Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g02271 ATGGGGAGAGGGAAGGTGGAGCTGAAAAGAATAGAGAACCCAACAAATAGACAGGTAACCTTCTCAAAGAGGAGGAATGGGCTGATAAAGAAGGCCTTTGAGCTCTCCATCCTATGCGATGCTGAAGTTGCCCTTGCCATCTTCTCTTCCTCTGGAAAACTTTTCCATTTTGCTAGCCATGACATGCATAGGACCATTTCAAGGTACCGTCATGAAATAGGAATACCCCAGCCCAATATCTCTCGCTTAAGAACGATGGAGAGTTGGAGGAGTGAAATTGACGAGTTAAGGAGAACAGTAGGCAACTTGGAAACAAGACTCAAGCATTTAGCAGGAGAAGATCTGTCAACATTGGGTGTGAAAGAATTGAAACAGCTAGAGCGACAGTTGAAGACAGGGGTTCAACGCATTCATTCTCGAAAGAGACGCCTCATTTCAGAGAACGTGAACATGCTCAGAAGAAGGATTAGACTCCTGCAAGAGGATAACACTCATCTTCAGAAAAGATTGAAAGAATTGGATACCCTAAATGCAAGCTCCATAAATCTTACTCAAGTGTGGCCATACGATGCATTTCAGAGGATTGTCCAGGATGAAGCCCAGCCTTAA 609 0.4417 MGRGKVELKRIENPTNRQVTFSKRRNGLIKKAFELSILCDAEVALAIFSSSGKLFHFASHDMHRTISRYRHEIGIPQPNISRLRTMESWRSEIDELRRTVGNLETRLKHLAGEDLSTLGVKELKQLERQLKTGVQRIHSRKRRLISENVNMLRRRIRLLQEDNTHLQKRLKELDTLNASSINLTQVWPYDAFQRIVQDEAQP 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g02271 202 Gene3D - 14 73 IPR036879 GO:0003677|GO:0046983
Bach2g02271 202 Coils Coil 142 176 - -
Bach2g02271 202 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bach2g02271 202 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bach2g02271 202 SUPERFAMILY SRF-like 2 78 IPR036879 GO:0003677|GO:0046983
Bach2g02271 202 Coils Coil 86 113 - -
Bach2g02271 202 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Bach2g02271 202 CDD MADS_MEF2_like 2 74 IPR033896 GO:0000977|GO:0045944
Bach2g02271 202 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bach2g02271 202 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bach2g02271 202 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bach2g02271 202 ProSiteProfiles K-box domain profile. 86 176 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach2g02271 202 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 168 - -
Bach2g02271 202 Pfam K-box region 85 170 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g02271 Bach-Chr2 29336648 29338565 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g02271 1 187 MADS-box Gene Family AT3G58780 42.268 3.49e-49 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Bach2g02271 K-box 2.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g02271 K09264 - dcr:108226624 263.848