Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g02393 TCCTGTCTCACATCCATGCGTGCATATATACTCATACAAACAAACACTCTCTCTTTCTCTCTTTGAGCAAACAAATTATATATAAATACCATTAATTAATTACTGGCCATATGGGTAGATCTCCTTGTTGTGAGAAAGAGCACACAAACAAAGGAGCTTGGACCAAAGAGGAAGATGAACGCCTCATCAACTATATCAAGCTTCAAGGCGAAGGCTGTTGGAGATCTCTTCCTAAAGCTGCAGGTTTGCTTCGATGTGGCAAGAGTTGCAGACTCAGATGGATAAACTACCTGAGACCTGATCTTAAGAGAGGAAACTTCACCGAAGAAGAAGATGAGCTCATCATCAACCTCCACAGCTTACTTGGAAACAAATGGTCTCTAATAGCCGCAAGATTACCGGGAAGGACAGACAATGAGGTCAAGAACTACTGGAACACCCACATCAAACGGAAACTCTATAGCCGTGGAATCGACCCTCAAACTCATCGCCCAATCAACACCACAGCCGCCGCTATTCCACCGACAAATACTAGTGTCCCTGTAGATGTGGTCGCAACAAGTAGTAGAAAAACTAACAACGATAGCATTAACAGCAGCAACAACAACAACAACTTTGATTTAGTGAATAACTTGTGTTTAAATGGTTATACCAATACAAAAATTATAACGGACTCGACTGCTGGTGGTGGTGAAGATTCAAATTCCAACAGCAGCGGCGGCGTTACCAGAGATGTTGAAGCCTATCATCAACTCAACCTTGAGCTCTCCATAGGCCTTCCCTCTCAATCCCGAGTTTTTTTGAAACGACAACGACAAGAACAAGAACAACATCAGCAACATCAACCGGTTTTGTACCAGTGGTATGGGAATAATAGCCAAGGTTTATGTTTGTGCTGCAGTCTAGGGTTACAAAGTAACCAAACGGCAACATGCAGCTGCAATTGCAATCCCATGGATACTGCTACTAGTGCTGTTACTACAACTACGATCGACAATCTGTACAGATTCTACAAACCCTTGAATATTTAA 1031 0.4248 MGRSPCCEKEHTNKGAWTKEEDERLINYIKLQGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIINLHSLLGNKWSLIAARLPGRTDNEVKNYWNTHIKRKLYSRGIDPQTHRPINTTAAAIPPTNTSVPVDVVATSSRKTNNDSINSSNNNNNFDLVNNLCLNGYTNTKIITDSTAGGGEDSNSNSSGGVTRDVEAYHQLNLELSIGLPSQSRVFLKRQRQEQEQHQQHQPVLYQWYGNNSQGLCLCCSLGLQSNQTATCSCNCNPMDTATSAVTTTTIDNLYRFYKPLNI 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g02393 306 Gene3D - 68 134 - -
Bach2g02393 306 CDD SANT 69 112 IPR001005 -
Bach2g02393 306 CDD SANT 16 61 IPR001005 -
Bach2g02393 306 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bach2g02393 306 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Bach2g02393 306 FunFam MYB-related transcription factor 13 66 - -
Bach2g02393 306 Gene3D - 14 66 - -
Bach2g02393 306 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bach2g02393 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bach2g02393 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bach2g02393 306 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bach2g02393 306 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Bach2g02393 306 SMART sant 66 114 IPR001005 -
Bach2g02393 306 SMART sant 13 63 IPR001005 -
Bach2g02393 306 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 231 - -
Bach2g02393 306 FunFam Myb transcription factor 68 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g02393 Bach-Chr2 30226075 30227436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g02393 1 300 MYB Transcription Factor Family AT4G38620 50.000 3.71e-88 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach2g02393 Myb_DNA-binding 1.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g02393 K09422 - gmx:100808083 359.377