Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bach2g02351 | ATGGCAGGAGAAGAAGCAGGTAATCCACCATCAACTCCCGAATCGCCAACCTCTCCTTCAGCTGCTTTCAACACTGATCAGCTTCCTCATACCGGCCGGACCTCCGAAGATGACGATGAGGCGGCCGTTGACCCCGAAGTTATACGAGATGAGCCTGAAGAACCCGATGAGGAGGACGAAGGGGAGGATCTGTACAACGACAATTTCATGGATGATTACCGGCGGATGGAAGAACATGACCAGTACGAGTCAATTGGACTGGACGACTCCTTGGAAGATGATAGGGATGTGGATCAGATTATGCTGGATCGAAGAGCTGCTGAGGCGGAACTGGAGGCTCGTGATGGTCCCGTGTCCATTCGCAGCAAGCTTCCTCAGCTTCTCCACGACCAGGATACAGATGATGATAGCTACAGGCCTTCAAAAAGGGCTCGAGCTGATTTCAGGTCTCCAGCTAATCTACGTAGCGATGATGATGTCGACGGGTTACAAAGTTCACCTGGAAGGTCACAGCAAGGACATTCTAGAGAGGATGTTCCTATGACTGATCAGACAGAGGATGAACGATATGAAGATGAATATGATGAAGAAGGTGAGTACGAGATGTATCGTGTTCAAGGAACTCTAAGAGAGTGGGTTACTCGAGATGAAGTGCGCCGCTTTATTGCCAGAAAATTCAAGGATTTCTTACTCACATATGTGAATTCAAAGAATGAAAATGGTGACTATGAATACGTGCGGCTGATAAATGAGATGGTCTCAGCAAACAAGTGCAGTTTGGAGATTGATTACAAACAATTTATCTATGTGCATCCCAACATTGCCATTTGGCTGGCTGATGCGCCCCAGTCTGTTTTAGAAGTAATGGAAGATGTGGCCAAAAACGTCGTCTTTCACTTACATCCCAACTACAGAAATATACATCAGAAGATTTATGTTCGCATAACTAACTTACCAGTTTATGATCAGATTAGAAATATAAGCAGGCAGATTCATTTGAATACCATGATCCGAATTGGGGGAGTTGTAACCAGGCGCTCTGGGGTCTTCCCTCAGCTGCAACAGGTGAAGTATGACTGCAACAAATGTGGAACAATTTTGGGTCCATTTTTCCAGAACTCCTATTCAGAAGTGAAGGTTGGATCCTGCCCAGAGTGTCAATCAAAAGGACCATTCACTGTCAATATTGAGCAGACAATTTATAGGAATTACCAAAAGCTTTCTCTCCAAGAGAGCCCTGGAATAGTTCCCGCTGGTCGACTTCCAAGGTACAAGGAAGTGATACTATTGAATGATCTGATTGATTGTGCCCGCCCTGGAGAAGAGATTGAGGTCACAGGAATTTATTCCAACAACTTTGACTTATCTCTAAACACAAAGAACGGGTTTCCAGTATTCGCCACTGTAGTTGAGGCAAATTATGTCACGAAGAAGCAAGACCTGTTCTCTTCCTACAAACTTACACAGGAAGACAAAGAAGAGATTGAAAAGTTGGCCAAAGACCCCAGAATAGCAGAAAGGATTATCAAGTCCATTGCGCCATCAATCTATGGCCACGAGGACATTAAAACTGCAGTTGCTTTAGCTATGTTTGGAGGTCAAGAGAAAAACGTTGAAGGAAAGCATCGACTGCGAGGGGACATAAATGTTCTTCTTCTTGGTGATCCAGGAACGGCCAAATCGCAATTTCTCAAGTATGTTGAAAAGACTGGGCAGAGAGCTGTTTATACGACTGGTAAAGGGGCTTCTGCTGTGGGGCTCACAGCGGCAGTTCACAAGGATCCTGTCACAAGGGAGTGGACCCTTGAAGGCGGAGCCCTTGTTCTAGCTGACAAAGGAATTTGTCTTATTGATGAGTTCGACAAGATGAATGATCAAGATAGGGTAAGTATCCATGAAGCTATGGAGCAGCAGAGCATAAGCATATCAAAAGCGGGAATTGTCACATCTCTCCAGGCGCGCTGTTCCGTCATTGCTGCTGCAAATCCTATTGGAGGAAGATATGACTCCTCCAAGACGTTTTCTCAAAATGTTGAATTGACAGACCCGATTGTTTCTCGTTTTGACATCCTCTGTGTTGTGAAGGATGTTGTTGATCCAGTCACTGATGAAATGCTTGCAAGGTTTGTAGTTGACAGCCACTTTAAGTCACAGCCTAAGGGTGCTAACATAGAGGAGAAGTCCATAAGCGAATCCCAAGATGCCGATGCATCTACCATTCCAGCCGATCCTGAGATACTTCCTCAAGATCTGCTGAAGAAGTACATTACATATGCCAAGTTGAATGTGTTTCCGAGGTTACATGATGCTGATATGGATAAGCTAACACATGTTTATGCTGAACTGCGGAGGGAATCTTCGTATGGGCAAGGAGTCCCCATTGCCGTAAGGCACATAGAATCAATGATAAGGATGTCTGAAGCACATGCGAGAATGCATCTCAGACAGCATGTCACCCAAGAAGACGTTGACATGGCAATTCGTGTACTACTTGATTCATTCATTTCAACCCAAAAATTTGGAGTGCAGAAAGCTCTGCAAAAGAGCTTCAGAAAGTATATGACTTTCAAGAAGGATTATAATGAATTGCTACTTTACCTTCTTCGTGAGCTTGTAAAGAATGCTTTGCATTTCGAAGCAATTGTTAGTGAATCTACTTCAGGGCTTACGCATATAGATGTCAAAGTAGAAGATCTCTACAACAAAGCTCAAGAGCATGAAATCTATGATCTTAACCCCTTCTTTAGTAGCACTCACTTCTCAAGAGCCAATTTTGTATTGGATATAGAGAAAGGAGTGATCAGACATCGTCTTTCAAGATGA | 2823 | 0.4407 | MAGEEAGNPPSTPESPTSPSAAFNTDQLPHTGRTSEDDDEAAVDPEVIRDEPEEPDEEDEGEDLYNDNFMDDYRRMEEHDQYESIGLDDSLEDDRDVDQIMLDRRAAEAELEARDGPVSIRSKLPQLLHDQDTDDDSYRPSKRARADFRSPANLRSDDDVDGLQSSPGRSQQGHSREDVPMTDQTEDERYEDEYDEEGEYEMYRVQGTLREWVTRDEVRRFIARKFKDFLLTYVNSKNENGDYEYVRLINEMVSANKCSLEIDYKQFIYVHPNIAIWLADAPQSVLEVMEDVAKNVVFHLHPNYRNIHQKIYVRITNLPVYDQIRNISRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCNKCGTILGPFFQNSYSEVKVGSCPECQSKGPFTVNIEQTIYRNYQKLSLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGIYSNNFDLSLNTKNGFPVFATVVEANYVTKKQDLFSSYKLTQEDKEEIEKLAKDPRIAERIIKSIAPSIYGHEDIKTAVALAMFGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEKTGQRAVYTTGKGASAVGLTAAVHKDPVTREWTLEGGALVLADKGICLIDEFDKMNDQDRVSIHEAMEQQSISISKAGIVTSLQARCSVIAAANPIGGRYDSSKTFSQNVELTDPIVSRFDILCVVKDVVDPVTDEMLARFVVDSHFKSQPKGANIEEKSISESQDADASTIPADPEILPQDLLKKYITYAKLNVFPRLHDADMDKLTHVYAELRRESSYGQGVPIAVRHIESMIRMSEAHARMHLRQHVTQEDVDMAIRVLLDSFISTQKFGVQKALQKSFRKYMTFKKDYNELLLYLLRELVKNALHFEAIVSESTSGLTHIDVKVEDLYNKAQEHEIYDLNPFFSSTHFSRANFVLDIEKGVIRHRLSR | 940 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bach2g02351 | 940 | Pfam | MCM OB domain | 324 | 451 | IPR033762 | - | |
| Bach2g02351 | 940 | SUPERFAMILY | Nucleic acid-binding proteins | 225 | 473 | IPR012340 | - | |
| Bach2g02351 | 940 | MobiDBLite | consensus disorder prediction | 39 | 66 | - | - | |
| Bach2g02351 | 940 | Gene3D | - | 484 | 857 | IPR027417 | - | |
| Bach2g02351 | 940 | Pfam | MCM N-terminal domain | 224 | 317 | IPR027925 | - | |
| Bach2g02351 | 940 | Pfam | MCM AAA-lid domain | 750 | 834 | IPR041562 | - | |
| Bach2g02351 | 940 | Pfam | MCM P-loop domain | 492 | 714 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
| Bach2g02351 | 940 | ProSitePatterns | MCM family signature. | 613 | 621 | IPR018525 | GO:0003677|GO:0005524|GO:0006260 | |
| Bach2g02351 | 940 | CDD | MCM2 | 507 | 833 | - | - | |
| Bach2g02351 | 940 | FunFam | DNA helicase | 484 | 857 | - | - | |
| Bach2g02351 | 940 | FunFam | DNA helicase | 352 | 402 | - | - | |
| Bach2g02351 | 940 | Gene3D | - | 216 | 320 | - | - | |
| Bach2g02351 | 940 | MobiDBLite | consensus disorder prediction | 721 | 740 | - | - | |
| Bach2g02351 | 940 | Gene3D | - | 329 | 450 | IPR012340 | - | |
| Bach2g02351 | 940 | MobiDBLite | consensus disorder prediction | 127 | 156 | - | - | |
| Bach2g02351 | 940 | ProSiteProfiles | MCM family domain profile. | 504 | 710 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
| Bach2g02351 | 940 | Gene3D | - | 352 | 402 | - | - | |
| Bach2g02351 | 940 | PANTHER | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER | 209 | 880 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
