Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bach2g02220 | ATGGAGCCCTCCGAATCTGAATCCACTGTTATTTCGAATTCCAGCGAAGACCGAGACTTGGGTTTTCAGTCGGCACCTTCTTCCCCCAGTCCCGATCACGATTGTGAAACGTCAGATCTCAATCACCAGGCAGAGGCCGATGTACTTCATGGGGAGCTTCAGAACAAGTTAGATTTGAAGGATAAGGAGGAGGAACCCGAGACCGAGAAGAAAGTTTCCGAATTTAATGATGGTCAGCAAGTAAGTATTCAAGTGGGTGCTGAAGAATCTGGTAACGGAGATGGGTGGGATGAAGATAACAGCAATTGGAATGGAAATGGGAGCAATAATTGGAATGAGCATGCGAAAGAGACTGAGAATGATTGGGTGGTTAGAGATGTTGATGTAACTGTCGGTGAAGAAGAGGAGAAGAAAGACGAGAGAAGCAGCGGTAGAACACGCCTGTACCCGGTGAGGCCCGAAGCTGAAGATTGTGCATTCTATCTAAAGACTGGAACTTGCAAGTTTGGATTCAATTGCAAGTTTAATCACCCTGTTAGGAGGAAAAATCAGGCTGTTCAGGATAAAGCAGGGGAAAGAGAAGAATCAACAGAAAGGCAGGGACAGGCAGAATGCAAGTATTATCTAAGGTCAGGGGGTTGTAAGTTTGGAAAAGCTTGTAAATATAACCACGCAAGTTCAGCAGCCACAATTCTAGAGCTTAACTTTCTGGGCCTGCCTATCCGTCTGGGGGAGAAAGAGTGCCCCTATTACATGCGTAATGGCTCTTGCAAGTTTGGATCTAACTGTAAGTTTAATCACCCTGATCCTACGGCTGTTGGAGGAGGTGATCCTCCTTCTGGGTATGGTAATGGCGGGCACATTTCATTGCACGGTGCTTCACAACCGTCTATACCCTCCTGGTCTTCTCCAAGAACAGTAAATGAGGCTGCTCCTTTTGTGCCAATGATACTTTCACCGACTCAAGGGGTTTCTCCCCAGAGTTCTGATTGGAATGGATACCAGGCACCTGTCTACCTGTCTGAGAGGAGTATGCATCCACCTTCTACATATGTCGTGAACAACCCAGCCATTGAAACAAATGTTTATGTTCATCATCAAAAGCAGATGCAAGTTGATGAGTTTCCAGAAAGGCCCGGTGAACCTGAATGCACTTACTTCTTGAAAACTGGGGATTGCAAGTTCAAATCAAATTGTAAATTTCACCATCCAAAGAATCGGGTTGCAAGACCACCTCCATGTACCCTCAGTAACAAGGGTCTTCCTTTAAGACCTGACCAGAATATCTGCTCACATTACAGTCGCTATGGAATTTGCAAATTTGGACCAGCTTGTAAGTTTGACCACCCAATACAAACAATATCCTCAACTATGCCTGTACTTGATCAGCAATCTTCCTTCCCCAACTCTTCTGGTGTAGAAATCGGTGGTCTAGCTGGAAGTGGAGGTGCAAGTGATTTGGCGTTTCAGCCAACTCTGTAAACATTCTCTTCTAGCTTTAAGAATGGAGATTACCCAGAATCTGTTAATTTTCTTATTAGACGTGGTAAGTTATCAACTCTCCGGTTCTGCACAAGCTTTGCAGAGAAGAGCAATATATGTCAGGCACATGTTTTAATACATGTAATATCAGCATTTGTAAATTATCTTTGTTCTTTTTTTTTTTTTATTCTTTTGAACTAGGATCCTTGTTAGATTCTAGCTTGGTTGGTTTGAAATTCCGGTGAATGTTTA | 1734 | 0.4366 | MEPSESESTVISNSSEDRDLGFQSAPSSPSPDHDCETSDLNHQAEADVLHGELQNKLDLKDKEEEPETEKKVSEFNDGQQVSIQVGAEESGNGDGWDEDNSNWNGNGSNNWNEHAKETENDWVVRDVDVTVGEEEEKKDERSSGRTRLYPVRPEAEDCAFYLKTGTCKFGFNCKFNHPVRRKNQAVQDKAGEREESTERQGQAECKYYLRSGGCKFGKACKYNHASSAATILELNFLGLPIRLGEKECPYYMRNGSCKFGSNCKFNHPDPTAVGGGDPPSGYGNGGHISLHGASQPSIPSWSSPRTVNEAAPFVPMILSPTQGVSPQSSDWNGYQAPVYLSERSMHPPSTYVVNNPAIETNVYVHHQKQMQVDEFPERPGEPECTYFLKTGDCKFKSNCKFHHPKNRVARPPPCTLSNKGLPLRPDQNICSHYSRYGICKFGPACKFDHPIQTISSTMPVLDQQSSFPNSSGVEIGGLAGSGGASDLAFQPTL | 493 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bach2g02220 | 493 | MobiDBLite | consensus disorder prediction | 274 | 305 | - | - | |
Bach2g02220 | 493 | ProSiteProfiles | Zinc finger C3H1-type profile. | 152 | 180 | IPR000571 | GO:0046872 | |
Bach2g02220 | 493 | ProSiteProfiles | Zinc finger C3H1-type profile. | 424 | 452 | IPR000571 | GO:0046872 | |
Bach2g02220 | 493 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 380 | 405 | IPR000571 | GO:0046872 | |
Bach2g02220 | 493 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 427 | 450 | IPR000571 | GO:0046872 | |
