Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g02172 ATGGGTCGCCATTCCTGCTGTTTAAAGCAAAAACTGAGAAAAGGTTTATGGTCTCCTGAAGAAGACGAGAAGCTATTCAATTACATAACCAGATTTGGTGTTGGGTGTTGGAGTTCAGTTCCCAAACTAGCTGGATTGCAAAGATGTGGAAAGAGTTGCAGATTAAGATGGATAAATTATTTAAGGCCTGATTTAAAGAGAGGCATGTTCTCTCAACAGGAGGAGGATCTCATAATCAGTCTTCATGAAGTTCTTGGCAACAGGTGGGCTCAAATTGCAGCACAATTACCAGGAAGAACAGATAACGAGATCAAAAACTTGTGGAATTCATGTCTAAAGAAGAAGCTGTTGAAGCTAGGGATTGATCCAACAACCCACAAGCCTCTGAGTGAAGCTCAAATAAAAGAGGAGAAGAAAAACATGGAGACACCATCTATGCAAATACCCTTTTCTCAAGGACTTCCAGCTACAACGACCTTAGCCTCCTCACAGGGTTCAGCAGTTCTATTAAGTGATTCCAATTTTTACAATGGTGGGCTAAAGGAAGCTTCAAGAGAAGTTTTCATGAGCAAGCCAGCCTTGGACCCATTGTCCTACTTTGAATTCCAAATCGGTGTCACGCAATCCAGTACTTATAATTCAAGTTTGAGTCATTATCTCTCAGGTATTAAACCATTTGATCAGAACCATTTGGGAACAAATCCAAGCTATGGGTTCTCTTCAATGCCAAGTTTAACCAATTCTGATCACGGGAACATGTCGGTGACACAGTTTTCAGATAACAATTCAGCTTCCAAAATCAGTTCTTTGTTCATGACCGAGGTGAAAGATAGCTCAAGCAATGGCTCAAATATAAGCACTTATCCAGTAGCGGGGTGTCAGATAAACGATATGATGGAAAATGCAGGCTTCTCATGGGAAGGCGAGAACAAGATGGATTCTTTGTTTCAGTTTCATGTCAATGCCATAAAATCTGAGGAAATCAAGACAAGTTCATGGCAACAAGGGCAGCTTCAGACTCACAGTTCAATAGATTTCAATAGCTATCCGTTAACGTCACTGTCAGAGGATCTAACGGGAGCGAATTTTGATGTATTCCAACAAATATGA 1110 0.4072 MGRHSCCLKQKLRKGLWSPEEDEKLFNYITRFGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGMFSQQEEDLIISLHEVLGNRWAQIAAQLPGRTDNEIKNLWNSCLKKKLLKLGIDPTTHKPLSEAQIKEEKKNMETPSMQIPFSQGLPATTTLASSQGSAVLLSDSNFYNGGLKEASREVFMSKPALDPLSYFEFQIGVTQSSTYNSSLSHYLSGIKPFDQNHLGTNPSYGFSSMPSLTNSDHGNMSVTQFSDNNSASKISSLFMTEVKDSSSNGSNISTYPVAGCQINDMMENAGFSWEGENKMDSLFQFHVNAIKSEEIKTSSWQQGQLQTHSSIDFNSYPLTSLSEDLTGANFDVFQQI 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g02172 369 CDD SANT 70 109 IPR001005 -
Bach2g02172 369 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Bach2g02172 369 CDD SANT 17 61 IPR001005 -
Bach2g02172 369 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bach2g02172 369 SMART sant 66 114 IPR001005 -
Bach2g02172 369 SMART sant 13 63 IPR001005 -
Bach2g02172 369 Gene3D - 69 145 - -
Bach2g02172 369 FunFam MYB transcription factor 11 67 - -
Bach2g02172 369 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bach2g02172 369 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Bach2g02172 369 PANTHER MYB DOMAIN PROTEIN 55 1 309 - -
Bach2g02172 369 FunFam Transcription factor MYB86 69 137 - -
Bach2g02172 369 Gene3D - 11 67 - -
Bach2g02172 369 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Bach2g02172 369 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bach2g02172 369 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g02172 Bach-Chr2 28743089 28744441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g02172 1 133 MYB Transcription Factor Family AT1G57560 82.707 7.71e-82 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach2g02172 Myb_DNA-binding 2e-13 CL0123