Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g02201 ATGTCTATCACTATTATACCTGCCCTCAAGACCTTTTCAATGGCAGAATCATGCCTACTCTCTTTGCCCTCAATCTGTTTCTGCAAAACCAAATATCCTCATTTCTCAACTGTTTCCAAATCCCTTAAGCTCCAAGCCTCTTGCTCCAATTCTTCACTATTTATACCATCTTTGTCTCTCAGCAGGAAAACCCATTATTCCTCTATAGTCACATTTGTAACTCAGACGTCGGATTGGGCTCAACAAGGAGAAGACAACACACTCGCCGTTGAAGAGGAAGAAGCAGAGTTAGATGAGTCAACATGGGAAAATCAGGAGGAGGATGGAGCCGAAGCTCGTCTCTCGGATTGGGAGTCTGAGGGTGGAGACGCGACGATTGAAGGTAGCCTGGGCGAAGGAGAGAGCGGTGAAGATGGGGATTTTGAGGAGAGGGAAGAAGGGGGATTTGTGGAACCACCTGAGGATGCTAAACTATTTGTTGGCAACTTGCCTTATGATGTTGATAGTCAGAAATTGGCAATGCTTTTTGAGCAGGCTGGAACGGTGGAAATTGCTGAGGTAATTTATAATAGAGAGACTGATCAAAGTCGTGGGTTCGGATTTGTAACCATGAGTACGGTTGAAGAAGCCGATAAAGCTGTTGAGAAGTTCAACCGCTACGGTTTAGATGGGAGACTGTTGACTGTTAACAAGGCTGCTCCAAGAGGATCACGCCTTGAACGCCCACCTCGTACCTTTGAACCTGCATTGAGAGTCTTTGTTGGGAACTTGCCATGGGATGTTGACAATGCTCGCCTGGAGCAAATTTTCAGTGAACATGGTAAGGTTGTGAATGCTCGAATTGTGTATGACAGAGAAACTGGTCGATCGCGTGGTTTTGGCTTTGTCACAATGACCAGCGAGACTGAAATGAATGATGCCATTGCTGCTCTTGATGGTCAGAATTTGGAGGGGAGGACAATCAGAGTGAATGTTGCCGAGGAAAGACCCAGGCGCAGCTCCTTTTGA 1008 0.4633 MSITIIPALKTFSMAESCLLSLPSICFCKTKYPHFSTVSKSLKLQASCSNSSLFIPSLSLSRKTHYSSIVTFVTQTSDWAQQGEDNTLAVEEEEAELDESTWENQEEDGAEARLSDWESEGGDATIEGSLGEGESGEDGDFEEREEGGFVEPPEDAKLFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEADKAVEKFNRYGLDGRLLTVNKAAPRGSRLERPPRTFEPALRVFVGNLPWDVDNARLEQIFSEHGKVVNARIVYDRETGRSRGFGFVTMTSETEMNDAIAALDGQNLEGRTIRVNVAEERPRRSSF 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g02201 335 FunFam 31 kDa ribonucleoprotein, chloroplastic 240 334 - -
Bach2g02201 335 Gene3D - 239 334 IPR012677 -
Bach2g02201 335 Gene3D - 83 238 IPR012677 -
Bach2g02201 335 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 250 328 IPR000504 GO:0003723
Bach2g02201 335 SUPERFAMILY RNA-binding domain, RBD 243 333 IPR035979 GO:0003676
Bach2g02201 335 MobiDBLite consensus disorder prediction 106 120 - -
Bach2g02201 335 MobiDBLite consensus disorder prediction 133 149 - -
Bach2g02201 335 SMART rrm1_1 157 230 IPR000504 GO:0003723
Bach2g02201 335 SMART rrm1_1 251 324 IPR000504 GO:0003723
Bach2g02201 335 PANTHER OS02G0815200 PROTEIN 35 331 - -
Bach2g02201 335 MobiDBLite consensus disorder prediction 90 155 - -
Bach2g02201 335 SUPERFAMILY RNA-binding domain, RBD 152 244 IPR035979 GO:0003676
Bach2g02201 335 CDD RRM2_NsCP33_like 251 326 - -
Bach2g02201 335 FunFam 31 kDa ribonucleoprotein, chloroplastic 74 239 - -
Bach2g02201 335 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 156 234 IPR000504 GO:0003723
Bach2g02201 335 MobiDBLite consensus disorder prediction 90 105 - -
Bach2g02201 335 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 158 227 IPR000504 GO:0003723
Bach2g02201 335 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 252 322 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g02201 Bach-Chr2 28887107 28889318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g02201 124 332 Eukaryotic Initiation Factors Gene Family AT3G16380 31.963 1.38e-21 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g02201 - - qsa:O6P43_030799 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00259 5 1809879 1811817 Bach2g02201 2 28887107 28889318 BWGD
Bach5g00259 5 1809879 1811817 Bach2g02201 2 28887107 28889318 ECH
Bach2g02201 2 28887107 28889318 Bach2g02201 2 28887107 28889318 ECH