Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00046 ATGGAATACCAGAGCGAGGGCAAAGCCACAGCATCAGCTTTCAACCCTTTTCTTTCTCTCTGCAACACTGGTACTATGGAGATATCCTTGTTAAAGTTTCTTGTTAATGGCATATCCTCATATTTGCATTTACCATATACTGGGAATGTGAATTCAGAACCTGTCTCAAAGTATTACCAGAAGGCAGAGGAGATACTTAAGCTGATAAAGCCTATAATTGAGGCGATTGATAATTCTGATTTAGCTTCTGATGAAGTGCTTACTGCTATAATTGAGGAACTGGGTCAGCCTGTTGATGAGTTGAGGGAGCTTATTGAGAGCTGGCATCTATTGTCTAGCAAAGTTTATTTTGTTATGCAAGTTGAGACCTTGATATCTAGGATTTGGAATTCAGCACTCAAAATGTTCCAGAAGCTGAAAGATTTCCATCAGTGCCTCCCTGATGAATTGAGCTCTGTGGATCTTGAGCATTATGTGCAGAAACTCAAGCATTTGGGGCATGAAGAAACATCATCGGTCATTAAAGAAGCTATTAGGGAACAAATGGAATCTGCAGGGCCTAGTTTGGATGTCCTGGCAAAACTTGCAGACGTTCTGGGTCTGAGGTCTAACCAAGAGGTTCTGATTGAGGCTGTGGCTCTTGAAAAGTTGAAGGAGAATGCGGAACAAAATGAAAAGACTGCTGACGCGGAATATATTGACAAATTGATTGCTCTTGTAACCCGTATGCATGAGCGTCTTGTTATGCTTAAACAAGAACAGAGCAGTTGTCCAGTTCCTGTGCCTACTGATTTTTGCTGTCCTCTCTCTTTGGAGTTGATGACAGATCCAGTCATTGTGGCGTCAGGGCAAACCTATGAGCGTTCTTTTATTAAGAACTGGATTGATCTTGGGCTCACTGTTTGTCCAAAGACACGTCAAACTCTGGCTCACACCAATTTAATACCTAACTACACTGTAAAGGCACTAATTGCAAACTGGTGTGAATCAAACAATGTCAAGCCAGTTGATCACATAAAACCTATGAACTTAAGCCAAGCGTCTTCCATTCATGGCCAACAGCCATCCTCACCCGAAGCAGCTCGTTCTCAGTCTTTCAACTCACCTGGTAAGAACCTAACATCTTCTGGTGGAATTCACCGAGAGGGAACATCACCATTGCATCCCCGTTCAATTTCTGAAGGTTCCTTAAGTGTCATGGCTAATGGGCAGAGTTTGGATATTGCAAGAGTATCACTGACAGGTTCTGATGACAGATCTGTTAGCTCAGATGAAAAGAGTGGGGATTCAGTTGGTCAGCCCTCAATGTCACCATCTAGAAGGGAATCTTCCAACTTAGAACAGTCTCAGACCCATGTTAGAACTGCTTCCAATTCCAGTTCACTTTCAAATGGCAATATTCCTCAAGGAACAGAGGGGGATGGAAACAGTGCATCTCAGCTGTCAATGGATCCTGGCTATGATAGAGATTCTTCTGGGGAAGTAAATCCAGGGCCAGAGGCTGCTGTTACTGCCACCACAACTGCTCCACAAAGAGAACCTGAGCTCTCACAACGATTTTTAGAGACTAGAACTCGAACCCAGTCCATATGGCGGCGGCCATCTGAGAGGTATGTTCCTAGGATTGCGTCTTCTCCTGCTATTGAGACAAGAGCTGATCTTTCTGCTATTGAGACCCAAGTTCGGAAATTAGTTGACGAGTTGAAAAGCCCCTCTCTTGATGCTCAAAGAGATGCAACAGCAGAGCTCCGACTTCTTGCTAAGCACAATATGGATAATCGGATTGTGATTGCAAATTCTGGAGCTATTAGCTTATTAGTTGAGTTACTACAATCAAATGATGCAAACATCCAGGAAAATGCTGTTACATCGCTTCTCAACTTATCAATTAATGATAACAATAAAACTGCAATTGCAAATGCTGGTGCAATTGAGCCTCTGATTCATGTCCTTGAGACAGGGAGCCCAGAAGCCAAGGAAAATTCAGCTGCCACACTTTTTAGCTTATCGGTGATTGAGGAAAACAAGATCAGGATAGGGAGGTCTGGGGCAATTAGACCACTAGTTGATTTATTAGGGAATGGAACGCCTAGGGGGAAGAAAGATGCTGCCACTGCTTTGTTTAATTTGTCAATATTTCATGAAAACAAGGGTCGTATTGTGCAAGCTGGTGCTGTTAGGCACCTTGTGGAGTTGATGGACCCAGCAGCTGGAATGGTTGACAAGGCAGTGGCTGTTTTGGCAAATCTTGCAACAATTCCAGAAGGAAGATCTGCAATTGGTGCAGAAAATGGGATCCCAGTTCTGGTTGAGGTTGTTGAGTTGGGTTCTGCAAGAGGAAAGGAGAATGCAGCAGCTGCGCTTCTGCATCTTTGTTCACACAGTAACCGATTTTTAAGCATGGTGCTCCAAGAAGGAGCTGTCCCACCATTAGTAGCTTTGTCCCAATCAGGCACGCCAAGGGCCAAAGAAAAGGCGCAGGCACTCCTCAACTACTTTAGAAATCAAAGACATGGTAATGCTGGGAGGGGCTGA 2535 0.4391 