Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g02315 ATGCCTTTTGAAATAATGGATCAAAGGGGAGCATCTGCCTCATCCCACTTTTTTGAAGACATCTCCTTTCGATCTGAGAGGGATGTTGGATTGCAGAAGCCAAAACCCAACCTTGATCACTACCAACAAGGTAAGAATGGTATGGTGGCATCACAAAGCAGCATTTTGAATGCTTCATCACACCAGGAAAAAAGTATGAAGACAGGCTTGCCAATGCCACAGATAGTTTTATCTGGAAAAAGTACAGAAAACCTACATATTGGGGGAGAAGAAGGCATCATGGATATGTTGAAGTCTTCTGAGGAATCCCTGAATCATTATCCCAGATCATGGTCTAATGTTTGTGCACAGCCAGCATCTAGCTCATGTGGTTTAATTGGAAACAAGATTGTCACTGATGCTGCCTCCCGTGAAAGTAGTCTATTCTCAAGTTCACTATCTGAGATGTTTAGCCAAAAGTTGAGGTTAATGAGGAATGATGTTCTATCTCATCAACCCCTTACTGTTGGTTCCCCTCCTGATAAAGAACCTTATGTACCTCTTGAAGAGATTGAGGCTGAGACTATTGGGAATCTCCTTCCTGATGAAGATGATCTATTTTCTGGTGTCATTGATGAGTTAGGACACAATGCTTATGCCAGGGCAAGTGATGACTTGGAAGATTTTGATTTGTTTAGTAGCAGTGGGGGCATGGAGCTGGAAGGGGAAGAACATCAAAGTTCAGGAAAAAGAATTGCTGGTCTGGATGGAGATTCTGTTTACTTGGGAGGTTCTAAAGGGAAGCTTCCTTTTGGTGGACAACCTTCTAGAACACTTTTTGTTAGAAACATCAATAGCAGTGTTGAAGATTCTGAATTAAAGGCTCTCTTTGAGCAACACGGAGATATCCGAACCACTTATACGGCTTGCAAGCATCGTGGCTTTGTTATGATTTCTTATTATGATCTAAGAGCAGCACAGAGTGCAATGAAAGCACTTCAAAACAGGTCATTGAGGTCTAGGAAACTTGACATACATTATTCTATCCCAAAGGTAAATGCTCCAGAGAAGGATATTAGCCATGGTACACTGGTGCTATCCGGTCTTGATTCTTCTGTGTCAAATGATGAGCTTCATCAGATTTTTAGATTTTATGGAGAAGTTAAAGAAATCTATGAAACTCCAGAAGCTAATCATTACAAGTTTATAGAGTTTTATGATGTTCGAGCTGCAGAAGCTGCTCTTCATGCATTGAACAGAAGTGACATTGCTGGGAAACAGATCAAGCTTGAACCAGGCCATCCAAGGGCTGCAACATGCATGATGCAGCAGTCTCAGAAGGGGCACGATGAACTTGATATTGGTCAAAGTCTTTGTGACAACTTGTCATTAAGACAGAAGGCAGCAATGCCTCCTGGAGTTGGCTGCTTGGATAATGGATCCAATCAAGGATTTCAATCTGCAATGGGACTTCCTATGAATGCATTTATTGATAATGCATTCTCTCATGGAAATTCTGGCATTCAGAATGCAGTGAGGGGGGCATCTGCTGGAAAAGCACCTGGTGTTTCTGAACCCAGTAACTTTGCTGATGCAATGAAATTTGCATGCCTTTCAAGATTCCATCCTCATTCCTTCCCTGAGTATCATGATGGTTTAGCTAATGGCAGTCCTTACAACTTCCCGAGCACTATTAGCAATATGGTTGGCAATATTCATACTGGTGTGAGAGAAGGATCTGATAACAGGAACATTCAAGGGATGGGTTCAACTGGGAGCCCCATGGAATTTAATGGAGGAAATGGGAGCCGCCCACGCCCTGGACTCTATCACATGTGGAACAGCTCCAATCTGCATCAGCAATCTCCATCAAGTCCCATGCTTTGGCAGAAAGCACCATCATTTGCTAATGGTGCTTGTGCTCCAAGCCTTCCACAAATGTCCAACTTTCCTAGGACACCGCCTCATATGTTGAAGGCATCAAATATAGAGCACCATGTTGGATCTGCACCGGTTGTTACAGCTTCCCCCTGGGACAGGCAGTATTCTTATTTGGGAGAGTCTCCTGAAGCTTCTGGTTTTCATTTGGGTTCTCTGGGGAGTACAGGCTTTCCTCGTTCTTGGCAATTGCATCCCCAGGATTTTTCTTCTCAGAACATGCTTTCTCATGTTGGGGGAAATGGTACAGAATTTATGCCCAATACCGGGCAGAGCTCTCCTAAGCAATTGTCACATGTTTTCCCTGGGAGACATGCCATGGCTCCAATGTCAAAATTTGATTCTACCAATGAGCGAATGAGAAACCTTAATCACCGAAGAAGTGAAGCAAATACTAATAGTGCAGACAAAAAGCAATATGAACTAGACCTTGGCCGCATATTACGTGGGGAAGACAACCGAACAACACTTATGATAAAGAATATTCCCAACAAGTATACTTCAAAAATGCTTCTTGCTGCCATAGATGAGCAGTGTCGGGGAACTTATGATTTTCTGTATTTGCCAATCGACTTTAAGAACAAATGTAATGTTGGCTATGCATTCATCAATATGATTGATCCTGGTCAGATTATTCCATTTCATCAGGCATTCAATGGGAAAAAATGGGAGAAGTTTAACAGTGAGAAGGTAGCTTCACTAGCATATGCTCGAATTCAGGGAAAATATGCTCTGATTGCTCATTTCCAGAACTCAAGCTTGATGAATGAAGATAAACGCTGCCGCCCTATCCTTTTCCATACAGACGGCCCGAATGCCGGTGATCCGGAACCTTTCCCCATGGGCACCAACATTAGATTGAGACCTGGAAAATCTCGCAGTTGTGGTAATGATGAAAATCGCAGCCAAGGGAGCCCTTCAACTCTGGCAAGTGGTGAGGAGTCTACTAATGGAATGGATTCTTCAAGAAACTCTGACTAACTTAACCTCGGCCGCTAACCGTTCAACCTTTTGCATCTGAGTACATGTCATATATCAACTCCAGTTCTGTATATTGGCATTTTGTTTTTGTTAGGCAGAGAAGAGTTGGATTGGAGCTTAGAGGAAAGGGGCCTCAAAATTTTTGCCTATAGAGAAGCACTGACACAAGTTTTCAGAGGCTGAGGTACATAAACAGAACGAAGAAGCAACTGATTTTAATTTTAGTATTTTTCTTTATGTCCCTAAATTTTTTTATCGAGTCCTTTTTTTACCGTCTTCCGGTTTTAGAGAATGGCTTTCAACTGAAGCTCAAAATTTTGGCTAGCTATGATTGGATGATTTTATCAGTATTCGAGCAATGCTTTCCCATCCCTTCTTTGTATTGTGAGCTTCCTAGGG 