LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach2g02239	ATGGCGGGAATATGGGTCGAGCCATGCAGGCGGCTGGTATCGGTTGGCGGTGGCGATCGTGGTTCTAATCGCTGTCAATCTTTCATCCTTTCATTCTCCGTTGGTGTCTGTGTCGCCGGGCGATACGGTGTTTCAAGAAGGAGGGAGTCTCACGAATATAGTTCCGATAAGGAATTTGATCATTACAGGAATGGGTCTTCTGGCGTGCAAGTGCGGTCTCGTAAACACCACGTTACAGATCAGAATGCACGTCCATCTTCTCCTGTTGTGCAGAATTCTGATTCTGGTCGAAATGGGTTATATGGAAGAAAAGAGGAGAGGAAGCAAGGAGAAATCTATGCTGAACATGATGCTTTGGTGCCGCCCGAGAAGAGAAGGAAGGTTTCTCCGATTGTATGGGACCTAGGAGAGAAAGAAGTAAGAATATCTTCCAAAAATAGGATCACACAGGTTATTTCTCTTTCTCCTACTTATCAATCTCTTCCAGGCACTGAGGAAGCCAATGGCGTACTGCATGGGGATGTTTCCTTGCTCAAGTCTCCAGCTGATTTGTCTTGTGCAATGCCTCAAGAACATTCAAGCAATGGTAATCAAGATGTTAATCAGGTTGGAGAAAATTGTGTGCAAGGATGGAACATTGCAATGTCAAGGTGGGCCTTTGATGGCCATTCACCAAGGGCTGCATCCGATGATGAAGTCATTCATGGAGCAGAGAGCTCAAGTCCTGAAAGTGGTGAATTTCGAAGAGAAAGTTCTGAAGGCAAAACATCTAGATCATCAGGAAGCAGTGGAGGAAGTCGTTATTTGGGCGCATCTACTGATGATACTAATTCTGGAAAGGAGTTTTCAATTGCTGACTCTATGGACTTCGAAGAGGAGCATGGTGAAACCGCCTATCTTAGTGACCAATCATCAGATTCAGATGATAATGGCAGTTTAATACAGGTACGAAGAAAGATTAATATGGTTCAGAGTTGCAGAAGTATATTTGAATTTGAAATGATTAAGAAGATAAATGAAGGAACTTATGGTATAGTCTATAAAGCTAGGGATAAGAAGTCCGGTGAAATCGTAGCGTTAAAGAAGGTGAAGATGAACATAGATAGGGATGGATTTCCGTTGTCATCCTTGAGAGAAATCAACATTCTCCTGTCTTTTAATCATCCTTCCATTGTGGATGTTAAAGAAGTAGTTGTGGATAATTTTGACGGTGTTTTCATGGTAATGGAGTACATGGAATATGACCTCAAGGGGCTGATGGAGGAAGTGAAGCAGCCCTTTAGCATAGGGGAAGTAAAATCCTTAATGTGGAAGCTCCTGGAGGGTGTCAAATATATCCATGATAACTGGGTCCTACACAGAGACTTGAAGACATCGAATATTCTTCTAAATAAAGACGGGGAGTTGAAAATATGTGACTTTGGATTATCTCGCCAGTATGCAAGCCCACTGAAGCCATATACTCCTGTCGTGGTTACTCTATGGTACAGAGCACCTGAGCTTTTATTAGGGGCTAAAGAGTATTCAACAGCTATTGATCTGTGGTCGGTGGGTTGCATAATGGCTGAATTAATTGCCAAGGAGCCTCTGTTCAAGGGAAAAACGGAAGTTGAACAGCTTGATAAGATTTTTCGAATATTAGGCACACCCGATGAGGTGATGTGGCCTGGGTTTTCCAAATTACGTGGATCCAAAGCTAAAGCTAATTTTGTTAAGCAACCGTATAATTTGTTACGGAAGAAGTTTCCAGCTGCATCTTTTACAGGTTCGCCAGTTCTCTCAGAATTGGGATTTGACTTGTTGAGCAAACTTCTCACTTATGACCCTGAGAAGAGAATAACTGCTGAGGATGCTCTTGCTCACGATTGGTTCCGTGAAGCCCCTCTTCCTAAAAACGATTTCAGGCCGGCTTTTCCCTCCTGCCGTGAACAATGTGATAAGCAAAGGGCAGGGATCTACCTGTTGGACGCTGCTTTGATAAAATTAGAAAGCAGCTCATCAATGCATTGGTTTGAGAAGGATTTTTCTTGA	2031	0.4318	