Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00016 ATGGAAGAGCAGCAGGAGGTTGAGTACGAGTCTGGGTCAGCCGCAAGCAGCAGCCACAAGGACAAAGTTGACGACTTGATCATGATCAACCAACAAGAAAAAGAAGAAGAAGGTACTTCTTCTGCTTCCGGTTCCGATGAGGTTGAGGTTGAGGGATCAGGAAGAGGACGGCGACCATGGTTGAAGCTTGAAATTGGAGCTGCTGCTACGGATAATCATCATATTCGGGTGTGCCGCATCTGCAAGAAAGGATTTAGTACTGGTAAAGCTCTGGGAGGTCACATGAGAATGCACGCCATGACCAATTGCAAGAATCCCAAAGAAGAAATTGGAAATAATAAAAACGATTATTTGACGTCAGAGTCATTGGTTGATGATGGTAAGCAAAATTGCAGGGTGTGTGGAAGGGATTTCCCATCCATGAAGTCCCTGTTTGGGCATATGAGGTGTCACCCTGAAAGAGAGTGGAGAGGCATTCAGCCCCCAATTCCAGTGCCAGTGCCATCCTCGTCGCCGTCGTCGGAATATTCTACCCTATCGGATGATGATCATCCCATAGTTGATTCTTCTGCCGCTGTCACTATAACTAGACCGCAGTCTGACTCTGACTCAGGCTCAGGCTCAGGCTCAGATTCTGTTGTTGATCTCTCGAGTCGTCTATCAATGGGGTGGTCTGCAACTGCCAAGAGGGGGCGTAAACGCAGCTCAGCTGGTTCAGGTTTAGAACCCGGTATCGAGCGCCGTACTGAGGAAGCTATCTATCATCTCATGATGCTCGCTTATGCCAATCCAAAACCCAACCACCTCACTCTCACCCATCAATCTCCCTCTTACTCTGAGACTGCTAAGAACATTACTTGGGAGGAAGAGGAGCAGGAGCTGGAGCCGGAACAGGGAACACCTGAAACTGAGATTACACCCTCACCCTCCCCTGAATCAGTAACAGCTAGGGAGCCTCTTAATTGTGGCTATGAGTCTAGTAGGGGGATGATGGTCATGGTTAACAACAACAAGAGAAGAAGGGTGAAAAAGTTGAAATTGACTGACTTGGAAGCTGGTGGGAGTGACAATAAAGATCAGATTCAGAATCAGATCAATAAGCACATATGCAGTTTATGCAACAAATCATTCCCAACTCACCAAGCTTTGGGTGGACACCGATCCAGCCATAACAAATCCAAGGTCATTCAGAATGTTAAAGATACTATACAAAATGTCCAATTGGAAGTCAACAGTGGACACCATTGTAATATTTGCAACAAGACATTCTCAACCGGTCAAGCTCTTGGGGGACACAAGAGATCTCACTGGACCGCCAATGCTGAAGCTACTGAACCTTATGCTACAACAGCTCAAGCTCCAGCTGAAACTACTCAACCTTATGCTAAAACAGCTCAAGCTCCAGTTGAAACTACTCAACCTTATGCTAAAACAGCTCAAGCTCCAGCTGAAACTACTCAAACTTATGCTAAATCAGCTCAAGCTTCATCTCCAGTTGAAACAACCTCACATACTGAAACCAGTCGAGCTCATCGTCCCAAGCTTTTGGATTTTGATCTGAATGAACTTCCACCTATGGATGAAGAAGATCAAGAGGTCAATGCCCCATCTGCTTCTGCTTCTCACAACGCAGTAACTAATTGA 1644 0.4635 MEEQQEVEYESGSAASSSHKDKVDDLIMINQQEKEEEGTSSASGSDEVEVEGSGRGRRPWLKLEIGAAATDNHHIRVCRICKKGFSTGKALGGHMRMHAMTNCKNPKEEIGNNKNDYLTSESLVDDGKQNCRVCGRDFPSMKSLFGHMRCHPEREWRGIQPPIPVPVPSSSPSSEYSTLSDDDHPIVDSSAAVTITRPQSDSDSGSGSGSDSVVDLSSRLSMGWSATAKRGRKRSSAGSGLEPGIERRTEEAIYHLMMLAYANPKPNHLTLTHQSPSYSETAKNITWEEEEQELEPEQGTPETEITPSPSPESVTAREPLNCGYESSRGMMVMVNNNKRRRVKKLKLTDLEAGGSDNKDQIQNQINKHICSLCNKSFPTHQALGGHRSSHNKSKVIQNVKDTIQNVQLEVNSGHHCNICNKTFSTGQALGGHKRSHWTANAEATEPYATTAQAPAETTQPYAKTAQAPVETTQPYAKTAQAPAETTQTYAKSAQASSPVETTSHTETSRAHRPKLLDFDLNELPPMDEEDQEVNAPSASASHNAVTN 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00016 547 MobiDBLite consensus disorder prediction 451 504 - -
Bach3g00016 547 MobiDBLite consensus disorder prediction 33 47 - -
