Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00008 ATGGAGGTGATTTTGGCATCTTCTTCTGTTGACGAGGGTATTGGGTGTTGGGAGCTTGAGACGGGGGCTGAGTGCCTCCGCTACAAGTCCTGTGCCTCTCCACCTCATGGCCTCGTTTGCGTGGGCCACCGTTTCCTTGCGTCTTCTCAGCTCCAAGACTCTTCACTATCCTCTGGCTTCCTTCCCTACTGGTCCTACTCCAAGCCTCAAGTACAAGTTAAGAGCTTTCCAGCTGAACCAATTAAGCCGCCTAATCACCCTGGCACCTATATAGCTGGTGGAGGATTATCAGGTCAAATATACTTTTGGGAGGTTGAAAGTGGCAGATTACTTAAGAAGTGGCATGCTCATTATAGGTCTGTTACATGCCTGGTCTTTAATGAAGATGACTCACTGTTGATATCTGGTTCAGAAGATGGGTCTGTACGAGTTTGGAACCTGTTCATGATATTTGATGATTTAAGTGCGCATGAAGCAAATCATCTTTATGAGCATAGTTTTTCAGAGCATACAATGCAAGTGACTGATGTTGCAATTGGTTATGGAGGGTCTAATGCAATTATAGTGTCAGCTTCAGAGGATTGGACTTGCAAGGTGTGGAGCTTATCTAGAGGAACACTACTGAGAAATATAGTATTCCCTTCAATAATTAATGTCATTGTATTGGATCCGGCTGAACAATTCTTTTATGCTGGCAGTAGAGATGGAAAAATATTCATTGCTGCTCTTAATGCTGAAAGTGTCTCTAAAAAGGATGGAATGATTTGTGTGTGGAATGCAAAAACTCATAACATTGTCCGCATGTTTAAACATGGAAAAGGTCCTGTAAACAATATTCTTGTCATTAGACAACAACTAAATTTGAATGAAAATTCATATGTCACTATCAGCCTCGAGGGTGGCAGATCTACAGATATTTCATACCGCAGTACTGATCTGATTTTTAATCAGATTAAGGAACTTCAGAGTTCTACTGCTGCTAATGAAATGGAGCTGGAGAAACTAAAACATGATTACAATAGGTCGATGCAAATGGTTAACCAATGGAAGAAAATGTATGAGAACTTGCATCAATTCTGTGTAGATGAGCTTTTGGATGGTTGA 1104 0.4121 MEVILASSSVDEGIGCWELETGAECLRYKSCASPPHGLVCVGHRFLASSQLQDSSLSSGFLPYWSYSKPQVQVKSFPAEPIKPPNHPGTYIAGGGLSGQIYFWEVESGRLLKKWHAHYRSVTCLVFNEDDSLLISGSEDGSVRVWNLFMIFDDLSAHEANHLYEHSFSEHTMQVTDVAIGYGGSNAIIVSASEDWTCKVWSLSRGTLLRNIVFPSIINVIVLDPAEQFFYAGSRDGKIFIAALNAESVSKKDGMICVWNAKTHNIVRMFKHGKGPVNNILVIRQQLNLNENSYVTISLEGGRSTDISYRSTDLIFNQIKELQSSTAANEMELEKLKHDYNRSMQMVNQWKKMYENLHQFCVDELLDG 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00008 367 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 5 276 IPR011047 -
Bach3g00008 367 ProSitePatterns Trp-Asp (WD) repeats signature. 133 147 IPR019775 -
Bach3g00008 367 Coils Coil 318 338 - -
Bach3g00008 367 ProSiteProfiles Trp-Asp (WD) repeats profile. 114 147 IPR001680 GO:0005515
Bach3g00008 367 ProSiteProfiles Trp-Asp (WD) repeats profile. 167 210 IPR001680 GO:0005515
Bach3g00008 367 SMART WD40_4 107 146 IPR001680 GO:0005515
Bach3g00008 367 SMART WD40_4 160 201 IPR001680 GO:0005515
Bach3g00008 367 SMART WD40_4 204 242 IPR001680 GO:0005515
Bach3g00008 367 Pfam WD domain, G-beta repeat 165 201 IPR001680 GO:0005515
Bach3g00008 367 Pfam WD domain, G-beta repeat 109 146 IPR001680 GO:0005515
Bach3g00008 367 PANTHER WD-REPEAT PROTEIN 18 249 365 IPR045227 -
Bach3g00008 367 FunFam Protein ROOT INITIATION DEFECTIVE 3 1 240 - -
Bach3g00008 367 Gene3D - 2 301 IPR015943 GO:0005515
Bach3g00008 367 PRINTS G protein beta WD-40 repeat signature 133 147 IPR020472 -
Bach3g00008 367 PRINTS G protein beta WD-40 repeat signature 5 19 IPR020472 -
Bach3g00008 367 PRINTS G protein beta WD-40 repeat signature 188 202 IPR020472 -
Bach3g00008 367 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 114 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00008 Bach-Chr3 202607 206790 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00008 78 302 U-box Gene Family AT1G04510 24.051 1.78e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00008 K14829 - qsa:O6P43_016055 513.072