Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bach3g00016 | ATGGAAGAGCAGCAGGAGGTTGAGTACGAGTCTGGGTCAGCCGCAAGCAGCAGCCACAAGGACAAAGTTGACGACTTGATCATGATCAACCAACAAGAAAAAGAAGAAGAAGGTACTTCTTCTGCTTCCGGTTCCGATGAGGTTGAGGTTGAGGGATCAGGAAGAGGACGGCGACCATGGTTGAAGCTTGAAATTGGAGCTGCTGCTACGGATAATCATCATATTCGGGTGTGCCGCATCTGCAAGAAAGGATTTAGTACTGGTAAAGCTCTGGGAGGTCACATGAGAATGCACGCCATGACCAATTGCAAGAATCCCAAAGAAGAAATTGGAAATAATAAAAACGATTATTTGACGTCAGAGTCATTGGTTGATGATGGTAAGCAAAATTGCAGGGTGTGTGGAAGGGATTTCCCATCCATGAAGTCCCTGTTTGGGCATATGAGGTGTCACCCTGAAAGAGAGTGGAGAGGCATTCAGCCCCCAATTCCAGTGCCAGTGCCATCCTCGTCGCCGTCGTCGGAATATTCTACCCTATCGGATGATGATCATCCCATAGTTGATTCTTCTGCCGCTGTCACTATAACTAGACCGCAGTCTGACTCTGACTCAGGCTCAGGCTCAGGCTCAGATTCTGTTGTTGATCTCTCGAGTCGTCTATCAATGGGGTGGTCTGCAACTGCCAAGAGGGGGCGTAAACGCAGCTCAGCTGGTTCAGGTTTAGAACCCGGTATCGAGCGCCGTACTGAGGAAGCTATCTATCATCTCATGATGCTCGCTTATGCCAATCCAAAACCCAACCACCTCACTCTCACCCATCAATCTCCCTCTTACTCTGAGACTGCTAAGAACATTACTTGGGAGGAAGAGGAGCAGGAGCTGGAGCCGGAACAGGGAACACCTGAAACTGAGATTACACCCTCACCCTCCCCTGAATCAGTAACAGCTAGGGAGCCTCTTAATTGTGGCTATGAGTCTAGTAGGGGGATGATGGTCATGGTTAACAACAACAAGAGAAGAAGGGTGAAAAAGTTGAAATTGACTGACTTGGAAGCTGGTGGGAGTGACAATAAAGATCAGATTCAGAATCAGATCAATAAGCACATATGCAGTTTATGCAACAAATCATTCCCAACTCACCAAGCTTTGGGTGGACACCGATCCAGCCATAACAAATCCAAGGTCATTCAGAATGTTAAAGATACTATACAAAATGTCCAATTGGAAGTCAACAGTGGACACCATTGTAATATTTGCAACAAGACATTCTCAACCGGTCAAGCTCTTGGGGGACACAAGAGATCTCACTGGACCGCCAATGCTGAAGCTACTGAACCTTATGCTACAACAGCTCAAGCTCCAGCTGAAACTACTCAACCTTATGCTAAAACAGCTCAAGCTCCAGTTGAAACTACTCAACCTTATGCTAAAACAGCTCAAGCTCCAGCTGAAACTACTCAAACTTATGCTAAATCAGCTCAAGCTTCATCTCCAGTTGAAACAACCTCACATACTGAAACCAGTCGAGCTCATCGTCCCAAGCTTTTGGATTTTGATCTGAATGAACTTCCACCTATGGATGAAGAAGATCAAGAGGTCAATGCCCCATCTGCTTCTGCTTCTCACAACGCAGTAACTAATTGA | 1644 | 0.4635 | MEEQQEVEYESGSAASSSHKDKVDDLIMINQQEKEEEGTSSASGSDEVEVEGSGRGRRPWLKLEIGAAATDNHHIRVCRICKKGFSTGKALGGHMRMHAMTNCKNPKEEIGNNKNDYLTSESLVDDGKQNCRVCGRDFPSMKSLFGHMRCHPEREWRGIQPPIPVPVPSSSPSSEYSTLSDDDHPIVDSSAAVTITRPQSDSDSGSGSGSDSVVDLSSRLSMGWSATAKRGRKRSSAGSGLEPGIERRTEEAIYHLMMLAYANPKPNHLTLTHQSPSYSETAKNITWEEEEQELEPEQGTPETEITPSPSPESVTAREPLNCGYESSRGMMVMVNNNKRRRVKKLKLTDLEAGGSDNKDQIQNQINKHICSLCNKSFPTHQALGGHRSSHNKSKVIQNVKDTIQNVQLEVNSGHHCNICNKTFSTGQALGGHKRSHWTANAEATEPYATTAQAPAETTQPYAKTAQAPVETTQPYAKTAQAPAETTQTYAKSAQASSPVETTSHTETSRAHRPKLLDFDLNELPPMDEEDQEVNAPSASASHNAVTN | 547 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bach3g00016 | 547 | MobiDBLite | consensus disorder prediction | 451 | 504 | - | - | |
Bach3g00016 | 547 | MobiDBLite | consensus disorder prediction | 33 | 47 | - | - | |
Bach3g00016 | 547 | MobiDBLite | consensus disorder prediction | 288 | 318 | - | - | |
Bach3g00016 | 547 | SMART | c2h2final6 | 129 | 151 | IPR013087 | - | |
Bach3g00016 | 547 | SMART | c2h2final6 | 414 | 436 | IPR013087 | - | |
Bach3g00016 | 547 | SMART | c2h2final6 | 76 | 98 | IPR013087 | - | |