Bach3g00016 547 MobiDBLite consensus disorder prediction 288 318 - -
Bach3g00016 547 SMART c2h2final6 129 151 IPR013087 -
Bach3g00016 547 SMART c2h2final6 414 436 IPR013087 -
Bach3g00016 547 SMART c2h2final6 76 98 IPR013087 -
Bach3g00016 547 SMART c2h2final6 368 390 IPR013087 -
Bach3g00016 547 MobiDBLite consensus disorder prediction 15 32 - -
Bach3g00016 547 MobiDBLite consensus disorder prediction 225 244 - -
Bach3g00016 547 ProSitePatterns Zinc finger C2H2 type domain signature. 78 98 IPR013087 -
Bach3g00016 547 ProSiteProfiles Zinc finger C2H2 type domain profile. 76 99 IPR013087 -
Bach3g00016 547 SUPERFAMILY beta-beta-alpha zinc fingers 413 439 IPR036236 -
Bach3g00016 547 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 35 106 IPR044653 GO:0003700
Bach3g00016 547 ProSitePatterns Zinc finger C2H2 type domain signature. 131 151 IPR013087 -
Bach3g00016 547 MobiDBLite consensus disorder prediction 195 214 - -
Bach3g00016 547 ProSiteProfiles Zinc finger C2H2 type domain profile. 129 156 IPR013087 -
Bach3g00016 547 Gene3D Classic Zinc Finger 77 151 - -
Bach3g00016 547 Gene3D Classic Zinc Finger 365 440 - -
Bach3g00016 547 MobiDBLite consensus disorder prediction 157 185 - -
Bach3g00016 547 MobiDBLite consensus disorder prediction 170 184 - -
Bach3g00016 547 ProSiteProfiles Zinc finger C2H2 type domain profile. 414 436 IPR013087 -
Bach3g00016 547 MobiDBLite consensus disorder prediction 299 315 - -
Bach3g00016 547 MobiDBLite consensus disorder prediction 451 547 - -
Bach3g00016 547 SUPERFAMILY beta-beta-alpha zinc fingers 77 151 IPR036236 -
Bach3g00016 547 ProSitePatterns Zinc finger C2H2 type domain signature. 370 390 IPR013087 -
Bach3g00016 547 Pfam C2H2-type zinc finger 414 438 - -
Bach3g00016 547 Pfam C2H2-type zinc finger 130 153 - -
Bach3g00016 547 Pfam C2H2-type zinc finger 77 98 - -
Bach3g00016 547 Pfam C2H2-type zinc finger 368 392 - -
Bach3g00016 547 ProSitePatterns Zinc finger C2H2 type domain signature. 416 436 IPR013087 -
Bach3g00016 547 SUPERFAMILY beta-beta-alpha zinc fingers 367 395 IPR036236 -
Bach3g00016 547 MobiDBLite consensus disorder prediction 1 55 - -
Bach3g00016 547 ProSiteProfiles Zinc finger C2H2 type domain profile. 368 395 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00016 Bach-Chr3 342652 344295 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00016 77 164 C2H2 Transcription Factor Family AT2G26940 40.741 1.90e-16 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach3g00016 zf-C2H2_6 1.1e-10 CL0361