Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00050 ATGGAATTCGTGGGCAAAACTGTCCAGAAAGAGGTCAAGGAGGGTGGGATTGTCTCTGGAACGGTGAAATCTTACGACCCATCATCTGGATTCGTGGAGATCGACTACGAGGATGGTGATTCAGAAGAGTTGGAATCGTCAGAATTAGCTTCTCTTTTGAAAGGTGAACCGGAGCTTGACAGGGTGAAATCCCGGGTCGGAAGGAAACCCAAGAAGCGTCGTCGAGTGGAGAGGAAGCTTGAGAACAGAGGAGGTGATTCAGGTAATGAAAGTGAGAATTCTGAATTAAGCAGGGTTTTAGAAGAACAAGCATGTGTTAGTGAGAATTTGATAGGAAATGGTGAGTTAGATTGTGGGATGAAGAGAAGCCCGGAAATGGTAAATTGGATTGGAGGGAATAGGATTTGTAGCATGGAAATTAGTGGCTATGCGAATAGGAGTGCCAGCTCGAATGGGAGTGATGAAACTGTAGGAAAGGGAAGTGGGATTGAAGGGGATTCTACTAATGGGAATTCGGAGAAATTTGGTTATGTAAAAGATGGGTTGGATTTGAATGCTGGTATTAACCTGAACGAGGATTTAAATCTGAATGATGGCTGGAGTTCACTCGTTAATTCTGAGGATAGTTTGAAGAGAAGAGATTCTATCGATTTAAATTTGGATGTAAGAGATGAATTTGATGTCAGCCTGAATTTGTCTGATGCGGGCTGTTCAGCGCTGGTAACAATGAAGCGGGAATGTGATTTTGATTTGAATGTGGAGGTATATGATGAAGATAATGAAGTTGACGGTGATGCTGGTGTGGGTGTACAAGGGGAAGTTAAGGGAGTTGCTGGTGAAGATGTACCTGAGGAAGTTAAGGGATCTGATGGAGATGCACAAGAGGAAGTTAAGGGATCTGATGGAGATGTAAAAGAGGAAGTTAAGGGATCTGATGGAGATGTAAAAGAGGAAGTTAAGGAAGCTGATGGACATGTACAAGAGGAACATAGGGAAGCTGATGGTAATGCTGACGGAGGTGTACAAGAGGAAGTTAAGAAAGGTGATGGCGAGGGACAATCTTATATAGGTGATTTGTTTGGTGAGAGGGGACTAAGCCAAGACGGCGAGGCAGAAATTAATCAGAAATCTATGGAAGAAGATACTATTAATGGGAAGTTGAATGATATCACTAATGATATCCGGTTGAAGGTAATTCATGGCTCTCCGGAGCATGGAGCCAAGGATTCTTCAAGTTTGATTGAGGGAAAGGAAGATGGTTTGTACAGTAGAAATGTAGTGGCTGTTGATCCTCATGGGGTGTCAAATGCAATTTCAGTTAAGGTTTGTGATTCTATGGAGGTTCGGCAAGAAGATAATCCTTCTCAAACTGGTGTTGCCATAATTCATGAATGTCAAGATGATCCAGGAAGTTCATGCAAACAAGTAAGCAACAGGAGGAAGAGGAGAAAATTATCTAATAACACAGAAACTACTACTGAAACAGTTTTGAGGAGGAGTTCTCGCAGGGCATCTGCTAGACAACATGTTTCCAGCACCATGGCTTTGCATGTGACTTATGATCCATCGTTGTCCTCTGGTCTGGGTGCCTTAGCCGAAGATAAACCAGTTGTCTCTGGTTCTGAGAAATGTGAACAGTGTGATGTTCTTCCATCAAAGCTGCAGTTACCCCCTTCTTCTCAAAATTTGAATTTAGGCAATATTCCTGTACTTGAGTTATTTTCTATTTATGCCTGTTTAAGATCATTCAGTACTATATTATTTTTGAGTCCATTTGACTTGGAGGATTTTGTAGCAGTGCTGAAGTGTGAATCTCCTAGTGTATTATTTGACAACATTCATGTTTCTATTCTGCAAACTCTAAGAAAGCACTTGGAATACCTTTCTAATGATGGTTGCCAATCTGCATCCCATTGCCTGAGGAATCTTAACTGGGATATGCTGGACCTGGTTACATGGCCCATTTTCCTTGCTGAGTACCTTCTAGTTCATGGTTCAGTTTTCAACTCCGGTTTTGATCTTAGCCACTTGATGTTCCTAAGTGATTATCACAAACAACCTGTATCAGTGAAGGTTCATATTCTTCAATGCCTTTGTGATGATATGATGGAAGCAGAAACTATAAGGTCAGAGCTTAACAGAAGATCGTCAGTAACTGAGACTGATATGAACTTTGATCAGAATATGTATTCTGACATTTCCAAGAAAAGGAGGGCTCTAATGGATGTGTCTGGTGGCTCTTGCTTGACTGAGGACATTGTTGATGACACAACTGATTGGAACAGTGATGAGTGCTGTCTTTGCAAGATGGATGGAAATTTAATATGCTGTGATGGTTGCCCTGCTGCATTCCACTCAAGGTGTGTAGGAGTTGCTAACGAACATCTCCCCGAAGGTGACTGGTATTGCCCGGAGTGTGTAATTGCCAGACATAATCCTTGGATGAAACCACTAAAGTCACTTCGAGGAGCAGATCTGTTAGGAATTGATCCTCATGGTCGTCTTTATTTTGACTGCTGTGGTTACCTGTTAGTGTCAGATTCATCTGACATAGGATCAATTTTCAGTTACTACCACAGAAATGATCTTAATGTTGTACTTGAAATGCTGAAGTCTGCAGATACTGTCTATGGTGACATATTGATGGCGATCTATAATCACTGGGATATTGCTGTCAACATAAATGCAGGGATTGCTAACTTGTATGTCTTAAATCAGAGTGCCTGCAAAAACATGCATGCGAAGGGAGAATATTCTGCCCTATGTACATCCTTACCACCTTTTTCATCTTTAGAAACATGCTTGAATGGGAATGAGGTGGATAAGCATAGAAAACTTGAAGAAAATTCAAATATTGGATGTCATGTTCATCTTGGCCAAGAGTTTCCAAAAGCTGGAAACCGATTAGATTCAATGACAACAATAGAAAGTCCTTGTATTGCTTCTGAAGCATCAGGTGAAACCACACAATTGAGATCAAGTATTGAGAACCTTCAATCACATAGGCCTTATGATTTCAATAGATCTGATGAGTCTTTGAATCCGTCAGCAGCAAAACACCAACCAGTTGGTGACTGTTCTTTGACATCTTCCAGCTTAGATGTGAGAGATGGAAAATTCATATCTGCTAATGGTGATGCTCCTGAAGTTCCTTATGGGACTGATTACATAAACTATTACAGCTTTGCTCGAACAGCCTCTTTAGTTGCAGAGGAATTGATGTGTAAAAGTCCTGAAAAAATAAACAAAAAGGTTATAATGTCTGAAGAAGACATAATTTCGGAGCAAGGAAAGGCCATTATGAAGAAATCTACAAACTTTTGTTGGCCAAGTATTCAAAACTTAAATACAGATGCCCGGAAAGAAAAATGTGGTTGGTGCTTTTATTGCAAGGGTCCAAATGATGACAGGGATTGCCTGCTTAATGCTGTGGTAGGTTCTGTTAGGGAAGTGTCTAAAAGTAATGTAAAAGGGCTTCAACCTAGGAAGAACCAGAATGGTCATCTACGAGATGTCATTAGCCAAATTCTTTCCCTTGAGGATCATTTAGGTGGGCTTCTGTCAGGTCCATGGTTGAATCCCCATCATAGTAAGCTCTGGCGTAAAGATCTTCTGAAGGCATCTGATGTTACTTCTGTTAAACGTTTATTGCTCACGTTGGAGCTAAATTTGCAGCGTCGTGCACTTTCAGCTGATTGGTTGAAACATGTGGATTCTGTTGTTACTATGGGTTCAGCTTCTCATATTGTGGCCAGTTCCTCACGCACATCCTCAAGGCTTGGTATTGTTAGGAAAAGGGCTAGATATTCGGATATTGAGTCCAACTCTTCTTCAAATACTACCAGCGGTTTGGGAATATATTGGTGGAGAGGTGGTAGGGTTTCCCGTCATTTGTTTAATTGGAAGGTCTTGCCTCGCACCTTGGCTGCAAAGGCTGCTAGACAAGCTGGGTGTACAAAGATATCTGGTATATTATATCCAGAAAATTCAGATTTTGCGAAGAGGAGCAAGTATGTTGCTTGGCGAGCTAGTGTGGAGACATCAACAAGTGTTGAGCAGCTTGCTCTCCAGGTTAGAGAGCTTGATTCTAACGTCAGGTGGCATGATATTGAGAATACACATGTCCTATGTGTGTTAGACAAGGAATCCAGAAAATCAATCAGGCTGTTTAAAAAGGCAATTGTACGCAGGAAACACACTGAAGGGGAATCTGTAAAATATCTTCTTGATTTTGGGAAGAGAAGGGCTATTCCAGATATTGTTATTCGACATGGTTCTTTGTTGGAACAATCCTCTAGTGAGAGGAAGAAATATTGGCTGGATGAGTCTTATGTTCCCTTGCATCTTCTAAAGAATTTTGAGGAAAAAAGAATAGCCCGCAAGTCTAATGAAACAAAATCAGAAAAATCTCTTCAAATTGATAGAGGAAATAAGAGGGTTCCTCATCAAAGGGGATTTTCATATTTGTTTTCTAGATTGGACAAATTGGATTATCATCAGTGTGGACAGTGCAACAGAGATGTTTCAATCAGGGAAGCTGTGACCTGCCGAATTTGCGAAGGATATTTTCACAAGAGGCATGTTAAGAAATCCGGTGGCACAGGTGCTACTGAATGCACATATTCTTGTCGAAGATGCCAAGAGGGGATGCATGTAAAGACCAATGCTAAAAGAAGGAAAGTTGACCCAAAATTAGGAAAGGTTCAATCCCAAAAATGTAAAAAGGCTCCACTGTGCAGATCAGCAAAAGGTCGAGGCAGTGAAAAGTCATTAAGCAAGGGGCGGCAAGTAAAATCTAGAAATAAAAAAAATGTCCCTCCAAGTATGCCACTTCGCCGTTCTGCTAGGAATGCTAAATGCTTGTCTCTGCAAAATAAAAGGAAGGGGGGACGCAAAAAGGGAAAGAAAAGTAAACCAAAGAAGGTGGCATGTAGAAAGTCCAAGGAAAATTCTGCTGAATGTAAGAAATCTGCTGTAAATGCTCTGCATAAGAAACGGACACATGTCTATAACAGCTACTGGTTGAATGGTCTTCGGTTGTCTAGAAAGCCAAATGATGAACGAGTGGTACTGTTCAGTGAGAAAAAGCATCTTGCACCGTGTGAAGATTTTTCTGGCACATTTGATCATCCTAAATGCCAGATTTGTTGTGGAGATGGATGTACTTTAAACTATATTGCTTGTGAAATCTGTGGAGAGTGGTTTCATGGGGATGCTTTTGGACTCACTATAGAGAATGTCAGACAACTTATTGGATTTAGGTGTCATGTCTGTCGTAAAAGAGCCACTCCAATCTGCCCCCATATGAAGAGTGATGCATTGTCTCCTGTTGAAAGCAATTCTGCAATTGAGTGCACAGAAGAAATATCTAATCCTGTTCCACCTCAACCTTTAAGTGAGATCCCATGCAATTAA 5415 0.4102 MEFVGKTVQKEVKEGGIVSGTVKSYDPSSGFVEIDYEDGDSEELESSELASLLKGEPELDRVKSRVGRKPKKRRRVERKLENRGGDSGNESENSELSRVLEEQACVSENLIGNGELDCGMKRSPEMVNWIGGNRICSMEISGYANRSASSNGSDETVGKGSGIEGDSTNGNSEKFGYVKDGLDLNAGINLNEDLNLNDGWSSLVNSEDSLKRRDSIDLNLDVRDEFDVSLNLSDAGCSALVTMKRECDFDLNVEVYDEDNEVDGDAGVGVQGEVKGVAGEDVPEEVKGSDGDAQEEVKGSDGDVKEEVKGSDGDVKEEVKEADGHVQEEHREADGNADGGVQEEVKKGDGEGQSYIGDLFGERGLSQDGEAEINQKSMEEDTINGKLNDITNDIRLKVIHGSPEHGAKDSSSLIEGKEDGLYSRNVVAVDPHGVSNAISVKVCDSMEVRQEDNPSQTGVAIIHECQDDPGSSCKQVSNRRKRRKLSNNTETTTETVLRRSSRRASARQHVSSTMALHVTYDPSLSSGLGALAEDKPVVSGSEKCEQCDVLPSKLQLPPSSQNLNLGNIPVLELFSIYACLRSFSTILFLSPFDLEDFVAVLKCESPSVLFDNIHVSILQTLRKHLEYLSNDGCQSASHCLRNLNWDMLDLVTWPIFLAEYLLVHGSVFNSGFDLSHLMFLSDYHKQPVSVKVHILQCLCDDMMEAETIRSELNRRSSVTETDMNFDQNMYSDISKKRRALMDVSGGSCLTEDIVDDTTDWNSDECCLCKMDGNLICCDGCPAAFHSRCVGVANEHLPEGDWYCPECVIARHNPWMKPLKSLRGADLLGIDPHGRLYFDCCGYLLVSDSSDIGSIFSYYHRNDLNVVLEMLKSADTVYGDILMAIYNHWDIAVNINAGIANLYVLNQSACKNMHAKGEYSALCTSLPPFSSLETCLNGNEVDKHRKLEENSNIGCHVHLGQEFPKAGNRLDSMTTIESPCIASEASGETTQLRSSIENLQSHRPYDFNRSDESLNPSAAKHQPVGDCSLTSSSLDVRDGKFISANGDAPEVPYGTDYINYYSFARTASLVAEELMCKSPEKINKKVIMSEEDIISEQGKAIMKKSTNFCWPSIQNLNTDARKEKCGWCFYCKGPNDDRDCLLNAVVGSVREVSKSNVKGLQPRKNQNGHLRDVISQILSLEDHLGGLLSGPWLNPHHSKLWRKDLLKASDVTSVKRLLLTLELNLQRRALSADWLKHVDSVVTMGSASHIVASSSRTSSRLGIVRKRARYSDIESNSSSNTTSGLGIYWWRGGRVSRHLFNWKVLPRTLAAKAARQAGCTKISGILYPENSDFAKRSKYVAWRASVETSTSVEQLALQVRELDSNVRWHDIENTHVLCVLDKESRKSIRLFKKAIVRRKHTEGESVKYLLDFGKRRAIPDIVIRHGSLLEQSSSERKKYWLDESYVPLHLLKNFEEKRIARKSNETKSEKSLQIDRGNKRVPHQRGFSYLFSRLDKLDYHQCGQCNRDVSIREAVTCRICEGYFHKRHVKKSGGTGATECTYSCRRCQEGMHVKTNAKRRKVDPKLGKVQSQKCKKAPLCRSAKGRGSEKSLSKGRQVKSRNKKNVPPSMPLRRSARNAKCLSLQNKRKGGRKKGKKSKPKKVACRKSKENSAECKKSAVNALHKKRTHVYNSYWLNGLRLSRKPNDERVVLFSEKKHLAPCEDFSGTFDHPKCQICCGDGCTLNYIACEICGEWFHGDAFGLTIENVRQLIGFRCHVCRKRATPICPHMKSDALSPVESNSAIECTEEISNPVPPQPLSEIPCN 