Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00053 ATGGGACCTATGTTTCAAGAAGGATCATCTTCTGTAACTTCATCACCTCTACAGTTCTTCTCGATGATGTCACTTTCACCTAGCTTAGGATCACCATACCCATGGATGAGAGAACTTAAATCCGAGGAAAGGGGTTTGTACTTGATCCACTTGTTGCTCACTTGTGCAAATCATGTAGCTGTTGGTAGTCTTGAGAATGCAAATAGTGCCCTTGAACAAATTTCCCAGCTTGCCTCCCCTGATGGGGATACCATGCAGCGAATTGCTGCATATTTTGCTGAAGCACTTGCCGATAGGATACTTAAAACATGGCCTGGTCTTCACAAGGCTCTCAATTCTACTAGAATAGTTATGGTTTCTGAAGAAATTCTTGTCCAGAAACTGTTTTTTGAGTTGTTCCCATTCTTGAAGGTAGCATTTGTGCTAACAAATCAGGCTATCGTTGAAGCAATGGAAGGGGAGAAGATGGTTCATATAATTGATCTCAATGCTGCTGAACCTGCACAGTGGATTGCACTCCTGCAAGTGTTGAGTGCACGTCCTGAAGGCCCTCCACATTTGAGAATTACTGGGATTCATCAACAGAAAGAGATTCTTGAGCAAATGGCACATAGACTCACTGAAGAAGCAGAGAAATTGGATATTCCCTTCCAATTCAATCCTGTGGTCAGCAAATTAGAGAACCTTGATTTTGATAAACTTCGTGTGAAAACTGGGGAGGCACTGGCAATCAGTTCTATTCTCCAACTGCACTCCCTTTTGGCATGGGAGGATGAAGCCTTGAGGAGAAAATCTCCTCTCCTGTCAAAAAGCTCCAATGGAATTCATCTACAAAGAGTCCTGCCAATGAACCAAAGCACATTGGGCGATTTGCTGGAGAAAGACATGGTTAATGGGTATAGCCCAAGTCCTGACTCAGCCTCATCATCACCGGCATCTATAAATGCTTCGATGAGTATGGAGAGCTTTCTCAATGCCTTGTGGGGTTTGTCACCAAAGATCATGGTTGTTACAGAACAAGACTCGAATCATAATGGTTCTACTCTTATGGAGAGACTGCTAGAAGCTTTGTATTCTTATGCTGCCCTATTTGATTGTTTGGAATCAACTGTCTCAAGAGCATCGATGGAGAGATTAAAGGTAGAGAAGATGCTTTTTGGTGAGGAAATCAAGAACATTATAGCATGTGAAGGAGCTGAAAGAAAGGAAAGACATGAAAAGCTTGAGAAGTGGCTCCAAAGGCTTGATTTAGCCGCGTTTGGGAATGTGCCTTTGAGCTATTATGGTATGTTGCAGGCAAGGAGGTTACTACAGAGCTATGGTTGTGAGGGGTATAAGATGAGGGAGGAAAATGGTTGTGTAGTGATTTGCTGGCAGGATAGGACCCTGTTTTCCATATCAGCATGGAGATCTAGGAAGTAG 1422 0.4304 MGPMFQEGSSSVTSSPLQFFSMMSLSPSLGSPYPWMRELKSEERGLYLIHLLLTCANHVAVGSLENANSALEQISQLASPDGDTMQRIAAYFAEALADRILKTWPGLHKALNSTRIVMVSEEILVQKLFFELFPFLKVAFVLTNQAIVEAMEGEKMVHIIDLNAAEPAQWIALLQVLSARPEGPPHLRITGIHQQKEILEQMAHRLTEEAEKLDIPFQFNPVVSKLENLDFDKLRVKTGEALAISSILQLHSLLAWEDEALRRKSPLLSKSSNGIHLQRVLPMNQSTLGDLLEKDMVNGYSPSPDSASSSPASINASMSMESFLNALWGLSPKIMVVTEQDSNHNGSTLMERLLEALYSYAALFDCLESTVSRASMERLKVEKMLFGEEIKNIIACEGAERKERHEKLEKWLQRLDLAAFGNVPLSYYGMLQARRLLQSYGCEGYKMREENGCVVICWQDRTLFSISAWRSRK 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00053 473 ProSiteProfiles GRAS family profile. 39 470 IPR005202 -
Bach3g00053 473 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 42 465 IPR005202 -
Bach3g00053 473 Pfam GRAS domain family 48 470 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00053 Bach-Chr3 847080 848501 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00053 1 473 GRAS Transcription Factor Family AT1G50420 69.835 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bach3g00053 GRAS 4e-140 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00053 - - cave:132164091 798.119