Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00091 CTGAAATTTGGTGATTGAATGTCAATTATTTCTAAGTACCTCAACAGAAGAGAAGATCAAGTAAAATCATAATGAAGATAAGTTCGAATTTGAAATGAGTTTTGAAGTTTCTGCTGTCATTTGGGAGGCATTATTTCCTATTTTATGATTGATGAATTACAACAAGGAGAAGGGCTCCAACGCGAGGGTAATTGAATTTTCTCTAGAATCTGAAGATATGCAGTCCAAGTCTGAAACTGCTAATCGACTGAGGTCTGATCCATATACCTTTCAAACAGCCAATGTTTATTCTGAACCTTGGTGGCGTGATATTGGGTCTGGTGCAAATGCATCCAATTCATCCTCTCTAGAGGGCCCTAATGGGGATTCAGAATCCAATGAAGGCCAATCTTTGTCCAAAAGTGAGTTGAATGAGGAAGATGATGATGCCACTAAAGAGTCACAAGCTAATGCTCCTAATCAGTCCGGAAATTATGAGCAAGAACACCAAGGTATGCAGCATGCTTCATCATCTGCACCTTCAACACGTGATGAATGCCTTGTGCAAACTCCACAGCTTGAACTTGTTGGTCATTCAATTGCATGTGCTTCGAATCCTTATCAGGATTCGTATTATGGGGGGATGATGGCAGCTTACAGACATCAGCAGTTGGGATATCCTCCTTTTATGGGAATGCCTCATACCAGAATGCCTTTGCCACATGAGATGGCACAAGAGCCTGTTTATGTGAATGCCAAACAATACCAAGGAATTCTCAGGCGACGACAGGCTCGGGAAAAAGCTGAGCTTGAAAAGAAGCTAATAAAAGTTAGAAAGCCATATCTTCATGAATCTCGGCACCAGCATGCTATGACAAGGGAAAGGGGTACTGGAGGACGTTTTACAAAGAAAACTACTACAAAGGCTCCAAATCATTCGGGCAAGGAAAAAGATGCAAGTTCTAGTCCTGTTCTATCATCACAATCAATTAGTTCATCTGGTTCCGAACCTTTACACTCTGACTCTGCTGAAACCTAG 1018 0.4145 MNYNKEKGSNARVIEFSLESEDMQSKSETANRLRSDPYTFQTANVYSEPWWRDIGSGANASNSSSLEGPNGDSESNEGQSLSKSELNEEDDDATKESQANAPNQSGNYEQEHQGMQHASSSAPSTRDECLVQTPQLELVGHSIACASNPYQDSYYGGMMAAYRHQQLGYPPFMGMPHTRMPLPHEMAQEPVYVNAKQYQGILRRRQAREKAELEKKLIKVRKPYLHESRHQHAMTRERGTGGRFTKKTTTKAPNHSGKEKDASSSPVLSSQSISSSGSEPLHSDSAET 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00091 288 MobiDBLite consensus disorder prediction 259 288 - -
Bach3g00091 288 MobiDBLite consensus disorder prediction 224 288 - -
Bach3g00091 288 MobiDBLite consensus disorder prediction 52 129 - -
Bach3g00091 288 MobiDBLite consensus disorder prediction 227 244 - -
Bach3g00091 288 PRINTS CCAAT-binding transcription factor subunit B signature 190 212 IPR001289 GO:0003700|GO:0006355
Bach3g00091 288 PRINTS CCAAT-binding transcription factor subunit B signature 221 244 IPR001289 GO:0003700|GO:0006355
Bach3g00091 288 ProSiteProfiles NF-YA/HAP2 family profile. 187 247 IPR001289 GO:0003700|GO:0006355
Bach3g00091 288 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 189 244 IPR001289 GO:0003700|GO:0006355
Bach3g00091 288 SMART cbf3 186 247 IPR001289 GO:0003700|GO:0006355
Bach3g00091 288 MobiDBLite consensus disorder prediction 97 129 - -
Bach3g00091 288 MobiDBLite consensus disorder prediction 56 82 - -
Bach3g00091 288 Gene3D - 187 249 - -
Bach3g00091 288 MobiDBLite consensus disorder prediction 20 39 - -
Bach3g00091 288 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 43 284 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00091 Bach-Chr3 1540460 1543708 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00091 38 288 CCAAT-HAP2 Transcription Factor Family AT5G12840 50.758 6.16e-75 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Bach3g00091 CBFB_NFYA 1e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00091 K08064 - gmx:100808378 410.609