Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bach3g00131 | ATGTGGTTTAGAAAAGATGGCAGCAACAAAAGGAAAGAACAAGAAGAAGAGAGATCCAGACGCAGAGGTTTTACGCAACACGGTCCATCAAGAGAGATCGCTCGCCTGCCATCTACACCGATGATGTCATATTCCAGGAGATCAAGATATTCTCGTTCTCCTTCCCCATACAAGCGCTACAGGTCTGTCTCCAGGTCTTTATCAAGGTCAAGACGGTCAAGAAGCCTATCAAGTGATGCAGAGAATCCTGGCAACAATTTGTACGTGACAGGTTTGTCTCCTCGGATCACTAAGAGAGAACTGGAGAAGCATTTTGCAACGGAGGGAAAAGTGATAGATGTTCATCTAGTTGTTGATCCATGGACGAGAGAATCACGTGGATTTGGGTTTGTGACAATGGAAACTGTTGAGGATGCTGATCGATGCATAAAGTATATGGATCGCTCTGTCATTGAAGGGCGTGTCATCACAGTGGAGAAGGCCAGAAGGCGCCGGGGTAGAACTCCAACTCCTGGGAAGTATCTTGGTTTGAGGACTGTTCGTGGACGTCGCCGCAGTCCTAGTTATTCTCCTTACAGTCGCAGTCGGAGCCGTTCGCCATATTCCTCAGATCGTAGTAGGAGCCGTTCTTACTCTGGCAGTCCAAGGAGGAGGTCCTATTCCCCTTACCGTAGTGGACGCAGATCCTATTCTCCTTATGACAGGCGCCACCAGTCCTATTCTCGGTCTCGGTCTCCTTATAGTAGGTCACCTGTCAGTCGGAGGCGTGAGAGGTCATACTCCCCGTATGATTCAAGGCATGATTCACCTGATGATCACTACTATAGAAGGCACCGTTATAGGTCTGTGTCACCCGATGATCGCCACTACAGAAGGCATTATTATAGGTCCGTTTCACCTGAGGATCGCTATTATAGAAGGCACCGTTATAGGTCAGTTTCTCGAAGTGCCTCACCAAGGCGAAGGAGAAGTTCAAGGTACACTCCCAGCATCTCACCTGTGAGAAGGCGAAGCTCAAGAAGAAGCTACTCTCCAAGTGTTTCCCCTAGTCCACGGAGGAGTTCACGGCGGAGTAACTCTGGGAAACGTCGAAGTTACTCTATAAGTTCCAGTGTGAGTGCAAGTTCAAGGTCTGTATCAAGGTCTTTGAGTCGTGGATCTCCTTCGCCTTCAAGTTGA | 1179 | 0.4869 | MWFRKDGSNKRKEQEEERSRRRGFTQHGPSREIARLPSTPMMSYSRRSRYSRSPSPYKRYRSVSRSLSRSRRSRSLSSDAENPGNNLYVTGLSPRITKRELEKHFATEGKVIDVHLVVDPWTRESRGFGFVTMETVEDADRCIKYMDRSVIEGRVITVEKARRRRGRTPTPGKYLGLRTVRGRRRSPSYSPYSRSRSRSPYSSDRSRSRSYSGSPRRRSYSPYRSGRRSYSPYDRRHQSYSRSRSPYSRSPVSRRRERSYSPYDSRHDSPDDHYYRRHRYRSVSPDDRHYRRHYYRSVSPEDRYYRRHRYRSVSRSASPRRRRSSRYTPSISPVRRRSSRRSYSPSVSPSPRRSSRRSNSGKRRSYSISSSVSASSRSVSRSLSRGSPSPSS | 392 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bach3g00131 | 392 | SMART | rrm1_1 | 86 | 159 | IPR000504 | GO:0003723 | |
Bach3g00131 | 392 | CDD | RRM_SF | 87 | 159 | - | - | |
Bach3g00131 | 392 | Gene3D | - | 4 | 169 | IPR012677 | - | |
Bach3g00131 | 392 | MobiDBLite | consensus disorder prediction | 41 | 87 | - | - | |
Bach3g00131 | 392 | FunFam | Serine/arginine-rich splicing factor SR45a | 43 | 169 | - | - | |
Bach3g00131 | 392 | MobiDBLite | consensus disorder prediction | 161 | 280 | - | - | |
Bach3g00131 | 392 | MobiDBLite | consensus disorder prediction | 306 | 392 | - | - | |
Bach3g00131 | 392 | MobiDBLite | consensus disorder prediction | 250 | 280 | - | - | |
Bach3g00131 | 392 | PANTHER | TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED | 80 | 294 | - | - | |
Bach3g00131 | 392 | MobiDBLite | consensus disorder prediction | 323 | 392 | - | - | |
Bach3g00131 | 392 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 85 | 163 | IPR000504 | GO:0003723 | |
Bach3g00131 | 392 | MobiDBLite | consensus disorder prediction | 186 | 219 | - | - | |
Bach3g00131 | 392 | MobiDBLite | consensus disorder prediction | 1 | 87 | - | - | |
Bach3g00131 | 392 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Bach3g00131 | 392 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 87 | 156 | IPR000504 | GO:0003723 | |
Bach3g00131 | 392 | SUPERFAMILY | RNA-binding domain, RBD | 75 | 188 | IPR035979 | GO:0003676 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bach3g00131 | Bach-Chr3 | 2509535 | 2514756 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bach3g00131 | 65 | 167 | Eukaryotic Initiation Factors Gene Family | AT2G23350 | 33.333 | 2.11e-07 | 51.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bach3g00131 | - | - | gmx:100805126 | 236.498 |