Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00057 ATGCTGGTGGCTCCAGTGTTATTTCAAGCATTTCAGGCAGTTCCTCACTTAGACCAGATCTCATACATTGGGATGGAAGGTCTCTTTTTCTCATACTACACTAATAATGGTCAAACTCTTGCAATGTACTCAAACTCTTCAATTTCGTATGGTTGGAGAGAAAAGACATACTATATCCAACCTGTGAACCGTGACACTGGAGAGTTTTATGACAAAGCTTTAACTCTTTTATCAAAACCTTCTATCAATGCAAGTTGGATTGAAGAAGCAGTAATTGATAGTTCATATGGATATGCCTCGTTGGGAACCAAGTGGAGCAATGGCCACGATCTTCTGTTACTTAGCTCAGCAAGAATCGCAAGAATAGGACTCATCTCTCTTGGGTTTCCAGTTACAGCAATAACTGATTTCATTACTCGCGTTGATCGTGAAGGGGCAAGCTTGTATTTGGGTACCAAAAATGGGACAGTTCTGGTAGAAGGGATCCCAAATATGCACATTATCTTTTCTGATGATGACAAGGCTTCCTTCAAGAGAATGAATGAGAATGGTGATCCAATGAGTGATGATGTGGGCTCTATCTCATGCAAGGATGAAGCTGCTCCGTCTGTTTTGAATATTCAAGATACAGACTACTCACTCCACTGCTCACAAATTGATATAATGGGAGTAAAACTGGTGTATGTTTTGGTTATCCCGCAAAGTGGACTAGTCCACTTCGCCCACAAGATTAGAAAGCAGGGAGTGGCATTACTGAGTGTAATGTTGATCATGATATTGATAGCTTTCTCTAGTTTTATATTAATTAGTGCAAGAGGTGCGAGGCGAGAGATGCATTTATGTGCTTCACTTATCAAACAAATGGAAGCCACTCAACAAGCAGAGAGAAAGAGTATGAACAAGAGTCTCGCTTTTGCTAATGCCAGCCATGATGTTCGTGCTTATCTTGCAGGCCTCACGGGTTTGATAGAGTTGTGCTATCAGGAAGCTATCCCTGGTTCAGAATTAGAGACTAATTTTAAACAAATGGATACTTGCACCAGAGACTTACTGGGACTACTGAATTCTATACTTGATACAAGCAAAATTGAGGCAGGAAAAATGCAGCTTGACAAAGAGGAATTTGATCTGTCCCAAATTTTGGAGGATGTGGTTGATTTATACCATCCTGTGGCAATGAAGAAAGGTGTGGATCTTATATTAGACTCTTGCAATGGTTCTGTCATCAAATACTCGCGAGTGAAAGGAGATAGGGGAAAGCTTAAACAAGTATTTTGTAATTTACTGAGCAATGCTGTTAAATTTACTGAAAAAGGGCACATAATAGTTCGAGCATGGGCTCAGAAGCCAGGTTTCCAGAACTCAATAATTGCTGCTTCTGATCGATATGGATGGGTCAAAAATTTGACTTCCTTATTTGGTAAGAAAGATAAAGGAAGGGATGATATAGAAGCCATGAATTCAGTCCAACAAGATTTGAATTATATGGAATTTGTGTTTGAAGTTGATGACACAGGCAAAGGAATTCCCAAAGACAAACAGAAATCTGTGTTTGAGAATTATGTTCAGGTCAAAGAAACAGGTCTTGGACAAGGAGGTACTGGTTTAGGACTTGGTATTGTTCAGTCTTTGGTGCGGTTGATGCATGGAGACATTGGAATTGTGGACAAGGACAATGATGAAAAAGGAACATGCTTTAGGTTCAATGTTCTTCTTTCTGTATCAGAGATGGTCTCTGCAGGTAGCACAAGGGAAAGCACTAGCCCAACAGGTGACAGAAATCAACCTTTGGGAGTGGGACTAGTAATTCCCAGTCCTAGTTCTGGTTCAAGCATTCGTTCTTATAGTCCTAGGTTTGCTATTGGCACTTCTAGTCCTAAGCCAGAGGCTTCTTGTGTTGTTCTCTTGATTCAAGACAAGGAGCGGCGAGAGACAACTAAAAGATTCATGGAGACCTTGGGGATCAGAGTAAAGGTTGTCAAGCAATGGGAACATCTGTTTTATACTCTCAACAGGATCAAACAAAAGAGTAACCGCCTTAGCCCAAGTTTTTCAGCGGGATCAGAGATGGGTTCATGCTCTACTTCTAGAAATTTTAGACGAAAGGATTTTCCTTTGAGTTCTATGGATGGAACTGAACAAACAACTTCAGTTTTCAAGAAGACCAATGTTGGATCTACTCGGGGTTTTGTTCTAATTGTAATTGATGCATTTGCAGGACCATTTTCAGAGATTTGTAAGATGATATATGGTTTTAGAAAAGGCCTTCGCAATCCTTGTAAGGTTGTTTGGTTAGATAAGGGACTTGTGCGCAGTGTTAATTTCAAAGACCTTGATGAGGATATGTTTGATCCAAATGACCTTGTCATAACTAAACCCTTTCATGGTTCTCGTTTGTTTGATGTTATAAAGCTTCTTCCAGAATATGGTGGTACCTGGCAAAGTAGCTCTAGTAGAACAAACAGAGAAACTGCTCATAACATAGCTATTAGAGATTCTGGCCTGCCAAAATACCCAAGCTTGGACAAAGCGAAGAATTCTCCAATTTATGGAAGCCCAGTTCATCAAGAACAACATGGTGTCTCAAGCTTTGACAAACCCTTGAGTGGTAAGAAATTTCTACTAGTTGAGGACACTCAACTCTTGCGTAAGATAGCTTTAGCCACTCTGGTGCGGCTTGGTGCAAGTGTTGAGCAATGTGAGAATGGAGCAGAAGCTGTAAGGCTAGTTGAGAAAGCTCTAACTGGGGATTTTCTCAATTTTCCCTATGATTATATCATTATGGATTGTGAGATGCCAGTAATGAATGGTTTTGAGGCAACAAGGAGGATAAGGGAGATGGAGAAACCCTTTGGGATTCACATTCCTATTATTGCATTAACTGCTCATACCACTGGGAGGGAGGCAAGCATGACCATTGCAGCTGGAATGGACGTTCATTTGGACAAACCCATTACTAAAGAACGTTTATTAGAAGCCATTAGATATATACACAATAAATAA 