Bach3g00016 | 547 | SMART | c2h2final6 | 368 | 390 | IPR013087 | - | |
Bach3g00016 | 547 | MobiDBLite | consensus disorder prediction | 15 | 32 | - | - | |
Bach3g00016 | 547 | MobiDBLite | consensus disorder prediction | 225 | 244 | - | - | |
Bach3g00016 | 547 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 78 | 98 | IPR013087 | - | |
Bach3g00016 | 547 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 76 | 99 | IPR013087 | - | |
Bach3g00016 | 547 | SUPERFAMILY | beta-beta-alpha zinc fingers | 413 | 439 | IPR036236 | - | |
Bach3g00016 | 547 | PANTHER | C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED | 35 | 106 | IPR044653 | GO:0003700 | |
Bach3g00016 | 547 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 131 | 151 | IPR013087 | - | |
Bach3g00016 | 547 | MobiDBLite | consensus disorder prediction | 195 | 214 | - | - | |
Bach3g00016 | 547 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 129 | 156 | IPR013087 | - | |
Bach3g00016 | 547 | Gene3D | Classic Zinc Finger | 77 | 151 | - | - | |
Bach3g00016 | 547 | Gene3D | Classic Zinc Finger | 365 | 440 | - | - | |
Bach3g00016 | 547 | MobiDBLite | consensus disorder prediction | 157 | 185 | - | - | |
Bach3g00016 | 547 | MobiDBLite | consensus disorder prediction | 170 | 184 | - | - | |
Bach3g00016 | 547 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 414 | 436 | IPR013087 | - | |
Bach3g00016 | 547 | MobiDBLite | consensus disorder prediction | 299 | 315 | - | - | |
Bach3g00016 | 547 | MobiDBLite | consensus disorder prediction | 451 | 547 | - | - | |
Bach3g00016 | 547 | SUPERFAMILY | beta-beta-alpha zinc fingers | 77 | 151 | IPR036236 | - | |
Bach3g00016 | 547 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 370 | 390 | IPR013087 | - | |
Bach3g00016 | 547 | Pfam | C2H2-type zinc finger | 414 | 438 | - | - | |
Bach3g00016 | 547 | Pfam | C2H2-type zinc finger | 130 | 153 | - | - | |
Bach3g00016 | 547 | Pfam | C2H2-type zinc finger | 77 | 98 | - | - | |
Bach3g00016 | 547 | Pfam | C2H2-type zinc finger | 368 | 392 | - | - | |
Bach3g00016 | 547 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 416 | 436 | IPR013087 | - | |
Bach3g00016 | 547 | SUPERFAMILY | beta-beta-alpha zinc fingers | 367 | 395 | IPR036236 | - | |
Bach3g00016 | 547 | MobiDBLite | consensus disorder prediction | 1 | 55 | - | - | |
Bach3g00016 | 547 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 368 | 395 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bach3g00016 | Bach-Chr3 | 342652 | 344295 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bach3g00016 | 77 | 164 | C2H2 Transcription Factor Family | AT2G26940 | 40.741 | 1.90e-16 | 78.2 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Bach3g00016 | zf-C2H2_6 | 1.1e-10 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bach3g00016 | - | - | qlo:115955202 | 211.46 |