKYF class 131 183 IPR006447 GO:0003677
Bach3g00140 317 Pfam Myb-like DNA-binding domain 135 180 IPR001005 -
Bach3g00140 317 Pfam Myb-like DNA-binding domain 29 73 IPR001005 -
Bach3g00140 317 ProSiteProfiles Myb-like domain profile. 128 180 IPR001005 -
Bach3g00140 317 MobiDBLite consensus disorder prediction 191 248 - -
Bach3g00140 317 FunFam transcription factor MYB1R1 134 185 - -
Bach3g00140 317 CDD SANT 29 75 IPR001005 -
Bach3g00140 317 ProSiteProfiles SANT domain profile. 25 80 IPR017884 -
Bach3g00140 317 SMART sant 132 182 IPR001005 -
Bach3g00140 317 SMART sant 26 78 IPR001005 -
Bach3g00140 317 MobiDBLite consensus disorder prediction 197 228 - -
Bach3g00140 317 ProSiteProfiles Myb-like domain profile. 22 76 IPR001005 -
Bach3g00140 317 CDD SANT 135 180 IPR001005 -
Bach3g00140 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 128 184 IPR017930 -
Bach3g00140 317 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 23 263 IPR043363 -
Bach3g00140 317 SUPERFAMILY Homeodomain-like 129 183 IPR009057 -
Bach3g00140 317 Gene3D - 134 184 - -
Bach3g00140 317 Gene3D - 16 89 - -
Bach3g00140 317 SUPERFAMILY Homeodomain-like 28 80 IPR009057 -
Bach3g00140 317 FunFam Transcription factor SRM1 22 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00140 Bach-Chr3 2651119 2652375 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach3g00140 Myb_DNA-binding 1.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00140 - - qsa:O6P43_013995 441.039