Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00028 ATGGACCCTGAGGTAGCCGGTTGGATACTTGAATTCCTCCTTCGCAAGCCAGCTCCTGATCGCATAATCAAGAGGATCCTTGCATCATTGCCTATTCCTGACTGTGGTTCTCGCGTGAAAAAAACGTTGCTTCTCAGAACTATTCAGGATGAAGTTTCTCAAGCATCAGTTTCAGAATCTATTTTGGAATATCTAGAGATTATTGAGGAAATTGATTGCCGTGATGGCATTGCAATGACAGAATTGATGAAATCTGCATACTGTGCGGTCGCAGTGGAGTGCACTGTCAAGTATCTATCAACCGTCACGGACAACAGTTTTGAGTATTTCAACGCTGTTAAGAGGATTTGGAGAGGTCGGATATGGGAAATGGAGACATCAGTTGAGGGCAGTCAGTTGTTTACTAATGAGTTGATTCAATGGAGGAATGATATTGAGGCTGCACTTGTAGACTTGGGATTGTGTGCAAGGTTTAGGAATTTGAATACTAGAGGAGATGCACTAAGTAAACTTGGGGATTATCTGGCTGAAACATGGAAAAAGATGGGTCCTCCTTTTCTTGAATCTGTGGCTGCATTCCAGAACTTGGTGCATGATTTTGAAATTAGGGATGATGATATAATTGAACCTAATGAGGATCAAGATAAAGGTGCTCCTCATCTGTTTAATTGGGAAGAAGGCAGAACAGATTGTTCAGCAACATTTGGGGACGGTGATGCAGTCTGCATAGAGGAGCCACCAGTGACAGTCGGGATTCAGGACAATGAAAAGCTGGAAGAGAAAACTGGTGCTGCTGAGCTGAGAAATGAATATGAAGGAAGGTCAGAAGGTTCAATTGATGGAAGAGGGGACTGTGGTGTTGTGGATAGAATTGAATTGGATGATGATGCAATCTGCATAAAGGAGGTACAAAAGAAAGCTGTAACTTCAGCTGATGGAAGTCAGGAATTGGGTGGGGGTGACTTGCCTATGCTAAAAGATAGAGTTTGTGTGGAGGAGGCTCTAGTGACAGATGGGAATCAGGCCAATGAACAATTGGAAGGGAAAGCTGATACTCTTGCTGATGAAAGTCAGGAATTGAGTAGTAGTGACTTGCCTGCACAGGGAGAGAGAGTTTCCGGGGAGGAGGTGCCAGTGACAGATGGGAATCAGTCCAGTGAAAAATTGCAAAATAAAGCTGAGACTTTGGTTGATGGAAGTCAGGAATTGGGTGGGAAATTTTTTTCTTCAAAAGGAGAGACAGAAATGCAAAAGGGGAGTCGGCTGCTTAAAACCAAGCATGCTGCAGCATCCTACAGACGCCTTAAGAGGGTTAAAATAAATGATGACGAGGAAGTGGGCCCTGAAACATTGCATGGCGGTTATGACCCTTTGCCTTGTTCTGAAGTTAATAAAGTTCGGGAATCTCTTAAATCTAGTTCTTTGGAGTTAAAAGCATTGGTCAAGGATCCTCTTCCAGAAGCATTACAGATGTCTGAAATTGTAAGATCCGAATTGGCAATGAAAGACATGCATCATGAGCCACCTATTGTAAACCAGAGCAAAAATGTAGGTTTACTGGATCCACATGCTTGCGAGAGAGTCACAAGCTTTCAACCTAATGATGCTAATATTAGGGGAAAGTCTTCTGTTTATGAGAGTAATGTTTGTGGGCCCAGCTTAATGGAACGGAATAGTACAGCCCAAACTTATGAGTGGAGAGATTCGATAGAGGACTTGCCAGAAGAAACATCAGAGTATGCGAGTAAATTTCACTTGCCTACCCCAAAGAGAACTGATATTTCTCCTTTGGAGAAGTATGAACCACAAAAGTTCATAAGTAGGAGAAGAGCAAGAAAATGGAGTTTGCTGGAGGAGGACACACTTAGGGCTGGTGTCCAGAGGTTTGGTAAAGGGCACTGGAAGGAAATCCTAATGTCTTATCCTGACATATTTGAAGAGAGAACTGACGTTGACCTGAAGGACAAGTGGAGAAACATGACACGATATGGCTCAAATTGGTCTTAG 2007 0.43 MDPEVAGWILEFLLRKPAPDRIIKRILASLPIPDCGSRVKKTLLLRTIQDEVSQASVSESILEYLEIIEEIDCRDGIAMTELMKSAYCAVAVECTVKYLSTVTDNSFEYFNAVKRIWRGRIWEMETSVEGSQLFTNELIQWRNDIEAALVDLGLCARFRNLNTRGDALSKLGDYLAETWKKMGPPFLESVAAFQNLVHDFEIRDDDIIEPNEDQDKGAPHLFNWEEGRTDCSATFGDGDAVCIEEPPVTVGIQDNEKLEEKTGAAELRNEYEGRSEGSIDGRGDCGVVDRIELDDDAICIKEVQKKAVTSADGSQELGGGDLPMLKDRVCVEEALVTDGNQANEQLEGKADTLADESQELSSSDLPAQGERVSGEEVPVTDGNQSSEKLQNKAETLVDGSQELGGKFFSSKGETEMQKGSRLLKTKHAAASYRRLKRVKINDDEEVGPETLHGGYDPLPCSEVNKVRESLKSSSLELKALVKDPLPEALQMSEIVRSELAMKDMHHEPPIVNQSKNVGLLDPHACERVTSFQPNDANIRGKSSVYESNVCGPSLMERNSTAQTYEWRDSIEDLPEETSEYASKFHLPTPKRTDISPLEKYEPQKFISRRRARKWSLLEEDTLRAGVQRFGKGHWKEILMSYPDIFEERTDVDLKDKWRNMTRYGSNWS 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00028 668 ProSiteProfiles Myb-like domain profile. 606 661 IPR001005 -
Bach3g00028 668 SUPERFAMILY Homeodomain-like 612 666 IPR009057 -
Bach3g00028 668 Coils Coil 343 363 - -
Bach3g00028 668 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 606 665 IPR017930 -
Bach3g00028 668 Pfam Myb-like DNA-binding domain 613 660 IPR001005 -
Bach3g00028 668 CDD SANT_TRF 612 662 - -
Bach3g00028 668 PANTHER MYB TRANSCRIPTION FACTOR 1 663 - -
Bach3g00028 668 MobiDBLite consensus disorder prediction 352 387 - -
Bach3g00028 668 Gene3D - 614 667 - -
Bach3g00028 668 SMART sant 610 663 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00028 Bach-Chr3 440010 446391 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00028 567 660 Single Myb Histone (SMH) Gene Family AT1G15720 42.553 2.79e-13 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bach3g00028 Myb_DNA-binding 4.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00028 - - lang:109329694 378.637