Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g02197 ATGGAGATGGAGCGCGTGTTTGAATTTCCTCATACTCACATGGATCGGCGCCCAAGAAAGAGAGTGCGTTTGGGATGGGACATCCCTGAAGCCCCTAAGGCTCAGGTAGGATTATTTTGTGGACAAGAGGTTGGAAATATTTCAAGCTATGCACCTTCAAGGGGGGCCTCGGAACATACCTCTAGTTCTCTGTATGTTAAGGGAGTTGCTCGAAACGGTTCTCCCCCATGGCGAGATGATGACAAAGATGGGCATTACATGTTTGCGCTTGGAGAAAATTTAACTTCTCGCTATAAGATCCACAGCAAAATGGGTGAAGGGACTTTTGGTCAGGTCTTGGAATGTTGGGACAGAGAAAGGAAGGAAATGGTTGCTGTAAAAATTGTCCGTGGGATAAAGAAATATCGTGAGGCAGCAATGATAGAAATTGAGGTGCTGCAACAGCTTGGGAAACATGATAAAGGTGGCAATCGTTGTGTGCAAATGCGGAACTGGTTTGACTATCGTAATCATATCTGTATTGTTTTTGAGAAGCTTGGACCAAGCTTATATGATTTTCTTCGGAAAAACAGTTACCGCTCATTTCCCATTGATCTTGTCCGCAAGATTGGCAGACAACTATTGGAATGTGTAGCATTCATGCAGGATTTGCACATGATCCACACCGACTTGAAGCCTGAAAACATACTTCTGGTGTCACCAGAGTATGTTAAGGCTCCTGACTACAAGAGTTCATCTAGATCACCAAGTTACAAGAGAGTCCCAAAATCAAGTGCAATCAAAGTTATTGATTTTGGCAGTACAACCTATGAGAGAGATGATCAGAATTACATTGTTTCAACACGTCATTATCGGGCACCTGAAGTTATCCTTGGACTTGGATGGAGTTATCCATGCGATATATGGAGTGTAGGTTGCATCTTGGCGGAGTTGTGCACGGGTGAAGCGTTGTTTCAGACTCATGAGAATTTGGAGCACCTTGCCATGATGGAGAGAGTGCTTGGCCCACTACCTCAGCACATGTTGAAGAAAGTAGACCGACACGCTGAGAAGTATGTGAGAAGGGGTAGGTTGGACTGGCCGGAGGGTGCAACCTCGAGGGAGAGCATTAAAGCTGTAATGAAGCTTCATCGTCTGCCGAATCTGATAATGCAGCATGTGGATCATTCAGCCGGTGATCTCATACATGTGTTGCAGGGATTGCTCAAGTACGACCCTTCGGAAAGGTTAACAGCCAGGGAAGCTCTTAGATATCCCTTCTTTGCGAGAGATCACCTTAGGAGATGATCCGATTCCGCCATTTTTTTGGATGACTTTAAATTAGCAATGGGCATGGGCTTTGATTTTGACTTAGGAATCAGCGGTGCGAAGTTGTTGCCTTTGCCCATTGGTAGGAGAAGCTCTCCATCCTCGTGAGCACAATAGCCTCCCCCATAAACCCACGACCTCGATTTGTCAATAATCCGTACCTTCCCGTTTCCATTGATTTCTCTCTTTTCGAATGTAATTCACTGACCCAAAC 1522 0.4527 MEMERVFEFPHTHMDRRPRKRVRLGWDIPEAPKAQVGLFCGQEVGNISSYAPSRGASEHTSSSLYVKGVARNGSPPWRDDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAVKIVRGIKKYREAAMIEIEVLQQLGKHDKGGNRCVQMRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRKIGRQLLECVAFMQDLHMIHTDLKPENILLVSPEYVKAPDYKSSSRSPSYKRVPKSSAIKVIDFGSTTYERDDQNYIVSTRHYRAPEVILGLGWSYPCDIWSVGCILAELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKKVDRHAEKYVRRGRLDWPEGATSRESIKAVMKLHRLPNLIMQHVDHSAGDLIHVLQGLLKYDPSERLTAREALRYPFFARDHLRR 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g02197 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Bach2g02197 428 ProSiteProfiles Protein kinase domain profile. 98 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach2g02197 428 CDD PKc_CLK 85 421 - -
Bach2g02197 428 SMART serkin_6 98 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach2g02197 428 SUPERFAMILY Protein kinase-like (PK-like) 85 424 IPR011009 -
Bach2g02197 428 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 1 424 - -
Bach2g02197 428 Gene3D Transferase(Phosphotransferase) domain 1 152 421 - -
Bach2g02197 428 FunFam Serine/threonine-protein kinase AFC2 85 178 - -
Bach2g02197 428 FunFam Serine/threonine-protein kinase AFC2 174 421 - -
Bach2g02197 428 Pfam Protein kinase domain 98 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach2g02197 428 Gene3D Phosphorylase Kinase; domain 1 85 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g02197 Bach-Chr2 28867483 28871136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g02197 103 421 Core Cell Cycle Gene Families AT1G76540 26.426 1.28e-25 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Bach2g02197 Pkinase 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g02197 K08287 - gmx:100804452 811.601