Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g02108 ATGCGCAGTATTCAGCAGAATAATGGCGGTATTTTGGTGTACCCATCTCCTCAATCTCCTTTATATTCATTCAAAACTCCTTATCATGGTATTAGTAATGTGAAAGAAGCAACACCGTCACCATCTGTTAGCAAAATCAGTCCACTTATTCTGTTGGTTATTATAGTACTAGCAGTTATCTTCTTCATTTATGGACTTATCCATTTAGTTCTCTGGTTTCTGATGAAAAGGCCATCCTCTTCGTCTCTTTACCAATCCAACAGATTCCCTGAAGCCACTCGCTCTCGTGCTCTTCAAAGGCAGCTTCAACAGCTCTTCCGGTTACATGACTCGGGTCTAGACCAAGCTATTCTAGACGCTCTGCCTGTTTTCTACTACGACGATGTATTGGGTTTGGAGGGACCATTAGATTGTGCTGTGTGTCTCTGTGAATTTTCTAAGGAGGACAAGCTGAGATTGTTACCCATATGCAGTCATGCTTTTCATATTCATTGCATAGACACATGGCTTCTTTCAAATTCTACATGCCCTCTATGTAGAGCGACTCTCTCCAGCTCTTGCTTTCCCATGGAAAATCCGAACTTTAATTTTGATGCTTCTTGGGTTTTGCCAAACAGATTCACGGGTGATGAAGAGAATAGGTGTTCAGACAATCAGAGACCAGTAACTGCAGAGGAAAATGTTAGTGAAAGAAGGGTGCTTGCTGTGAGACTAGGGAAGTTCAGAAATGTTGGAATGGTGGGTGGTAGAGAAAGAGAGATAAGAGGAGGGGAAGAGACCAGTAGCTGTAATTTGGATGCTAGAAGATGCTATTCCATGGGTTCATATCAGTATGTGATGGGTGATTCAAATCTGCAAGTGATCCTATCTCATGGCAGAAGCAGAGGTGGTGAAGAAAGTGATGTGAGGAGCAAATACCTCTTTGATATTGCAGAAGATGGGGATGCAGATGGAAAGAAAATAGGTGACAGGAGGAGCAGAGGTGATAGCTTCTCTGTTTCCAAAATCTGGCTCTGGTCCAAGAAAAGCAGATTTCATACTTCTTCAAATGCTGCTTTCCCTTAA 1065 0.4235 MRSIQQNNGGILVYPSPQSPLYSFKTPYHGISNVKEATPSPSVSKISPLILLVIIVLAVIFFIYGLIHLVLWFLMKRPSSSSLYQSNRFPEATRSRALQRQLQQLFRLHDSGLDQAILDALPVFYYDDVLGLEGPLDCAVCLCEFSKEDKLRLLPICSHAFHIHCIDTWLLSNSTCPLCRATLSSSCFPMENPNFNFDASWVLPNRFTGDEENRCSDNQRPVTAEENVSERRVLAVRLGKFRNVGMVGGREREIRGGEETSSCNLDARRCYSMGSYQYVMGDSNLQVILSHGRSRGGEESDVRSKYLFDIAEDGDADGKKIGDRRSRGDSFSVSKIWLWSKKSRFHTSSNAAFP 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g02108 354 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 113 187 IPR013083 -
Bach2g02108 354 SMART ring_2 138 179 IPR001841 -
Bach2g02108 354 CDD RING-H2_EL5-like 137 180 - -
Bach2g02108 354 Pfam Ring finger domain 137 180 IPR001841 -
Bach2g02108 354 ProSiteProfiles Zinc finger RING-type profile. 138 180 IPR001841 -
Bach2g02108 354 FunFam E3 ubiquitin-protein ligase ATL6 101 186 - -
Bach2g02108 354 SUPERFAMILY RING/U-box 117 186 - -
Bach2g02108 354 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 43 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g02108 Bach-Chr2 28280714 28281778 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g02108 44 344 C3H Transcription Factor Family AT2G18650 44.377 1.31e-61 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g02108 - - qsa:O6P43_022735 421.009