LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach2g02248	ATGGAGGGCGTGATTGAGGTCGAGTCCGGTGCACACTTCTCTGGTTGGCGTCCCGATGGCATCATTGACCCTTCCACGACGTCGTCTTGTTCATTGCCTCAATCATCACCACTCGGTTGCCCCACCGCCCCCAAGCAGCCTTTTGTAATCGGGGTCTCTGGAGGTACCGCATCAGGCAAGACGACTGTGTGTGACATGATTATTCAACAACTGCAAGATCATAGAGTTGTGCTCGTTAGTCAGGATTCATTCTACCGTGGTTTAACTGAAGATGAAATGAAACACGTCCATGAATATAATTTTGATCATCCTGACGCATTTGATACTGAACAACTTGTAGAGTGTATCACCAAACTCAAGTCTGGAGAGTCTGTTCAGGTTCCAATCTATGATTTTAAGCACCACCGTCGATGTTCTGACAATTTCCGGCAGGTAGTCAATGCATCTGAGGTAATCATTTTGGAGGGTATATTGGTTTTTCATGAACAACGTGTTCGCAACATGATGAATATCAAATTATTTGTTGATGCAGATGCTGATGTAAGGCTTGCTCGCAGAATAAGACGTGATACTGTTGAGAGGGGTAGAGATGTACACTCTGTTCTGGGACAGTATGCTAAATTTGTCAAGCCTGCCTTCGATGATTTTATTCTTCCATCCAAAAAGTACGCCGACATCATTATACCTCGTGGAGGAGAGAATCGTGTAGCAATCGACTTGATTGTTCAACACATCCGCACTAAGCTTGGCCAACATAACCTCTGCAAGATATATCCAAATTTGCATGCTATCCACTCAACGTTCCAGATTAGAGGCATGCACACTCTTATCCGTGACAGGGAAATATCAAAGCATGATTTTATCTTTTATTCAGATCGGCTAATTCGTCTGGTAGTGGAACATGGTCTTGGTTACTTGCCATTTACAGAGAAGCAGATTATCACACCTACAGGGTCAATTTATACTGGAGTAGATTTTTGTAAGAAATTGTGTGGAGTATCCATTATTCGAAGTGGTGAAAGCATGGAGAATGCGTTGCGTGCATGCTGTAAGGGAATAAAAATAGGCAAAATCCTCATCCACCGCCAAGGTGATGAGACCCAGCTGATATATGAGAAGCTCCCAAAAGACATTTCAGAGAGACATGTTCTCCTTATGGACCCAGTACTTGGTACAGGTAATACGGCCAGCCAAGCTATTGAACTTCTCATACAGAAGGGAGTTCCGGAGTCCCGGATAATATTCCTCAACCTCATCTCTGCCCCCGAGGGAATACATTACGTTTGTAAACGCTTCCCGTACCTAAAAATCGTCACCTCGGAGATTGAAGATGGATTAAACGACGAGTTCCGTGTCATACCAGGGTTGGGAGAATTCGGTGACCGCTATTTTGGTACGGACGACTCTTAA	1410	0.4426	MEGVIEVESGAHFSGWRPDGIIDPSTTSSCSLPQSSPLGCPTAPKQPFVIGVSGGTASGKTTVCDMIIQQLQDHRVVLVSQDSFYRGLTEDEMKHVHEYNFDHPDAFDTEQLVECITKLKSGESVQVPIYDFKHHRRCSDNFRQVVNASEVIILEGILVFHEQRVRNMMNIKLFVDADADVRLARRIRRDTVERGRDVHSVLGQYAKFVKPAFDDFILPSKKYADIIIPRGGENRVAIDLIVQHIRTKLGQHNLCKIYPNLHAIHSTFQIRGMHTLIRDREISKHDFIFYSDRLIRLVVEHGLGYLPFTEKQIITPTGSIYTGVDFCKKLCGVSIIRSGESMENALRACCKGIKIGKILIHRQGDETQLIYEKLPKDISERHVLLMDPVLGTGNTASQAIELLIQKGVPESRIIFLNLISAPEGIHYVCKRFPYLKIVTSEIEDGLNDEFRVIPGLGEFGDRYFGTDDS	469

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach2g02248	469	Gene3D	-	43	251	IPR027417	-
	Bach2g02248	469	CDD	UMPK	49	248	IPR000764	-
	Bach2g02248	469	NCBIfam	uridine kinase	47	248	IPR000764	-
	Bach2g02248	469	Gene3D	-	252	466	IPR029057	-
	Bach2g02248	469	Pfam	Uracil phosphoribosyltransferase	266	466	-	-
	Bach2g02248	469	PRINTS	Uridine kinase signature	180	190	-	-
	Bach2g02248	469	PRINTS	Uridine kinase signature	122	137	-	-
	Bach2g02248	469	PRINTS	Uridine kinase signature	216	229	-	-
	Bach2g02248	469	PRINTS	Uridine kinase signature	77	88	-	-
	Bach2g02248	469	PRINTS	Uridine kinase signature	47	64	-	-
	Bach2g02248	469	PRINTS	Uridine kinase signature	194	205	-	-
	Bach2g02248	469	FunFam	Uridine kinase	252	466	-	-
	Bach2g02248	469	CDD	PRTases_typeI	325	439	IPR000836	-
	Bach2g02248	469	PANTHER	URIDINE KINASE	44	377	-	-
	Bach2g02248	469	Pfam	Phosphoribulokinase / Uridine kinase family	49	236	IPR006083	GO:0005524\|GO:0016301
	Bach2g02248	469	FunFam	Uridine kinase	44	251	-	-
	Bach2g02248	469	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	43	241	IPR027417	-
	Bach2g02248	469	SUPERFAMILY	PRTase-like	251	467	IPR029057	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach2g02248	Bach-Chr2	29180600	29185536	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach2g02248	1	468	PRT Gene Family	AT5G40870	77.568	0.0	749

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach2g02248	K00876		-	qsa:O6P43_022560	791.186