Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g02161 ATGGCGGATCTCGGCTCACCGGTGACTGAAAAGGGTCCGCCCTCTTCTGACCCGAAAAGTAATAAGAAGGATTATTCCACTGCAATATTAGAACGCAAGAAGTCTCCTAACCGTCTTATTGTTGATGAGGCTATCAATGATGATAATTCTGTCGTCACCTTGCACCCTGCTACAATGGAGAAGCTTCAGTTTTTCCGGGGTGACACTGTTCTACTAAAGGGAAAGAAGCGAAGGGACACAGTTTGCGTTGTTTTAGCTGATGAAGATTGTGAACAACCGAAAATCAGGATGAATAAAGTTGTTCGGGCTAATCTTAGAGTACGACTTGGCGATGTTGTAGCTGTACATCAATGTCCTGATGTGAAGTATGGAAAGCGGGTACACATCCTTCCAATTGATGATACTATTGAGGGTGTAACTGGCAACTTGTTCGATGCATATCTAAAGCCATACTTTCTGGAGTCTTACCGGCCTGTGAGGAAAGGTGACCTGTTCCTTGTGAGGGGTGGGATGCGTAGCGTTGAATTCAAAGTAATAGAGACAGACCCTGGGGAATACTGTGTTGTGGCACCAGATACTGAAATCTTCTGTGATGGGGAACCCATCAAACGTGAGGATGAAGAGAGATTAAACGAAGTAGGCTATGATGATGTAGGTGGTGTCAGGAAGCAAATGGCTCAAATCCGTGAGCTAGTAGAGCTTCCTCTTAGACACCCGCAACTTTTCAAATCAATTGGTGTTAAGCCCCCAAAAGGAATCCTTCTTTATGGGCCACCTGGTTCTGGGAAAACTCTGATTGCTAGAGCAGTAGCTAATGAGACAGGTGCATTCTTCTTTTTGATTAATGGGCCAGAAATAATGTCAAAGTTGGCTGGTGAGAGTGAAAGCAATCTGAGAAAGGCATTTGAGGAAGCTGAAAAGAATTCCCCATCAATCATTTTTATTGATGAATTAGATTCAATTGCTCCAAAGAGAGAAAAAACTCATGGTGAAGTGGAGAGGCGTATTGTCTCTCAACTTTTGACTCTAATGGATGGCCTCAAGTCACGATCTCATGTTATTGTTATTGGAGCCACCAATAGGCCCAATAGCATTGATCCTGCTCTGAGGAGGTTTGGCAGATTTGATCGAGAGATTGACATTGGTGTACCAGATGAAGTTGGAAGATTGGAGGTTCTTAGAATTCATACAAAGAATATGAAACTTTCAGATGACGTGGATCTTGAAAGAGTTGCTAGGGATACCCACGGTTATGTTGGCTCAGATCTTGCTGCTCTTTGCACTGAGGCTGCACTACAGTGTATACGGGAGAAAATGGATGTGATTGACTTAGAGGACGAAACAATTGATGCCGAGGTGTTGAATTCCATGGCTGTGACCAATGAACACTTCCAAACTGCTTTGAGTGCATCAAATCCATCTGCCTTGCGTGAAACAGTTGTGGAGGTTCCAAATGTTTCTTGGGATGATATCGGGGGCCTAGAGAATGTCAAAAGAGAGCTTCAGGAGACTGTTCAATACCCAGTGGAGCATCCTGAGAAGTTCGAGAAATTTGGCATGTCACCATCTAAAGGTGTTCTTTTTTATGGACCTCCTGGTTGTGGTAAAACTCTGCTTGCAAAAGCAATTGCTAGCGAATGCCAGGCCAACTTTATTAGCGTTAAAGGACCAGAGCTGCTGACAATGTGGTTCGGTGAAAGTGAGGCCAATGTGCGTGAGATATTTGACAAGGCCCGGCAATCAGCTCCATGTGTGCTTTTCTTTGACGAACTTGATTCTATCGCAACCCAGCGTGGCAGTTCTGTAGGAGATGCCGGGGGGGCTGCAGATAGGGTGCTGAACCAACTATTGACAGAAATGGATGGAATGACAGCTAAAAAAACAGTTTTCATCATTGGGGCAACAAACAGGCCAGACATAATAGACCCTGCATTGCTCAGGCCTGGACGCCTGGACCAGCTTATTTACATCCCATTGCCAGATGAAAGCTCACGTCTTCAAATCTTTAAAGCATGTTTGAGGAAATCACCAATCTCACAGGATGTTGACCTGGCAGCTCTTGCCCGTTTTACTCATGGATTTAGTGGCGCAGACATTACTGAAATTTGTCAACGAGCCTGCAAATATGCGATCAGAGAAGATATTGAGAAGGGTATTGAAAGGGAGAGGAGAAAGAGAGAGAACCCTGAAGCCATGGAAGAAGATGACATTGATGAGGTCCCTGAGATAAAGCCATCCCACTTTGAGGAGTCTATGAAATTTGCTCGCCGAAGTGTCAGTGACGCTGACATCAGGAAATACCAACTCTTTGCTCAGACCTTGCAACAGTCTCGTGGATTTGGTTCAGAGTTTCGGTTTCCAAATCGAACTGAGGATGCAGCAGCTGGAGCTTCTGACCCTTTCTCCTCTGCTACTGCAGGAGATGATGATGATCTATACAGTTAA 2445 0.447 MADLGSPVTEKGPPSSDPKSNKKDYSTAILERKKSPNRLIVDEAINDDNSVVTLHPATMEKLQFFRGDTVLLKGKKRRDTVCVVLADEDCEQPKIRMNKVVRANLRVRLGDVVAVHQCPDVKYGKRVHILPIDDTIEGVTGNLFDAYLKPYFLESYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCVVAPDTEIFCDGEPIKREDEERLNEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRSHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERVARDTHGYVGSDLAALCTEAALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFQTALSASNPSALRETVVEVPNVSWDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIASECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDESSRLQIFKACLRKSPISQDVDLAALARFTHGFSGADITEICQRACKYAIREDIEKGIERERRKRENPEAMEEDDIDEVPEIKPSHFEESMKFARRSVSDADIRKYQLFAQTLQQSRGFGSEFRFPNRTEDAAAGASDPFSSATAGDDDDLYS 