Bach2g02220 | 493 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 201 | 224 | IPR000571 | GO:0046872 | |
Bach2g02220 | 493 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 156 | 178 | IPR000571 | GO:0046872 | |
Bach2g02220 | 493 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 245 | 268 | IPR000571 | GO:0046872 | |
Bach2g02220 | 493 | SUPERFAMILY | CCCH zinc finger | 422 | 450 | IPR036855 | GO:0046872 | |
Bach2g02220 | 493 | ProSiteProfiles | Zinc finger C3H1-type profile. | 378 | 406 | IPR000571 | GO:0046872 | |
Bach2g02220 | 493 | MobiDBLite | consensus disorder prediction | 35 | 74 | - | - | |
Bach2g02220 | 493 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
Bach2g02220 | 493 | PANTHER | PROTEIN PHOSPHATASE RELATED | 15 | 463 | - | - | |
Bach2g02220 | 493 | SUPERFAMILY | CCCH zinc finger | 383 | 407 | IPR036855 | GO:0046872 | |
Bach2g02220 | 493 | SUPERFAMILY | CCCH zinc finger | 151 | 180 | IPR036855 | GO:0046872 | |
Bach2g02220 | 493 | Gene3D | - | 364 | 453 | - | - | |
Bach2g02220 | 493 | Gene3D | - | 190 | 272 | - | - | |
Bach2g02220 | 493 | ProSiteProfiles | Zinc finger C3H1-type profile. | 199 | 227 | IPR000571 | GO:0046872 | |
Bach2g02220 | 493 | SUPERFAMILY | CCCH zinc finger | 243 | 269 | IPR036855 | GO:0046872 | |
Bach2g02220 | 493 | ProSiteProfiles | Zinc finger C3H1-type profile. | 242 | 270 | IPR000571 | GO:0046872 | |
Bach2g02220 | 493 | SMART | c3hfinal6 | 242 | 269 | IPR000571 | GO:0046872 | |
Bach2g02220 | 493 | SMART | c3hfinal6 | 378 | 405 | IPR000571 | GO:0046872 | |
Bach2g02220 | 493 | SMART | c3hfinal6 | 199 | 226 | IPR000571 | GO:0046872 | |
Bach2g02220 | 493 | SMART | c3hfinal6 | 152 | 179 | IPR000571 | GO:0046872 | |
Bach2g02220 | 493 | SMART | c3hfinal6 | 424 | 451 | IPR000571 | GO:0046872 | |
Bach2g02220 | 493 | MobiDBLite | consensus disorder prediction | 290 | 305 | - | - | |
Bach2g02220 | 493 | MobiDBLite | consensus disorder prediction | 96 | 113 | - | - | |
Bach2g02220 | 493 | SUPERFAMILY | CCCH zinc finger | 203 | 226 | IPR036855 | GO:0046872 | |
Bach2g02220 | 493 | Gene3D | - | 110 | 189 | - | - | |
Bach2g02220 | 493 | MobiDBLite | consensus disorder prediction | 1 | 126 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bach2g02220 | Bach-Chr2 | 28998526 | 29002800 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bach2g02220 | 374 | 476 | C2H2 Transcription Factor Family | AT3G02830 | 44.660 | 5.56e-22 | 95.9 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C3H | Bach2g02220 | zf-CCCH | 9.5e-09 | CL0537 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bach2g02220 | - | - | gmx:100786894 | 625.55 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bach5g00239 | 5 | 1688918 | 1692783 | Bach2g02220 | 2 | 28998526 | 29002800 | BWGD | |
Bach5g00239 | 5 | 1688918 | 1692783 | Bach2g02220 | 2 | 28998526 | 29002800 | ECH | |
Bach2g02220 | 2 | 28998526 | 29002800 | Bach2g02220 | 2 | 28998526 | 29002800 | ECH |