| Bach2g02351 | 940 | MobiDBLite | consensus disorder prediction | 108 | 197 | - | - | |
| Bach2g02351 | 940 | MobiDBLite | consensus disorder prediction | 67 | 88 | - | - | |
| Bach2g02351 | 940 | PRINTS | Mini-chromosome maintenance (MCM) protein 2 signature | 453 | 464 | IPR008045 | GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775 | |
| Bach2g02351 | 940 | PRINTS | Mini-chromosome maintenance (MCM) protein 2 signature | 392 | 406 | IPR008045 | GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775 | |
| Bach2g02351 | 940 | PRINTS | Mini-chromosome maintenance (MCM) protein 2 signature | 468 | 479 | IPR008045 | GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775 | |
| Bach2g02351 | 940 | PRINTS | Mini-chromosome maintenance (MCM) protein 2 signature | 357 | 369 | IPR008045 | GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775 | |
| Bach2g02351 | 940 | PRINTS | Mini-chromosome maintenance (MCM) protein 2 signature | 334 | 351 | IPR008045 | GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775 | |
| Bach2g02351 | 940 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 514 | 837 | IPR027417 | - | |
| Bach2g02351 | 940 | FunFam | DNA helicase | 216 | 320 | - | - | |
| Bach2g02351 | 940 | Pfam | Mini-chromosome maintenance protein 2 | 38 | 195 | IPR008045 | GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775 | |
| Bach2g02351 | 940 | MobiDBLite | consensus disorder prediction | 159 | 178 | - | - | |
| Bach2g02351 | 940 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 545 | 560 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
| Bach2g02351 | 940 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 657 | 669 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
| Bach2g02351 | 940 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 633 | 646 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
| Bach2g02351 | 940 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 605 | 619 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
| Bach2g02351 | 940 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 684 | 692 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
| Bach2g02351 | 940 | SMART | mcm | 320 | 835 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
| Bach2g02351 | 940 | MobiDBLite | consensus disorder prediction | 1 | 94 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bach2g02351 | Bach-Chr2 | 29923924 | 29929166 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bach2g02351 | 1 | 935 | Core DNA Replication Machinery Family | AT1G44900 | 76.246 | 0.0 | 1382 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bach2g02351 | K02540 | - | cave:132178860 | 1585.85 |