Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g02085 ATGGCTTCCTCCAGTGCAATTCAAGTTTCCTCTGCCCGGCACTGCACCTATAACCGGAAGCAGAAATCTCTCGGCCTCCTATGCACTAATTTCTTGAGCTTGTATAATCGTGATGGCGTCCACTTGATTGGCCTTGATGAGGCGGCTGCACGGCTAGGGGTCGAGAGACGACGAATCTATGACATAGTTAATGTATTGGAGAGTGTCGGGGTGCTTGCAAGGAAAGCCAAGAATCAATATACTTGGAAAGGCTTTGGGGCTATTCCTGGGGCTCTGCAGGAGCTTAAGGTAATCTCAATTTTAATTTTATCGCTGAAAATTGTGTCCGAAGACGAGGATGACGAAGAAACATCGTCCAATCCGAGTACTGGAAGTCAGAATGACAAGTCCAATCCTAATTCTGGTCTTATCAAATCTTTGAAGAATGATAACCGAAGGGAAAAATCCCTGGCGCTTCTAACTCAAAATTTTGTCAAGCTCTTTCTCTGCTCTAATGTGGAGTTGATCTCCCTTGACGATGCTGCAAAGTTGTTGCTTGGGGATGCTCATAATACATCCATAATGAGAACAAAAGTCAGACGTCTGTATGACATTGCAAATGTGCTCTCTTCTATGAACCTTATTGATAAGACTCATACATCGGACACAAGAAAACCAGCATTTAGGTGGCTAGGTTTGACAGGAAAAGCAGAGAATGAATCTGCTCGCAATTCAAATCTTAACGAGTCTAGGAAAAGGGTGTTTGGTGATGATGTCACAAACATTAATTTTAAGAGGAATAAAGTGGACTTGTTCGTCAACGGGGACTTAAATCAGAAGCCTAAGATACAAAATAAGGTGGACAATGGTAGTTGGCTGGATCAGGCAGGTAAAAGCTGTTCAGCACTAGAATCAAAACAGACTTCAAGGAGTTATCAGTTTGGTCCTTTTGCTCCAGCCTATGTTCCCAAAGCGAGTGCCACTGAGAAGAATAATGTGAAGCAGGTCCATGATTGGGATAGTCTTGCCACTGCTTATCGTCCACAGTATCACAACCAAGCTTTGAGAGACCTCTTCTCCCACTATATGGAAGCATGGCAATCGTGGTACTGTGAAGTCGCTGGAAAGAGGCCAATACAAATTCTGTAA 1128 0.4353 MASSSAIQVSSARHCTYNRKQKSLGLLCTNFLSLYNRDGVHLIGLDEAAARLGVERRRIYDIVNVLESVGVLARKAKNQYTWKGFGAIPGALQELKVISILILSLKIVSEDEDDEETSSNPSTGSQNDKSNPNSGLIKSLKNDNRREKSLALLTQNFVKLFLCSNVELISLDDAAKLLLGDAHNTSIMRTKVRRLYDIANVLSSMNLIDKTHTSDTRKPAFRWLGLTGKAENESARNSNLNESRKRVFGDDVTNINFKRNKVDLFVNGDLNQKPKIQNKVDNGSWLDQAGKSCSALESKQTSRSYQFGPFAPAYVPKASATEKNNVKQVHDWDSLATAYRPQYHNQALRDLFSHYMEAWQSWYCEVAGKRPIQIL 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g02085 375 SMART E2F_TDP_2 145 225 IPR003316 GO:0005667|GO:0006355
Bach2g02085 375 SMART E2F_TDP_2 19 84 IPR003316 GO:0005667|GO:0006355
Bach2g02085 375 Gene3D - 14 87 IPR036388 -
Bach2g02085 375 Gene3D - 140 227 IPR036388 -
Bach2g02085 375 SUPERFAMILY "Winged helix" DNA-binding domain 18 82 IPR036390 -
Bach2g02085 375 FunFam E2F transcription factor 8 14 86 - -
Bach2g02085 375 MobiDBLite consensus disorder prediction 112 139 - -
Bach2g02085 375 Pfam E2F/DP family winged-helix DNA-binding domain 20 84 IPR003316 GO:0005667|GO:0006355
Bach2g02085 375 Pfam E2F/DP family winged-helix DNA-binding domain 147 225 IPR003316 GO:0005667|GO:0006355
Bach2g02085 375 SUPERFAMILY "Winged helix" DNA-binding domain 147 226 IPR036390 -
Bach2g02085 375 MobiDBLite consensus disorder prediction 119 139 - -
Bach2g02085 375 FunFam E2F transcription factor-like E2FE 140 227 - -
Bach2g02085 375 PANTHER TRANSCRIPTION FACTOR E2F 12 344 IPR015633 GO:0000978|GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g02085 Bach-Chr2 28139639 28142346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g02085 14 372 E2F-DP Transcription Factor Family AT3G48160 56.334 1.02e-130 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Bach2g02085 E2F_TDP 5.3e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g02085 K09391 - qsa:O6P43_030916 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00343 5 2400139 2402346 Bach2g02085 2 28139639 28142346 BWGD
Bach2g02085 2 28139639 28142346 Bach2g02085 2 28139639 28142346 ECH