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g02161 814 Pfam Cell division protein 48 (CDC48), N-terminal domain 38 119 IPR003338 -
Bach2g02161 814 Gene3D - 663 771 - -
Bach2g02161 814 SMART CDC48_N_2 38 121 IPR003338 -
Bach2g02161 814 CDD RecA-like_CDC48_r2-like 497 657 - -
Bach2g02161 814 Gene3D - 384 475 - -
Bach2g02161 814 NCBIfam CDC48 family AAA ATPase 39 775 IPR005938 GO:0016787
Bach2g02161 814 MobiDBLite consensus disorder prediction 781 814 - -
Bach2g02161 814 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 484 772 IPR027417 -
Bach2g02161 814 FunFam Cell division control 48 384 475 - -
Bach2g02161 814 Gene3D - 218 382 IPR027417 -
Bach2g02161 814 Pfam ATPase family associated with various cellular activities (AAA) 526 659 IPR003959 GO:0005524|GO:0016887
Bach2g02161 814 Pfam ATPase family associated with various cellular activities (AAA) 253 382 IPR003959 GO:0005524|GO:0016887
Bach2g02161 814 CDD RecA-like_CDC48_r1-like 217 382 - -
Bach2g02161 814 PANTHER AAA-FAMILY ATPASE 412 777 - -
Bach2g02161 814 MobiDBLite consensus disorder prediction 1 27 - -
Bach2g02161 814 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 212 474 IPR027417 -
Bach2g02161 814 Gene3D - 16 120 - -
Bach2g02161 814 FunFam Transitional endoplasmic reticulum ATPase 15 120 - -
Bach2g02161 814 SUPERFAMILY Cdc48 domain 2-like 120 212 IPR029067 -
Bach2g02161 814 Gene3D - 476 659 IPR027417 -
Bach2g02161 814 Pfam Cell division protein 48 (CDC48), domain 2 140 202 IPR004201 -
Bach2g02161 814 ProSitePatterns AAA-protein family signature. 353 371 IPR003960 GO:0005524|GO:0016887
Bach2g02161 814 FunFam Transitional endoplasmic reticulum ATPase 476 659 - -
Bach2g02161 814 Gene3D - 121 217 - -
Bach2g02161 814 Pfam AAA+ lid domain 405 447 IPR041569 -
Bach2g02161 814 Pfam AAA+ lid domain 681 721 IPR041569 -
Bach2g02161 814 SMART AAA_5 249 385 IPR003593 GO:0016887
Bach2g02161 814 SMART AAA_5 522 661 IPR003593 GO:0016887
Bach2g02161 814 ProSitePatterns AAA-protein family signature. 629 647 IPR003960 GO:0005524|GO:0016887
Bach2g02161 814 SUPERFAMILY ADC-like 34 118 IPR009010 -
Bach2g02161 814 FunFam Transitional endoplasmic reticulum ATPase 214 382 - -
Bach2g02161 814 SMART CDC48_2_2 138 204 IPR004201 -
Bach2g02161 814 FunFam Cell division control 48 121 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g02161 Bach-Chr2 28634743 28639045 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g02161 518 717 Calmodulin-binding Proteins AT3G56690 41.872 3.86e-40 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g02161 K13525 - gmx:100798680 1523.45