Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00019 ATGGCCATGTTATTGAGAAAAGTATGGGAAACGGTGTCCAACCGTTCTTGTGCGAGTTCGAGCTCATCTGAACGTGTACGTCCAATGGATTCATCTCTGGGTGCATTCGAGCAAATTCCTTCAGACATATTGATGCAAATTCTGAAACTTTTGGGTCCAAGAGAAGTCGCCAAATTGAGCGTTCTATGCAAAGCCTGGAGATCTCTGGTGTCAGATAATCGCCTCTGGATTTCCTTCTTTCAGACCCACCACCCCCACCACCTCTCATGGGATTCCATTTTTTTCGCCGAAACCAATTTGAGCTCCGGTTACCCTCTTCAAACTTCCGTAGTTCACATGCCCCAGTTATCGTTCATGAAAATTTATGGCCAACGAGAACAGGTTCCAGGTTCTATTATCATCGATGGCGGTTCTGGCTATTGCAAGTTTGGATGGAGCAAATACGCTAGCCCATCAGGGCGATCAGCAACCTTTCTGCAGGAATTTGGTAACATCGAGTCTCCAATGTACACTAGACTTCGACATTTTTTCGCAACTATCTATAGCAGGATGCATGTGAAAGCAAGTACTCAACCAGTCATTGTTTCTTTACCAATATGCCATTATGATGATACTGAGTCTGCCAAAGCATCAAGACGGCAGCTTAAAGAAGCAATCCATGCTGCCCTGTTTGACATGAATGTTCCTGCTGTTTGTGCCATCAACCAGGCAACTTTAGCTCTGTATGCTGCAAAACGAACGTCAGGAATAGTTGTTAATATTGGTTTTCAGGTCACATCTGTAGTTCCAATTTTAAATGGTAAAGTGATGCGCAAGGTGGGCGTGGAAGTTGTGGGACTGGGAGCACTAAAACTAACTGGATTCCTTAGAGAACAGATGCAAGAGAACAAGATAAATTTTGAATCTTTATACACTGTTCGCACACTGAAAGAGAAGCTATGCTATGTTGCTGAGGATTATGCAGCTGAACTATCAAAAGATACAGAAGCATCATTTGAAGCTGCAGGAGAAGGATGGTTTACGCTCTCAAAAGAGAGGTTTCAAACCGGAGAGATGTTATTTCAGCCTCGTCTTGCTGGGATACAAGCAATGAGTTTGCACCAGGCTGTAGCTCTTTGTATGGACCATTGCAATTCTGCAGAGTTGGCAGGTGACAGTGATTGGTTCAAGACTGTAGTTTTATGTGGGGGCACTGCATGTTTACCAGGTCTTGCAGAGAGATTAGAAAAGGAACTCCACAAGTTACTTCCTCCATGTGTGTCCAATGGAATCAAAGTCATACCACCTCCATATGGTGCGGATACTGCATGGTTTGGAGGAAAGCTAATCGGCAATCTGAGCAGCTTTCCTGGTCGCTGGTGTATGACAAAGAAACAGTTTCATCAGAAGTTTAGGCTCAAACTCATATGGTGA 1413 0.4402 MAMLLRKVWETVSNRSCASSSSSERVRPMDSSLGAFEQIPSDILMQILKLLGPREVAKLSVLCKAWRSLVSDNRLWISFFQTHHPHHLSWDSIFFAETNLSSGYPLQTSVVHMPQLSFMKIYGQREQVPGSIIIDGGSGYCKFGWSKYASPSGRSATFLQEFGNIESPMYTRLRHFFATIYSRMHVKASTQPVIVSLPICHYDDTESAKASRRQLKEAIHAALFDMNVPAVCAINQATLALYAAKRTSGIVVNIGFQVTSVVPILNGKVMRKVGVEVVGLGALKLTGFLREQMQENKINFESLYTVRTLKEKLCYVAEDYAAELSKDTEASFEAAGEGWFTLSKERFQTGEMLFQPRLAGIQAMSLHQAVALCMDHCNSAELAGDSDWFKTVVLCGGTACLPGLAERLEKELHKLLPPCVSNGIKVIPPPYGADTAWFGGKLIGNLSSFPGRWCMTKKQFHQKFRLKLIW 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00019 470 Gene3D - 132 462 - -
Bach3g00019 470 ProSiteProfiles F-box domain profile. 33 79 IPR001810 GO:0005515
Bach3g00019 470 SMART fbox_2 39 79 IPR001810 GO:0005515
Bach3g00019 470 Pfam Actin 205 461 IPR004000 -
Bach3g00019 470 Gene3D - 237 435 - -
Bach3g00019 470 PANTHER ACTIN 173 461 IPR004000 -
Bach3g00019 470 SUPERFAMILY Actin-like ATPase domain 131 252 IPR043129 -
Bach3g00019 470 CDD F-box_AtARP8-like 35 79 - -
Bach3g00019 470 Gene3D - 23 104 - -
Bach3g00019 470 Pfam F-box domain 37 77 IPR001810 GO:0005515
Bach3g00019 470 Gene3D Actin; Chain A, domain 4 280 363 - -
Bach3g00019 470 SUPERFAMILY F-box domain 31 92 IPR036047 GO:0005515
Bach3g00019 470 CDD NBD_sugar-kinase_HSP70_actin 132 277 - -
Bach3g00019 470 SUPERFAMILY Actin-like ATPase domain 246 461 IPR043129 -
Bach3g00019 470 SMART actin_3 129 460 IPR004000 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00019 179 462 Cytoskeleton Gene Families AT3G12110 31.058 5.36e-37 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00019 K16616 - qsa:O6P43_013433 751.125