MAGIWVEPCRRLVSVGGGDRGSNRCQSFILSFSVGVCVAGRYGVSRRRESHEYSSDKEFDHYRNGSSGVQVRSRKHHVTDQNARPSSPVVQNSDSGRNGLYGRKEERKQGEIYAEHDALVPPEKRRKVSPIVWDLGEKEVRISSKNRITQVISLSPTYQSLPGTEEANGVLHGDVSLLKSPADLSCAMPQEHSSNGNQDVNQVGENCVQGWNIAMSRWAFDGHSPRAASDDEVIHGAESSSPESGEFRRESSEGKTSRSSGSSGGSRYLGASTDDTNSGKEFSIADSMDFEEEHGETAYLSDQSSDSDDNGSLIQVRRKINMVQSCRSIFEFEMIKKINEGTYGIVYKARDKKSGEIVALKKVKMNIDRDGFPLSSLREINILLSFNHPSIVDVKEVVVDNFDGVFMVMEYMEYDLKGLMEEVKQPFSIGEVKSLMWKLLEGVKYIHDNWVLHRDLKTSNILLNKDGELKICDFGLSRQYASPLKPYTPVVVTLWYRAPELLLGAKEYSTAIDLWSVGCIMAELIAKEPLFKGKTEVEQLDKIFRILGTPDEVMWPGFSKLRGSKAKANFVKQPYNLLRKKFPAASFTGSPVLSELGFDLLSKLLTYDPEKRITAEDALAHDWFREAPLPKNDFRPAFPSCREQCDKQRAGIYLLDAALIKLESSSSMHWFEKDFS	676

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach2g02239	676	SMART	serkin_6	332	624	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach2g02239	676	MobiDBLite	consensus disorder prediction	256	281	-	-
	Bach2g02239	676	MobiDBLite	consensus disorder prediction	82	98	-	-
	Bach2g02239	676	SUPERFAMILY	Protein kinase-like (PK-like)	326	630	IPR011009	-
	Bach2g02239	676	Gene3D	Transferase(Phosphotransferase) domain 1	414	647	-	-
	Bach2g02239	676	FunFam	Cyclin-dependent kinase G-2	414	651	-	-
	Bach2g02239	676	ProSiteProfiles	Protein kinase domain profile.	332	624	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach2g02239	676	MobiDBLite	consensus disorder prediction	224	255	-	-
	Bach2g02239	676	CDD	STKc_CDC2L1	326	624	IPR045267	GO:0004674\|GO:0005524\|GO:0006468
	Bach2g02239	676	MobiDBLite	consensus disorder prediction	53	108	-	-
	Bach2g02239	676	Pfam	Protein kinase domain	332	624	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach2g02239	676	PANTHER	CELL DIVISION PROTEIN KINASE	331	630	-	-
	Bach2g02239	676	FunFam	cyclin-dependent kinase G-2 isoform X1	317	413	-	-
	Bach2g02239	676	MobiDBLite	consensus disorder prediction	224	281	-	-
	Bach2g02239	676	Gene3D	Phosphorylase Kinase; domain 1	315	413	-	-
	Bach2g02239	676	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	451	463	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach2g02239	Bach-Chr2	29128211	29132259	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach2g02239	323	630	Core Cell Cycle Gene Families	AT5G10270	43.827	2.97e-82	267

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_CDK-PITSLRE	Bach2g02239		Pkinase	1.6e-72	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach2g02239	K08818		-	gmx:100788840	713.761