Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bach2g02189 | ATGGCAATTTCATCTGCAGCTGTTTCGTCAAAGCTCATATACCCACATGCTTCTTCATCCCTATCTTCCTCCTCTCCCTGTCCCGCTTCTGTTTGTGTATCTTGCTCCTCCTCCTCCACCACCACCACCACCACCACCACCAAGCACAAACTAACAATACCCACAAGCCACCTCTCCTCATCCTTCATTAACCCTTCCACAATTCTCCACCTTTCACGCTCTACTTCCACCAGCACCATTCGCCAACGCTCTTTCACAGTCCGAGCTGCTCGTGGTAAGTTTGAGAGGAAGAAGCCCCATGTAAATATCGGCACAATCGGCCATGTCGACCACGGCAAGACTACTCTAACTGCTGCTCTTACCATGGCCTTGGCGGCATTGGGCAACAGTGCCCCCAAGAAATACGACGAAATTGACGCTGCCCCTGAAGAGCGAGCTCGTGGAATTACCATTAACACCGCCACTGTTGAGTATGAGACTGAGAATCGCCATTATGCCCATGTCGACTGCCCCGGCCACGCCGATTATGTCAAGAACATGATTACCGGTGCTGCCCAGATGGACGGCGCAATTCTTGTTGTTTCTGGTGCTGACGGACCAATGCCTCAGACTAAGGAGCATATACTTTTGGCCAAGCAAGTCGGTGTGCCCAATATGGTTGTGTTTCTCAACAAACAAGACCAGGTTGATGACGAGGAACTTCTCCAGCTTGTCGAATTGGAGGTTCGTGAGTTGCTTTCTTCTTATGAATTCCCTGGTGATGATGTCCCCATTGTTTCTGGTTCTGCTCTGTTAGCTTTGGAAGCATTGATGGCTAATCCTGCCATTAAACGTGGTGATGACCAGTGGGTAGATAAGATTTATGAACTTATGGATTCTGTGGATAGTTATATTCCAATTCCCCAGCGTCAAACTGATCTTCCATTTTTACTTGCCGTGGAAGATGTGTTCTCAATAACTGGTCGTGGAACTGTGGCCACTGGCCGTGTTGAGAGAGGTACAGTTAAAGTTGGAGAAACCGTAGATATTGTTGGTTTGAGAGAAACTAGAAATACTACGGTGACTGGGGTAGAAATGTTTCAGAAGATTCTTGATGATGCTATGGCTGGGGATAATGTGGGATTGTTGCTCAGAGGTGTCCAGAAGGCTGATATACAGAGAGGGATGGTTTTGGCAAAGCCAGGCACCATTACCCCACACACCAAGTTTAATGCAATTGTATACGTGCTAAAGAAGGAAGAAGGGGGCAGGCATTCACCATTTTTTGCTGGTTACAGGCCACAATTTTACATGAGGACTACAGATGTGACTGGAAGAGTGGCCTCAATTATGAATGACAAAGATGAGGAATCCAAGATGGTCATGCCAGGAGACCGTGTTAAGATGGTTGTTGAACTTATTGTCCCTGTAGCTTGTGAGCAAGGAATGAGGTTTGCTATTAGAGAAGGAGGCAAGACTGTTGGAGCTGGTGTTATCCAATCAATTATTGAGTAA | 1494 | 0.4705 | MAISSAAVSSKLIYPHASSSLSSSSPCPASVCVSCSSSSTTTTTTTTKHKLTIPTSHLSSSFINPSTILHLSRSTSTSTIRQRSFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALAALGNSAPKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLSSYEFPGDDVPIVSGSALLALEALMANPAIKRGDDQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTVKVGETVDIVGLRETRNTTVTGVEMFQKILDDAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFNAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVASIMNDKDEESKMVMPGDRVKMVVELIVPVACEQGMRFAIREGGKTVGAGVIQSIIE | 497 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bach2g02189 | 497 | CDD | EFTU_III | 398 | 492 | - | - | |
Bach2g02189 | 497 | NCBIfam | small GTP-binding protein domain | 101 | 233 | IPR005225 | GO:0005525 | |
Bach2g02189 | 497 | SUPERFAMILY | Translation proteins | 303 | 399 | IPR009000 | - | |
Bach2g02189 | 497 | Gene3D | Translation factors | 304 | 432 | - | - | |
Bach2g02189 | 497 | Pfam | Elongation factor Tu domain 2 | 323 | 391 | IPR004161 | GO:0005525 | |