3003 0.4033 MLVAPVLFQAFQAVPHLDQISYIGMEGLFFSYYTNNGQTLAMYSNSSISYGWREKTYYIQPVNRDTGEFYDKALTLLSKPSINASWIEEAVIDSSYGYASLGTKWSNGHDLLLLSSARIARIGLISLGFPVTAITDFITRVDREGASLYLGTKNGTVLVEGIPNMHIIFSDDDKASFKRMNENGDPMSDDVGSISCKDEAAPSVLNIQDTDYSLHCSQIDIMGVKLVYVLVIPQSGLVHFAHKIRKQGVALLSVMLIMILIAFSSFILISARGARREMHLCASLIKQMEATQQAERKSMNKSLAFANASHDVRAYLAGLTGLIELCYQEAIPGSELETNFKQMDTCTRDLLGLLNSILDTSKIEAGKMQLDKEEFDLSQILEDVVDLYHPVAMKKGVDLILDSCNGSVIKYSRVKGDRGKLKQVFCNLLSNAVKFTEKGHIIVRAWAQKPGFQNSIIAASDRYGWVKNLTSLFGKKDKGRDDIEAMNSVQQDLNYMEFVFEVDDTGKGIPKDKQKSVFENYVQVKETGLGQGGTGLGLGIVQSLVRLMHGDIGIVDKDNDEKGTCFRFNVLLSVSEMVSAGSTRESTSPTGDRNQPLGVGLVIPSPSSGSSIRSYSPRFAIGTSSPKPEASCVVLLIQDKERRETTKRFMETLGIRVKVVKQWEHLFYTLNRIKQKSNRLSPSFSAGSEMGSCSTSRNFRRKDFPLSSMDGTEQTTSVFKKTNVGSTRGFVLIVIDAFAGPFSEICKMIYGFRKGLRNPCKVVWLDKGLVRSVNFKDLDEDMFDPNDLVITKPFHGSRLFDVIKLLPEYGGTWQSSSSRTNRETAHNIAIRDSGLPKYPSLDKAKNSPIYGSPVHQEQHGVSSFDKPLSGKKFLLVEDTQLLRKIALATLVRLGASVEQCENGAEAVRLVEKALTGDFLNFPYDYIIMDCEMPVMNGFEATRRIREMEKPFGIHIPIIALTAHTTGREASMTIAAGMDVHLDKPITKERLLEAIRYIHNK 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00057 1000 SMART HKATPase_4 416 574 IPR003594 -
Bach3g00057 1000 Gene3D - 368 579 IPR036890 -
Bach3g00057 1000 PRINTS Bacterial sensor protein C-terminal signature 498 512 IPR004358 GO:0016310|GO:0016772
Bach3g00057 1000 PRINTS Bacterial sensor protein C-terminal signature 532 550 IPR004358 GO:0016310|GO:0016772
Bach3g00057 1000 PRINTS Bacterial sensor protein C-terminal signature 516 526 IPR004358 GO:0016310|GO:0016772
Bach3g00057 1000 Pfam Response regulator receiver domain 874 995 IPR001789 GO:0000160
Bach3g00057 1000 ProSiteProfiles Response regulatory domain profile. 872 998 IPR001789 GO:0000160
Bach3g00057 1000 MobiDBLite consensus disorder prediction 581 611 - -
Bach3g00057 1000 CDD REC_hyHK_CKI1_RcsC-like 873 994 - -
Bach3g00057 1000 SMART REC_2 871 994 IPR001789 GO:0000160
Bach3g00057 1000 ProSiteProfiles Histidine kinase domain profile. 307 574 IPR005467 -
Bach3g00057 1000 Gene3D - 287 367 - -
Bach3g00057 1000 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 288 368 IPR036097 GO:0000155|GO:0007165
Bach3g00057 1000 SMART HisKA_10 300 366 IPR003661 GO:0000155|GO:0007165
Bach3g00057 1000 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 355 570 IPR036890 -
Bach3g00057 1000 Gene3D - 853 999 - -
Bach3g00057 1000 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 416 572 IPR003594 -
Bach3g00057 1000 PANTHER TWO-COMPONENT HISTIDINE KINASE 52 995 - -
Bach3g00057 1000 SUPERFAMILY CheY-like 869 998 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00057 Bach-Chr3 943973 948475 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00057 3 1000 Histidine Kinase Gene Family AT2G47430 41.856 0.0 738
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bach3g00057 HATPase_c 1.9e-24 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00057 - - qsa:O6P43_007242 1125.54