Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g02176 CCGGAATTTCCAATTCTAATATGTTTCTCTCGCTAACCTGAATTCCTGAATCGCTATTCAAAATTCGGAGAGGAACTGCACAACGAAGAGCCGAAGGGAGCCTGGAGGGAACGATTGCGTTTTGAAATTGGCCTTTTTTCCTTTCGGAACCCTAAACAAATTTCTAGCGGGTTTTCTGGCAGATTTTGGCTGCAATAGCAGCAAATTTTCGAGCTACCAACCATCATGAACCCTTACGACAATAGATATGCCGACGCAACTTCTTATCGGGAGCGTCGGAGTGATCTAGTTGGATCTAGGCCACCGAGGGTGCCTTCAGTGGCTGGTGTCGCGAGCTCGAGCTACGGCCGTGGTGGCCCCGTTTCTTATGTTCCTCCTCCTGCTCCGGTTGGTTATGGCATGAGTGGAAGAGGAGCTGGAAGTGTTTTCGGATCGGCACCTGTTTCTACGAACTATAACGCGCTTCCGCCTTTTGTGCCCCCACCTGGGGAGTTTGATATTGGCCGTGGCGGTGGGAGCAGCCAAAGAGGCTTTAGCGCTGGTGGTGATTTTAGTGGTAGACTGGGCAATGGCCTTGTAAATGGTGGTGATAGAAAAGAAGATATGAGAAGTCTCGGTCCTGGAAGAGGTCGTGGCAGAGGTGATAGCGGCAGAACGTTTGGTGCAGGCCGGGGCGGTGGTAGAGGTGGGACCTCTGGGAGAGGAGGCTTCGGAGGTAGAAGTTCTGGTGGAAATGGGGGCTTTGGCAGTGGCCGTGGTGGTCGAGGAGGTAGACATGGTGGATCGTCCAAAGATGACTTGGATAACATTGCTCTTCCGAGGCAAGATTTCAGGAATTTGGTCCCTTTTGAGAAGAATTTTTACATTGAGAGCCCTTCCGTACGGGCAATGTCTGATCATGAAGTTATGCACTTCCGTTCCAGTAGAGAGATCACTGTGCAAGGGCATGATATTCCAAAACCAATTCGGATGTTTCATGAGGCAAACTTTCCGGATTACTGCCTTGAGGTGATTGCCAAATTGGGTTTTGTTGAGCCCACATCAATTCAGGCTCAGGGTTGGCCTATGGCTCTGAAGGGTAGAGATTTGATTGGCATTGCTGAGACTGGCTCGGGTAAAACTCTGGCATATCTACTTCCTGCATTGGTGCATGTCAGTGCACAACCTCGATTGGTACAAGGTGAAGGTCCCATTGTCTTAGTCCTAGCACCTACTAGAGAGTTAGCCGTTCAAATTCAAGAGGAAGCTGTCAAATTTGCATCAAGAGCAAATATTAGAAGCACTTGCATCTATGGTGGTGCACCAAAGGGGCCTCAAGTTCGTGATCTTAAAAGAGGTGTAGAGATTGTTATTGCTACACCAGGTCGTCTTATAGATATGTTGGAAGCTCAGCACACAAACTTGCAGAGAGTAACTTACCTTGTGTTGGATGAGGCTGATCGAATGTTGGACATGGGTTTTGAACCTCAAATAAGAAAAATTGTTGGCCAAATTCGGCCAGATAGACAGACACTGTACTGGAGTGCTACGTGGCCAAGAGAGGTTGAAACCCTGGCAAGGCAGTTTCTACGCAGCCCCTATAAGGTAATTATTGGATCAACAGATCTGAAAGCAAATCAATCTATAAATCAAGTTGTTGAAGTTGTGACAGAAGTGGAGAAATACAATAGATTGATTAGACTGCTCAAAGAAGTAATGGATGGGAGCCGAATCCTGATATTTATGGAAACCAAAAAGGGGTGTGACCATGTTACAAGACAACTTAGAATGGATGGATGGCCAGCACTATCCATTCATGGTGATAAAAACCAAGCTGAGAGAGATTGGGTCTTGGCTGAGTTTAAGAGTGGTAGAAGTCCAATAATGACTGCCACTGATGTTGCTGCACGGGGTCTTGGTAGGATCACTGTGTGTGGGAGTCTTAGAACTATCGTATTCAAAGAGGTCATGTTAAATGGATGCATGGAGCGCAGTTCCATTGGGTATGGCTGCAATGATGGTGTATTATTTCTAAGTCGGTTGACTCATACATGCTTAGTTGATAATTGGATATGGGAGGTGGCAGTGATGGTGAAGCTGCTCCTTATCCCTGCAAGGCTAAGGTGGGCACATATATGTGATGAATATGTAAAAGACATAAAGTGTGTGATCAATTATGATTTTCCATCATGCCTGGAAGATTATGTCCACCGAATTGGTCGAACTGGTCGTGCAGGCGCTAAAGGAACTGCCTACACTTTTTTCACGCATGCGAATGCCAAATTTGCTAGGGATCTGATCAAGATTTTGCAAGATGCTGGCCAGGTTGCGAGTCCTGCTCTGTCTGCCTTGGCACGTTCAGCTGGTTCTGGATCTATGGGAAACTTTCGCTCCAGAGGACGTGGAGGCTATAGCAATCGGGGTCAAATATCAGGTTCCAATGCTATTCCTATTGGTTCAAGGAAGCCTTGGTAGTCTGTCCATGCTACTGCTTAGCCCAATTTCTTCCATTTCTTAAAAAGAAAAAGAAATGATTTACTTATATTTATCTGGGGAGCTATACGGCATTTTGCCCTGATTAGGGTTTAAACAGCACATTAA 2580 0.4636 