Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g02442 ATGGAGTGGAATGCATCTCCCTCGCAGTGGGAGTGGGAACAGCTATACTTATTAAATGCAAAAGCGACTGAAACTCCCAGGTTACAACAAGCAAACTGGAGCACTGAAGCAGATCGAGAAATCAATGTCAGGTTCTTCTATTCTTCTGGAGGTAATGGTTGTTCTGGGTCAGAGATAATGCATGCTTCTTCATCAAGGAGTTCAAAATCTACTTCCATCAATTCATCATCAAATGGTGAAAGCAAAACATCAATATTCAACTTAGAAGGTTCCCAAGATGATTCTAGTAGTAAGAAAGAAACGTCAAAAGATGAGCCTATTGGAACTTCTCCTACTCCTGAGCCTTCTTCTGTCTCTGGTGAGCCTTTGCTCAGTCTAAAGCTTGGTAAACGGCTGTACTTCGAAGATGTTTGCCCTGGGAGTGATACCAAGAATCTGTCATTCTCTGGGGTTCCAATGCCATCTTTGAGTACCGGAAAGAAAGGTAAGTCCAACTATCAGAGCGTACAACCTCCACGCTGCCAGGTTGAGGGCTGTAATCTTGACCTCACATCAGCTAAAGATTATCATCGAAAACATAGAGTTTGTGAAAGTCATTCCAAATCCCCTAAGGTACTTGTAAATGGCCTGGAACGTCGTTTTTGCCAGCAATGTAGCAGGTTCCATAGTCTGTCAGAGTTTGATGAGAAAAAGAGAAGCTGCCGCCGACGTCTTTCTGATCACAATGCAAGGCGTCGCAAGCCTCATCCTGAAGCAGTCAAACTAAATCCATCGGCTTTTTCTTTGTCAGAATATGATGGGAGGCAACAGATGAGGCCATTTACTCATTCAAGGCCTGCTACAAATTTAGCCTGGCAAGATATATACACCAGCAAGCTACTCCAGACAAAAGATTTTCTCGTCAAGCCTGCAAGAGCAGGAGCTAACAATGGGCGAGTGCATCAGCCCTTCAATGAGATGCCTAGTACCTTCACTGTGCCTTCTAATGATGCCAGTGGCCTTTTTAGATCCAAAGGTATAGCAGCCAAGACCATCAGTCCAGACCAACTTTTTGCAGGTGTAGATGACTGCATTGCCTCATCTGATCTGAATGCTGCACAGGATTTTCATCGTGCTCTCTCTCTTCTGTCATCCAATTCTTGGGGTTCATATGAGACAAAACCAGTTTCTCTAGAACACTCCAATCACACAACTCACACCAGTATGGCTCACCCAACAACAAACTCAATGGTGCAGCGCTTGCACCTTGTTTCCTCAGAATATTGGGAGACTGGTCAACAATCTATTGATTCCCGAATGTGTATTTCATACTCTGATTGTGAAAATGGCAACCGGTTTCAAGACTGCCAACTGTTCAAAGCACCCTATGAGTCTGGTTTTCCTTGCAATCAGTTGGATTAA 1401 0.4404 MEWNASPSQWEWEQLYLLNAKATETPRLQQANWSTEADREINVRFFYSSGGNGCSGSEIMHASSSRSSKSTSINSSSNGESKTSIFNLEGSQDDSSSKKETSKDEPIGTSPTPEPSSVSGEPLLSLKLGKRLYFEDVCPGSDTKNLSFSGVPMPSLSTGKKGKSNYQSVQPPRCQVEGCNLDLTSAKDYHRKHRVCESHSKSPKVLVNGLERRFCQQCSRFHSLSEFDEKKRSCRRRLSDHNARRRKPHPEAVKLNPSAFSLSEYDGRQQMRPFTHSRPATNLAWQDIYTSKLLQTKDFLVKPARAGANNGRVHQPFNEMPSTFTVPSNDASGLFRSKGIAAKTISPDQLFAGVDDCIASSDLNAAQDFHRALSLLSSNSWGSYETKPVSLEHSNHTTHTSMAHPTTNSMVQRLHLVSSEYWETGQQSIDSRMCISYSDCENGNRFQDCQLFKAPYESGFPCNQLD 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g02442 466 Pfam SBP domain 174 247 IPR004333 GO:0003677
Bach2g02442 466 Gene3D - 165 235 IPR036893 GO:0003677|GO:0005634
Bach2g02442 466 MobiDBLite consensus disorder prediction 57 121 - -
Bach2g02442 466 FunFam Squamosa promoter-binding-like protein 14 165 235 - -
Bach2g02442 466 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 57 405 IPR044817 GO:0003677
Bach2g02442 466 MobiDBLite consensus disorder prediction 57 92 - -
Bach2g02442 466 ProSiteProfiles Zinc finger SBP-type profile. 171 248 IPR004333 GO:0003677
Bach2g02442 466 SUPERFAMILY SBT domain 172 253 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g02442 Bach-Chr2 30592680 30594841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g02442 1 430 SBP-box Gene Family AT5G43270 39.326 3.53e-67 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bach2g02442 SBP 1.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g02442 - - pcin:129309383 566.229