Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g02189 ATGGCAATTTCATCTGCAGCTGTTTCGTCAAAGCTCATATACCCACATGCTTCTTCATCCCTATCTTCCTCCTCTCCCTGTCCCGCTTCTGTTTGTGTATCTTGCTCCTCCTCCTCCACCACCACCACCACCACCACCACCAAGCACAAACTAACAATACCCACAAGCCACCTCTCCTCATCCTTCATTAACCCTTCCACAATTCTCCACCTTTCACGCTCTACTTCCACCAGCACCATTCGCCAACGCTCTTTCACAGTCCGAGCTGCTCGTGGTAAGTTTGAGAGGAAGAAGCCCCATGTAAATATCGGCACAATCGGCCATGTCGACCACGGCAAGACTACTCTAACTGCTGCTCTTACCATGGCCTTGGCGGCATTGGGCAACAGTGCCCCCAAGAAATACGACGAAATTGACGCTGCCCCTGAAGAGCGAGCTCGTGGAATTACCATTAACACCGCCACTGTTGAGTATGAGACTGAGAATCGCCATTATGCCCATGTCGACTGCCCCGGCCACGCCGATTATGTCAAGAACATGATTACCGGTGCTGCCCAGATGGACGGCGCAATTCTTGTTGTTTCTGGTGCTGACGGACCAATGCCTCAGACTAAGGAGCATATACTTTTGGCCAAGCAAGTCGGTGTGCCCAATATGGTTGTGTTTCTCAACAAACAAGACCAGGTTGATGACGAGGAACTTCTCCAGCTTGTCGAATTGGAGGTTCGTGAGTTGCTTTCTTCTTATGAATTCCCTGGTGATGATGTCCCCATTGTTTCTGGTTCTGCTCTGTTAGCTTTGGAAGCATTGATGGCTAATCCTGCCATTAAACGTGGTGATGACCAGTGGGTAGATAAGATTTATGAACTTATGGATTCTGTGGATAGTTATATTCCAATTCCCCAGCGTCAAACTGATCTTCCATTTTTACTTGCCGTGGAAGATGTGTTCTCAATAACTGGTCGTGGAACTGTGGCCACTGGCCGTGTTGAGAGAGGTACAGTTAAAGTTGGAGAAACCGTAGATATTGTTGGTTTGAGAGAAACTAGAAATACTACGGTGACTGGGGTAGAAATGTTTCAGAAGATTCTTGATGATGCTATGGCTGGGGATAATGTGGGATTGTTGCTCAGAGGTGTCCAGAAGGCTGATATACAGAGAGGGATGGTTTTGGCAAAGCCAGGCACCATTACCCCACACACCAAGTTTAATGCAATTGTATACGTGCTAAAGAAGGAAGAAGGGGGCAGGCATTCACCATTTTTTGCTGGTTACAGGCCACAATTTTACATGAGGACTACAGATGTGACTGGAAGAGTGGCCTCAATTATGAATGACAAAGATGAGGAATCCAAGATGGTCATGCCAGGAGACCGTGTTAAGATGGTTGTTGAACTTATTGTCCCTGTAGCTTGTGAGCAAGGAATGAGGTTTGCTATTAGAGAAGGAGGCAAGACTGTTGGAGCTGGTGTTATCCAATCAATTATTGAGTAA 1494 0.4705 MAISSAAVSSKLIYPHASSSLSSSSPCPASVCVSCSSSSTTTTTTTTKHKLTIPTSHLSSSFINPSTILHLSRSTSTSTIRQRSFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALAALGNSAPKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLSSYEFPGDDVPIVSGSALLALEALMANPAIKRGDDQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTVKVGETVDIVGLRETRNTTVTGVEMFQKILDDAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFNAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVASIMNDKDEESKMVMPGDRVKMVVELIVPVACEQGMRFAIREGGKTVGAGVIQSIIE 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g02189 497 CDD EFTU_III 398 492 - -
Bach2g02189 497 NCBIfam small GTP-binding protein domain 101 233 IPR005225 GO:0005525
Bach2g02189 497 SUPERFAMILY Translation proteins 303 399 IPR009000 -
Bach2g02189 497 Gene3D Translation factors 304 432 - -
Bach2g02189 497 Pfam Elongation factor Tu domain 2 323 391 IPR004161 GO:0005525
Bach2g02189 497 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 324 IPR027417 -
Bach2g02189 497 Gene3D - 90 301 IPR027417 -
Bach2g02189 497 FunFam Elongation factor Tu 304 432 - -
Bach2g02189 497 CDD EF_Tu 99 301 IPR041709 -
Bach2g02189 497 Pfam Elongation factor Tu GTP binding domain 98 299 IPR000795 GO:0003924|GO:0005525
Bach2g02189 497 Hamap Elongation factor Tu [tuf]. 89 497 IPR004541 GO:0003746|GO:0005525|GO:0006414
Bach2g02189 497 NCBIfam elongation factor Tu 90 497 IPR004541 GO:0003746|GO:0005525|GO:0006414
Bach2g02189 497 Pfam Elongation factor Tu C-terminal domain 396 495 IPR004160 -
Bach2g02189 497 PRINTS GTP-binding elongation factor signature 182 193 IPR000795 GO:0003924|GO:0005525
Bach2g02189 497 PRINTS GTP-binding elongation factor signature 219 228 IPR000795 GO:0003924|GO:0005525
Bach2g02189 497 PRINTS GTP-binding elongation factor signature 146 154 IPR000795 GO:0003924|GO:0005525
Bach2g02189 497 PRINTS GTP-binding elongation factor signature 102 115 IPR000795 GO:0003924|GO:0005525
Bach2g02189 497 PRINTS GTP-binding elongation factor signature 166 176 IPR000795 GO:0003924|GO:0005525
Bach2g02189 497 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 396 496 IPR009001 -
Bach2g02189 497 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 139 154 IPR031157 -
Bach2g02189 497 PANTHER ELONGATION FACTOR TU-RELATED 52 496 - -
Bach2g02189 497 FunFam Elongation factor Tu 436 496 - -
Bach2g02189 497 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 98 302 IPR000795 GO:0003924|GO:0005525
Bach2g02189 497 Gene3D Translation factors 436 496 - -
Bach2g02189 497 FunFam Elongation factor Tu 89 301 - -
Bach2g02189 497 CDD EFTU_II 309 395 IPR033720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g02189 Bach-Chr2 28828672 28830165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g02189 96 495 Eukaryotic Initiation Factors Gene Family AT5G60390 29.663 1.11e-44 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g02189 K02358 - qsa:O6P43_022648 800.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00273 5 1892236 1893705 Bach2g02189 2 28828672 28830165 BWGD
Bach2g02189 2 28828672 28830165 Bach2g02189 2 28828672 28830165 ECH