MNPYDNRYADATSYRERRSDLVGSRPPRVPSVAGVASSSYGRGGPVSYVPPPAPVGYGMSGRGAGSVFGSAPVSTNYNALPPFVPPPGEFDIGRGGGSSQRGFSAGGDFSGRLGNGLVNGGDRKEDMRSLGPGRGRGRGDSGRTFGAGRGGGRGGTSGRGGFGGRSSGGNGGFGSGRGGRGGRHGGSSKDDLDNIALPRQDFRNLVPFEKNFYIESPSVRAMSDHEVMHFRSSREITVQGHDIPKPIRMFHEANFPDYCLEVIAKLGFVEPTSIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEAVKFASRANIRSTCIYGGAPKGPQVRDLKRGVEIVIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVGQIRPDRQTLYWSATWPREVETLARQFLRSPYKVIIGSTDLKANQSINQVVEVVTEVEKYNRLIRLLKEVMDGSRILIFMETKKGCDHVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLGRITVCGSLRTIVFKEVMLNGCMERSSIGYGCNDGVLFLSRLTHTCLVDNWIWEVAVMVKLLLIPARLRWAHICDEYVKDIKCVINYDFPSCLEDYVHRIGRTGRAGAKGTAYTFFTHANAKFARDLIKILQDAGQVASPALSALARSAGSGSMGNFRSRGRGGYSNRGQISGSNAIPIGSRKPW 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g02176 742 SMART helicmild6 507 664 IPR001650 -
Bach2g02176 742 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 227 703 - -
Bach2g02176 742 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 482 703 IPR001650 -
Bach2g02176 742 MobiDBLite consensus disorder prediction 92 194 - -
Bach2g02176 742 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 279 454 IPR014001 -
Bach2g02176 742 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 466 691 IPR027417 -
Bach2g02176 742 Pfam Helicase conserved C-terminal domain 478 557 IPR001650 -
Bach2g02176 742 Pfam Helicase conserved C-terminal domain 635 664 IPR001650 -
Bach2g02176 742 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 231 456 IPR027417 -
Bach2g02176 742 Pfam DEAD/DEAH box helicase 272 443 IPR011545 GO:0003676|GO:0005524
Bach2g02176 742 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 248 276 IPR014014 GO:0003724
Bach2g02176 742 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 400 408 IPR000629 -
Bach2g02176 742 MobiDBLite consensus disorder prediction 705 742 - -
Bach2g02176 742 MobiDBLite consensus disorder prediction 1 45 - -
Bach2g02176 742 MobiDBLite consensus disorder prediction 119 133 - -
Bach2g02176 742 SMART ultradead3 267 470 IPR014001 -
Bach2g02176 742 MobiDBLite consensus disorder prediction 720 734 - -
Bach2g02176 742 CDD SF2_C_DEAD 467 673 - -
Bach2g02176 742 CDD DEADc_DDX5_DDX17 260 454 - -
Bach2g02176 742 Gene3D - 221 458 IPR027417 -
Bach2g02176 742 Gene3D - 459 706 IPR027417 -
Bach2g02176 742 FunFam probable ATP-dependent RNA helicase DDX17 210 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g02176 Bach-Chr2 28762192 28766288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g02176 627 684 Eukaryotic Initiation Factors Gene Family AT3G19760 46.552 3.70e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g02176 K12823 - qsa:O6P43_030832 787.719