Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g02317 ATGGATCCAGAATCATTCACCACAAACATATTTAAGTGGGACCCTCGCAGCTTCCTTCCAGTTGCAACGACTAGCCGACCTCCTATGCTGGAATACTCCATGTCGATGGCACCACCAGTACCGGCGGCGGCATATCCAGCTAGAGCGCCAAGGGAGCTGGGAGGCTTAGAGGAGTTGTTCCAAGCTTATGGCATCAGATACTATACAGCAGCCAAAATAGCAGAGCTTGGGTTCACGGTGAATACCCTTGTGGACATGAAGGACGAGGAGCTCGATGACATGATGAACAGCCTATCTCAGATTTTCCGCTGGGATCTGCTCGTTGGGGAGCGATACGGTATCAAAGCAGCCATTAGAGCTGAACGAAAACGCATAGACGAAGACGAAATCAGGCGCCGCAACCTTCTCTCCGGGGACACCACCACTACCACAACCAACGCACTCGACGCTTTATCCCAGGAAGGGTTGTCGGAGGAGCCGGTTATGCAACAAGAAAAAGAGGCGATGGGTAGCGGGGGAGGGAGCACGTGGGATGTGGTTGCAGGCGTTGGGGTGAGGAAACAACAACAGAGGAGGAGGCGAAGGACAAGAATGAAAACTGGTAGTCATGGGCATCAGAATAATGAGAATGATGATCCAGAAGAAGAAGTGGAAGAAGATGAAGAAAATGAAGGCAATGGTGGAAGCTGCGAGAGACAGAGAGAGCACCCATTCATCGTGACAGAGCCTGGGGAAGTTGCACGTGGCAAGAAGAACGGCCTTGATTACCTTTTCCACCTCTACGAGCAATGTCGGGAGTTCTTGATTCAAGTCCAGAACATAGCCAAAGACCGCGGCGAGAAATGCCCCACCAAGGTGACAAACCAGGTATTCAGGTACGCGAAGAAAGCAGGAGCAAGCTACATAAACAAGCCAAAAATGCGACACTACGTCCACTGCTACGCGTTGCACTGTCTTGACGAGGAGGTTTCGAATGAACTGAGAAGAGCTTTCAAGGAGAGAGGAGAGAACGTTGGGGCGTGGAGGCAAGCTTGCTATAAGCCACTGGTGGCTATTGCAGGACGTCAAGGTTGGGACATCGATGCCATCTTCAATGCACATCTTCATCTTTCCATTTGGTACGTCCCAACCAAGCTTCGCCAGCTTTGTCATGCCGAGAGGAACAGCGCCACTACTGCTTCTTCAACCTCCGTCTCTCTTGGGACTACACACCTCCCTTTCTAA 1224 0.5139 MDPESFTTNIFKWDPRSFLPVATTSRPPMLEYSMSMAPPVPAAAYPARAPRELGGLEELFQAYGIRYYTAAKIAELGFTVNTLVDMKDEELDDMMNSLSQIFRWDLLVGERYGIKAAIRAERKRIDEDEIRRRNLLSGDTTTTTTNALDALSQEGLSEEPVMQQEKEAMGSGGGSTWDVVAGVGVRKQQQRRRRRTRMKTGSHGHQNNENDDPEEEVEEDEENEGNGGSCERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKDRGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEVSNELRRAFKERGENVGAWRQACYKPLVAIAGRQGWDIDAIFNAHLHLSIWYVPTKLRQLCHAERNSATTASSTSVSLGTTHLPF 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g02317 407 MobiDBLite consensus disorder prediction 226 241 - -
Bach2g02317 407 Pfam Floricaula / Leafy protein SAM domain 52 129 IPR035079 -
Bach2g02317 407 MobiDBLite consensus disorder prediction 162 243 - -
Bach2g02317 407 PANTHER PROTEIN LEAFY 1 406 IPR002910 GO:0003677|GO:0006355
Bach2g02317 407 MobiDBLite consensus disorder prediction 187 201 - -
Bach2g02317 407 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 225 391 IPR035209 GO:0003677
Bach2g02317 407 MobiDBLite consensus disorder prediction 211 225 - -
Bach2g02317 407 Gene3D Protein LEAFY 228 397 IPR038276 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g02317 Bach-Chr2 29707905 29710286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g02317 1 389 Orphan Transcription Factor Family AT5G61850 64.691 2.97e-160 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Bach2g02317 C_LFY_FLO 1e-106 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g02317 - - qsa:O6P43_030646 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach2g02317 2 29707905 29710286 Bach2g02317 2 29707905 29710286 ECH