3297 0.4225 MPFEIMDQRGASASSHFFEDISFRSERDVGLQKPKPNLDHYQQGKNGMVASQSSILNASSHQEKSMKTGLPMPQIVLSGKSTENLHIGGEEGIMDMLKSSEESLNHYPRSWSNVCAQPASSSCGLIGNKIVTDAASRESSLFSSSLSEMFSQKLRLMRNDVLSHQPLTVGSPPDKEPYVPLEEIEAETIGNLLPDEDDLFSGVIDELGHNAYARASDDLEDFDLFSSSGGMELEGEEHQSSGKRIAGLDGDSVYLGGSKGKLPFGGQPSRTLFVRNINSSVEDSELKALFEQHGDIRTTYTACKHRGFVMISYYDLRAAQSAMKALQNRSLRSRKLDIHYSIPKVNAPEKDISHGTLVLSGLDSSVSNDELHQIFRFYGEVKEIYETPEANHYKFIEFYDVRAAEAALHALNRSDIAGKQIKLEPGHPRAATCMMQQSQKGHDELDIGQSLCDNLSLRQKAAMPPGVGCLDNGSNQGFQSAMGLPMNAFIDNAFSHGNSGIQNAVRGASAGKAPGVSEPSNFADAMKFACLSRFHPHSFPEYHDGLANGSPYNFPSTISNMVGNIHTGVREGSDNRNIQGMGSTGSPMEFNGGNGSRPRPGLYHMWNSSNLHQQSPSSPMLWQKAPSFANGACAPSLPQMSNFPRTPPHMLKASNIEHHVGSAPVVTASPWDRQYSYLGESPEASGFHLGSLGSTGFPRSWQLHPQDFSSQNMLSHVGGNGTEFMPNTGQSSPKQLSHVFPGRHAMAPMSKFDSTNERMRNLNHRRSEANTNSADKKQYELDLGRILRGEDNRTTLMIKNIPNKYTSKMLLAAIDEQCRGTYDFLYLPIDFKNKCNVGYAFINMIDPGQIIPFHQAFNGKKWEKFNSEKVASLAYARIQGKYALIAHFQNSSLMNEDKRCRPILFHTDGPNAGDPEPFPMGTNIRLRPGKSRSCGNDENRSQGSPSTLASGEESTNGMDSSRNSD 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g02315 965 CDD RRM1_MEI2_like 269 344 IPR034453 -
Bach2g02315 965 MobiDBLite consensus disorder prediction 905 965 - -
Bach2g02315 965 Gene3D - 259 353 IPR012677 -
Bach2g02315 965 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 355 428 IPR000504 GO:0003723
Bach2g02315 965 PANTHER RNA RECOGNITION MOTIF-CONTAINING 53 960 - -
Bach2g02315 965 CDD RRM3_MEI2_like 796 881 IPR034454 -
Bach2g02315 965 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 357 422 IPR000504 GO:0003723
Bach2g02315 965 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 272 336 IPR000504 GO:0003723
Bach2g02315 965 MobiDBLite consensus disorder prediction 935 965 - -
Bach2g02315 965 Pfam RNA recognition motif 2 793 889 IPR007201 -
Bach2g02315 965 Coils Coil 752 772 - -
Bach2g02315 965 Gene3D - 354 447 IPR012677 -
Bach2g02315 965 SMART rrm1_1 271 339 IPR000504 GO:0003723
Bach2g02315 965 SMART rrm1_1 795 871 IPR000504 GO:0003723
Bach2g02315 965 SMART rrm1_1 356 424 IPR000504 GO:0003723
Bach2g02315 965 SUPERFAMILY RNA-binding domain, RBD 268 428 IPR035979 GO:0003676
Bach2g02315 965 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 270 343 IPR000504 GO:0003723
Bach2g02315 965 FunFam Protein MEI2-like 1 354 448 - -
Bach2g02315 965 SUPERFAMILY RNA-binding domain, RBD 795 879 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g02315 Bach-Chr2 29676050 29682365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g02315 267 425 Eukaryotic Initiation Factors Gene Family AT1G49760 22.619 2.94e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g02315 - - gmx:100797893 1410.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach2g02315 2 29676050 29682365 Bach2g02315 2 29676050 29682365 ECH