1804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00050 1804 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 756 810 IPR013083 -
Bach3g00050 1804 MobiDBLite consensus disorder prediction 1579 1648 - -
Bach3g00050 1804 ProSiteProfiles DDT domain profile. 567 627 IPR018501 -
Bach3g00050 1804 MobiDBLite consensus disorder prediction 1625 1643 - -
Bach3g00050 1804 MobiDBLite consensus disorder prediction 463 509 - -
Bach3g00050 1804 CDD PHD2_CHD_II 765 806 - -
Bach3g00050 1804 MobiDBLite consensus disorder prediction 276 343 - -
Bach3g00050 1804 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1707 1765 IPR013083 -
Bach3g00050 1804 SMART testlast3 567 627 IPR018501 -
Bach3g00050 1804 Pfam PHD-finger 765 807 IPR019787 -
Bach3g00050 1804 SUPERFAMILY FYVE/PHD zinc finger 1711 1764 IPR011011 -
Bach3g00050 1804 MobiDBLite consensus disorder prediction 998 1025 - -
Bach3g00050 1804 SUPERFAMILY FYVE/PHD zinc finger 747 810 IPR011011 -
Bach3g00050 1804 ProSitePatterns Zinc finger PHD-type signature. 765 806 IPR019786 -
Bach3g00050 1804 MobiDBLite consensus disorder prediction 1555 1574 - -
Bach3g00050 1804 MobiDBLite consensus disorder prediction 1555 1569 - -
Bach3g00050 1804 MobiDBLite consensus disorder prediction 145 174 - -
Bach3g00050 1804 SMART PHD_3 1712 1759 IPR001965 -
Bach3g00050 1804 SMART PHD_3 764 807 IPR001965 -
Bach3g00050 1804 MobiDBLite consensus disorder prediction 25 96 - -
Bach3g00050 1804 Pfam DDT domain 571 623 IPR018501 -
Bach3g00050 1804 ProSiteProfiles Zinc finger PHD-type profile. 762 809 IPR019787 -
Bach3g00050 1804 MobiDBLite consensus disorder prediction 278 343 - -
Bach3g00050 1804 PANTHER PHD FINGER FAMILY PROTEIN 2 1764 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00050 Bach-Chr3 752031 766287 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00050 1 323 PHD Transcription Factor Family AT5G12400 32.635 4.48e-23 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Bach3g00050 DDT 3.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00050 - - gmx:100800973 1988.39