Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g02504 ATGGAGGAAGCAATGGCAGCAAGGTATTGGTGTCATATGTGCTCTCAAATGGTAAATCCAATCGTGGAAGTGGAGATCAAATGCCCATTTTGCCAAAGCGGATTTGTTGAAGAAATGAGTAGCACCACCACCACTAGCGGCAATCACAATACGGCAGAAACTGATTTTGGATCCGATAGGGCCCTCTCCCTATGGGCCCCAATCTTGCTAGGGATGATGGGTAATCCACGTCGTCAACGAAGACTCAGACGATTAGACCTTGGTGATGATGATGATGATGATAATGATACCCACAATGATGATGATGGCGAAGCCCGCCATACTGGAGAAATAGAATATGGTCGAGAGCTTGAGTCCATTCTTCGGAGGAGGAGGAGAAGAAGCTCAGCTACCATTCTACAATTGCTGCAAGGCATAAGAGCTGGATTGGCTTCTGAATCATATGAGAATTCCGAAGGTGATGACGGTGACAGGGAAAGAGAAAGAGACAGAGAAAGAGAGCGTGTAATATTGATTAATCCTTTTAATCAGACAATCATTGTTCAAGGTTCCTATGATTCAAACCGGGATCAGAACGATGACCATAACCCCATTGGGTCACGGGGTGATTATTTCATAGGACCTGGATTGGATTTATTGCTGCAACATTTGGCAGAGAACGATCCGAATAGATATGGAACTCCACCTGCACAGAAGGAGGCAATCGAAGCACTACCTACTGTGACAATCAATGAAAATCTGCAGTGTTCTGTGTGTCTGGATGATTTCGAATCTGGTTCTGAAGCCAAGGAGATGCCTTGTAAACATAGATTTCATAGTGGGTGCATCCTACCCTGGCTGGAGCTTCATAGTTCCTGTCCAGTTTGTAGGTTTCAATTGCCTATGGATGAATGCAAACGAGGCTCTGAAGCATCTAGGAACAACAGCAGCGATAACCAGAGGGAGAATGAAGGTGATGTTCTTGTTCAACATGACAGAGGGAGTGGTGAAGAGGGAGATGTGGAAGGGAGAAATGCAAGTGGGGGTCGAAGGTTCTCATTTCCATGGCCTTTCAATGGATTATTTTCTTCCTCAAACTCTTCATCATCATCTAGTCCTAATGCAAACGGAAATGATACTCAAACCGATGACAACTGA 1137 0.4485 MEEAMAARYWCHMCSQMVNPIVEVEIKCPFCQSGFVEEMSSTTTTSGNHNTAETDFGSDRALSLWAPILLGMMGNPRRQRRLRRLDLGDDDDDDNDTHNDDDGEARHTGEIEYGRELESILRRRRRRSSATILQLLQGIRAGLASESYENSEGDDGDRERERDRERERVILINPFNQTIIVQGSYDSNRDQNDDHNPIGSRGDYFIGPGLDLLLQHLAENDPNRYGTPPAQKEAIEALPTVTINENLQCSVCLDDFESGSEAKEMPCKHRFHSGCILPWLELHSSCPVCRFQLPMDECKRGSEASRNNSSDNQRENEGDVLVQHDRGSGEEGDVEGRNASGGRRFSFPWPFNGLFSSSNSSSSSSPNANGNDTQTDDN 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g02504 378 FunFam E3 ubiquitin-protein ligase RING1-like 216 296 - -
Bach2g02504 378 MobiDBLite consensus disorder prediction 86 110 - -
Bach2g02504 378 MobiDBLite consensus disorder prediction 300 378 - -
Bach2g02504 378 SMART ring_2 249 289 IPR001841 -
Bach2g02504 378 SUPERFAMILY RING/U-box 238 296 - -
Bach2g02504 378 CDD RING-H2_RNF126-like 248 290 - -
Bach2g02504 378 MobiDBLite consensus disorder prediction 300 338 - -
Bach2g02504 378 Pfam zinc-ribbon 8 39 IPR039525 GO:0061630
Bach2g02504 378 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 154 294 - -
Bach2g02504 378 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 216 296 IPR013083 -
Bach2g02504 378 ProSiteProfiles Zinc finger RING-type profile. 249 290 IPR001841 -
Bach2g02504 378 MobiDBLite consensus disorder prediction 351 378 - -
Bach2g02504 378 Pfam Ring finger domain 248 290 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g02504 Bach-Chr2 31024289 31025425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g02504 110 296 C3H Transcription Factor Family AT1G26800 38.421 6.13e-30 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g02504 - K11982 gmx:100784876 478.404