Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g02091 ATGGGTGGCAATGGCAAGCACAGGTGGAAAATATCTTTCCATCGTTCTTCATCTAACTCAAAGCTGGATTCGAAGTCACCTCCGAAAGAGTTTATATGCTCAATCTCTGGGAGTTTAATGTCGGACGCAGTTGTTGTCGCTTCGGGTCAGACCTTTGAACGAGTTGCTGTTCAAGTGTGCAAAGATTTGAACTTCACCCCGAAGCTGGAGGACGGGTCCAGACCCGATTTCTCTGCGATTATTTCCAATCACGCCCTTAAGACGACGATACTCCATTGGTGCGACCAATCGGGAATGGAGTACCCGTGTGCACCCGATTACAGCTCAGTGGAGAGGGTTGTCCGTGCAGCAATGGCGTCCGAGCCCGACATAAGAGTTTCGGAAAGAGAATTGCTCAAGGGCGTGGCTGATAATCCAGCGGTGATTTTTTCTCACGCTGCGACCGAGTTGGGTCCCCGGATCACCCACTTCAACTCGAGCTCGTCCGATGAATCGGTAATTGTTGGGGCTACTCCAGGAACCCCTCTGCCTTTAACGATTCGTCCCACCTGTTACTCTTCGTCGACGTCTTCCTCTGAAATCACGGAGACCGATATCCAAATCCCTAGTGGTCCAATTTCAGAAGAAGAGGAGAAATTGGTTGCCAAATTCAGGAGTGAAGAAGTGTTTGAGCAAGAAGAAGCCGTAATTTCACTGAGAAACTTGACGAAGAGTAGAGAGGATACGAGAGTCTCCCTTTGCTCCCCTCGATTGCTCTCTGCCTTGCGACCCTTGATCGTCTCCAGATACTCCGTTGTTCAAGTAAACGCCGTCGCTTCGTTGGTCAACCTTTCGCTGGAAAAATCCAATAAGGTGAAGATAGTAAGGTCAGGATTCATCCCCTTTCTGATTGATGTCCTGAGAGGGGGATTTTCTGAGTCGCAGGAACACGCTGCAGGTGCACTATTTAGCTTAGCCTTAGATGACGATAACAAAATGGCTATTGGTGTTCTTGGCGCATTCCAGCCACTCATGCACGCGTTGAGGTCCGAGTCAGAGAGGACTCGGCACGACTCGGCTCTCGCGTTGTACCATTTGACCTTAGTTCAAAGCAACCGGGTCAAACTAGTAAAACTCGGCGCTGTGCCCACGCTACTAACGATGGTGAAGTCGGGGAACTTGGCGAGCCGGGTTTTGCTAATTCTGTGTAATCTTGCGGTGTGTAACGAGGGTCGTACGTCGATGCTCGACGGTAATGCGGTGGAGTGCTTGGTGGGGTTACTGAGGATGAACGAGTTGGACTCGGAGGCGACTCGGGAGAACTGTGTGGCCGCATTGTATGCGCTTAGCCAAGGGAGTTTCAGGTTCAAAGGACTGGCAAAAGAGGCAAGGGCAGTGGAAGTGTTAAAGGAGACTGAAGAGAGAGGAACAGAGAGGGCCAGAGAGAAGGCCAAGAGAATATTACAGATGATGAGGGCAGCAGGAGAAGGAGAAGATGAAGACGGAATCGATCACGATGGGATTCTGGAATCTGGTGGGTTAAATCGAAATCGGTTTCGAGTTGGAGGTGGCAGAAACATGAATATCCCCAACACAACATTATTTTAG 1587 0.5003 MGGNGKHRWKISFHRSSSNSKLDSKSPPKEFICSISGSLMSDAVVVASGQTFERVAVQVCKDLNFTPKLEDGSRPDFSAIISNHALKTTILHWCDQSGMEYPCAPDYSSVERVVRAAMASEPDIRVSERELLKGVADNPAVIFSHAATELGPRITHFNSSSSDESVIVGATPGTPLPLTIRPTCYSSSTSSSEITETDIQIPSGPISEEEEKLVAKFRSEEVFEQEEAVISLRNLTKSREDTRVSLCSPRLLSALRPLIVSRYSVVQVNAVASLVNLSLEKSNKVKIVRSGFIPFLIDVLRGGFSESQEHAAGALFSLALDDDNKMAIGVLGAFQPLMHALRSESERTRHDSALALYHLTLVQSNRVKLVKLGAVPTLLTMVKSGNLASRVLLILCNLAVCNEGRTSMLDGNAVECLVGLLRMNELDSEATRENCVAALYALSQGSFRFKGLAKEARAVEVLKETEERGTERAREKAKRILQMMRAAGEGEDEDGIDHDGILESGGLNRNRFRVGGGRNMNIPNTTLF 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g02091 528 FunFam RING-type E3 ubiquitin transferase 208 484 - -
Bach2g02091 528 Gene3D - 207 486 IPR011989 -
Bach2g02091 528 Pfam Armadillo/beta-catenin-like repeat 321 360 IPR000225 GO:0005515
Bach2g02091 528 Pfam U-box domain 28 96 IPR003613 GO:0004842|GO:0016567
Bach2g02091 528 SUPERFAMILY ARM repeat 212 484 IPR016024 -
Bach2g02091 528 FunFam RING-type E3 ubiquitin transferase 9 101 - -
Bach2g02091 528 PANTHER U BOX DOMAIN-CONTAINING 22 485 - -
Bach2g02091 528 SMART arm_5 401 444 IPR000225 GO:0005515
Bach2g02091 528 SMART arm_5 321 361 IPR000225 GO:0005515
Bach2g02091 528 SMART arm_5 362 400 IPR000225 GO:0005515
Bach2g02091 528 SMART arm_5 280 320 IPR000225 GO:0005515
Bach2g02091 528 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 6 101 IPR013083 -
Bach2g02091 528 ProSiteProfiles U-box domain profile. 26 100 IPR003613 GO:0004842|GO:0016567
Bach2g02091 528 SUPERFAMILY RING/U-box 14 101 - -
Bach2g02091 528 SMART Ubox_2 30 93 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g02091 Bach-Chr2 28188652 28190238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g02091 1 528 U-box Gene Family AT5G65200 58.169 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g02091 - - aip:107643932 736.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g01020 1 22784923 22786787 Bach2g02091 2 28188652 28190238 ECH
Bach2g02091 2 28188652 28190238 Bach2g02091 2 28188652 28190238 ECH