Bach2g02189 | 497 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 96 | 324 | IPR027417 | - | |
Bach2g02189 | 497 | Gene3D | - | 90 | 301 | IPR027417 | - | |
Bach2g02189 | 497 | FunFam | Elongation factor Tu | 304 | 432 | - | - | |
Bach2g02189 | 497 | CDD | EF_Tu | 99 | 301 | IPR041709 | - | |
Bach2g02189 | 497 | Pfam | Elongation factor Tu GTP binding domain | 98 | 299 | IPR000795 | GO:0003924|GO:0005525 | |
Bach2g02189 | 497 | Hamap | Elongation factor Tu [tuf]. | 89 | 497 | IPR004541 | GO:0003746|GO:0005525|GO:0006414 | |
Bach2g02189 | 497 | NCBIfam | elongation factor Tu | 90 | 497 | IPR004541 | GO:0003746|GO:0005525|GO:0006414 | |
Bach2g02189 | 497 | Pfam | Elongation factor Tu C-terminal domain | 396 | 495 | IPR004160 | - | |
Bach2g02189 | 497 | PRINTS | GTP-binding elongation factor signature | 182 | 193 | IPR000795 | GO:0003924|GO:0005525 | |
Bach2g02189 | 497 | PRINTS | GTP-binding elongation factor signature | 219 | 228 | IPR000795 | GO:0003924|GO:0005525 | |
Bach2g02189 | 497 | PRINTS | GTP-binding elongation factor signature | 146 | 154 | IPR000795 | GO:0003924|GO:0005525 | |
Bach2g02189 | 497 | PRINTS | GTP-binding elongation factor signature | 102 | 115 | IPR000795 | GO:0003924|GO:0005525 | |
Bach2g02189 | 497 | PRINTS | GTP-binding elongation factor signature | 166 | 176 | IPR000795 | GO:0003924|GO:0005525 | |
Bach2g02189 | 497 | SUPERFAMILY | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 396 | 496 | IPR009001 | - | |
Bach2g02189 | 497 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 139 | 154 | IPR031157 | - | |
Bach2g02189 | 497 | PANTHER | ELONGATION FACTOR TU-RELATED | 52 | 496 | - | - | |
Bach2g02189 | 497 | FunFam | Elongation factor Tu | 436 | 496 | - | - | |
Bach2g02189 | 497 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 98 | 302 | IPR000795 | GO:0003924|GO:0005525 | |
Bach2g02189 | 497 | Gene3D | Translation factors | 436 | 496 | - | - | |
Bach2g02189 | 497 | FunFam | Elongation factor Tu | 89 | 301 | - | - | |
Bach2g02189 | 497 | CDD | EFTU_II | 309 | 395 | IPR033720 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bach2g02189 | Bach-Chr2 | 28828672 | 28830165 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bach2g02189 | 96 | 495 | Eukaryotic Initiation Factors Gene Family | AT5G60390 | 29.663 | 1.11e-44 | 161 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bach2g02189 | K02358 | - | qsa:O6P43_022648 | 800.816 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bach5g00273 | 5 | 1892236 | 1893705 | Bach2g02189 | 2 | 28828672 | 28830165 | BWGD | |
Bach2g02189 | 2 | 28828672 | 28830165 | Bach2g02189 | 2 | 28828672 | 28830165 | ECH |