MEYQSEGKATASAFNPFLSLCNTGTMEISLLKFLVNGISSYLHLPYTGNVNSEPVSKYYQKAEEILKLIKPIIEAIDNSDLASDEVLTAIIEELGQPVDELRELIESWHLLSSKVYFVMQVETLISRIWNSALKMFQKLKDFHQCLPDELSSVDLEHYVQKLKHLGHEETSSVIKEAIREQMESAGPSLDVLAKLADVLGLRSNQEVLIEAVALEKLKENAEQNEKTADAEYIDKLIALVTRMHERLVMLKQEQSSCPVPVPTDFCCPLSLELMTDPVIVASGQTYERSFIKNWIDLGLTVCPKTRQTLAHTNLIPNYTVKALIANWCESNNVKPVDHIKPMNLSQASSIHGQQPSSPEAARSQSFNSPGKNLTSSGGIHREGTSPLHPRSISEGSLSVMANGQSLDIARVSLTGSDDRSVSSDEKSGDSVGQPSMSPSRRESSNLEQSQTHVRTASNSSSLSNGNIPQGTEGDGNSASQLSMDPGYDRDSSGEVNPGPEAAVTATTTAPQREPELSQRFLETRTRTQSIWRRPSERYVPRIASSPAIETRADLSAIETQVRKLVDELKSPSLDAQRDATAELRLLAKHNMDNRIVIANSGAISLLVELLQSNDANIQENAVTSLLNLSINDNNKTAIANAGAIEPLIHVLETGSPEAKENSAATLFSLSVIEENKIRIGRSGAIRPLVDLLGNGTPRGKKDAATALFNLSIFHENKGRIVQAGAVRHLVELMDPAAGMVDKAVAVLANLATIPEGRSAIGAENGIPVLVEVVELGSARGKENAAAALLHLCSHSNRFLSMVLQEGAVPPLVALSQSGTPRAKEKAQALLNYFRNQRHGNAGRG 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00046 844 PANTHER U BOX DOMAIN-CONTAINING 54 833 - -
Bach3g00046 844 Pfam Armadillo/beta-catenin-like repeat 674 711 IPR000225 GO:0005515
Bach3g00046 844 Pfam Armadillo/beta-catenin-like repeat 631 670 IPR000225 GO:0005515
Bach3g00046 844 Pfam Armadillo/beta-catenin-like repeat 592 629 IPR000225 GO:0005515
Bach3g00046 844 FunFam RING-type E3 ubiquitin transferase 544 839 - -
Bach3g00046 844 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 601 643 IPR000225 GO:0005515
Bach3g00046 844 MobiDBLite consensus disorder prediction 426 486 - -
Bach3g00046 844 SMART arm_5 631 671 IPR000225 GO:0005515
Bach3g00046 844 SMART arm_5 753 793 IPR000225 GO:0005515
Bach3g00046 844 SMART arm_5 713 752 IPR000225 GO:0005515
Bach3g00046 844 SMART arm_5 672 712 IPR000225 GO:0005515
Bach3g00046 844 SMART arm_5 590 630 IPR000225 GO:0005515
Bach3g00046 844 MobiDBLite consensus disorder prediction 346 381 - -
Bach3g00046 844 Pfam U-box domain 261 331 IPR003613 GO:0004842|GO:0016567
Bach3g00046 844 SMART Ubox_2 264 327 IPR003613 GO:0004842|GO:0016567
Bach3g00046 844 MobiDBLite consensus disorder prediction 346 393 - -
Bach3g00046 844 SUPERFAMILY RING/U-box 249 337 - -
Bach3g00046 844 MobiDBLite consensus disorder prediction 413 526 - -
Bach3g00046 844 Coils Coil 204 234 - -
Bach3g00046 844 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 724 765 IPR000225 GO:0005515
Bach3g00046 844 ProSiteProfiles U-box domain profile. 260 334 IPR003613 GO:0004842|GO:0016567
Bach3g00046 844 CDD RING-Ubox_PUB 262 314 IPR045210 -
Bach3g00046 844 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 242 339 IPR013083 -
Bach3g00046 844 SUPERFAMILY ARM repeat 561 833 IPR016024 -
Bach3g00046 844 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 683 725 IPR000225 GO:0005515
Bach3g00046 844 Gene3D - 539 839 IPR011989 -
Bach3g00046 844 FunFam RING-type E3 ubiquitin transferase 260 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00046 Bach-Chr3 694433 702928 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00046 221 844 U-box Gene Family AT2G23140 64.441 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00046 - - gmx:100811250 1182.55