Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g02045 ATGGATGCAAACAAGTGTAGGCTGCTATTCTTGTGTGTACTATGTTTTGTTATATTTCCAACACTTAGAGCCAACATAGGCCATTTTGACGAATACTGGAAGAAGCAATCTGAGGATGCCCAACAGGCTGCTCGCAAGGCTGTCCACTCCAATCCCCAGGCTGTAATAAAAGATTTCAGCAAGGCTGTGAATGGTGGCAACAATAACACGAGGAGACTTCTACAGAACAAGAACAAGGGTCCATGCTCTGCCACAAACCCAATAGACAGTTGCTGGAGATGTGATCCAAACTGGGCAAGAAACAGGAAGAAGCTTGTCAATTGTGTCCTTGGGTTTGGCAAAGGCACCACAGGAGGCAAAGATGGGAAGTTTTATGTGGTCACTGATCCATCTGACAATGACTTGGTGAACCCGAAACCGGGAACATTGCGCCACGCAGTGATCCAACCGGTGCCATTATGGATCACCTTTGCTCATAGCATGAAGATCAGACTAAGTGAAGAGCTTATGGTCACTTCTAATAAGACAATAGATGGTCGTGGTGCCAATGTTCATATCTGCGATGGTGCTCAAATTACGTTGCAGTTTGTGAGAAATGTAATCATTCACGGGCTGCACATCCATGATAACAAAAGGGGTAATGGTGGGATGATCAGAGACTCAGTGAGTCACTATGGATACCGCACGCAAAGTGATGGTGATGGAATCTCATTGTTTGGAGCCACTAATGTGTGGATAGATCATATTTCTATGTGGCATTGCTATGATGGTTTGATTGATGCGGTTATGTCATCCACAGCCATTACCATTTCCAACTGCCATTTTACTAAACACAACGAAGTAATGTTATTTGGTGCGAGTGATGGGTATTCTGGTGATAAAGTGATGCAGGTAACTTTGGCTTTCAACCATTTTGGGAAAGGATTGGTGCAGAGGATGCCAAGGTGCAGGTGGGGATTCTTTCATATTGTAAACAACGACTACACCCATTGGCTCATGTATGCAATTGGTGGTAGCAAAAATCCCACCATCATCAGCCAGGGTAACCGATTTGTTGCTCCTGCAGATAGAAATTGCAAAGAGGTGACAAAGAGGGATTATGCCACTCAAAGTGAGTGGAAGAAATGGAATTGGAGATCAGAGGGTGACTTATTGGCAAATGGAGCCTTCTTTGTTCAGTCTGGAAAAGCAGTTGCAATCCCAAAGAAAGAAATGACTGCAAGGCCTGGATCAGCTGTGGCCAGTCTCACTCGTTACGCAGGTTCTCTAAACTGTCTAGTCAACAAGGCATGCTGA 1296 0.4468 MDANKCRLLFLCVLCFVIFPTLRANIGHFDEYWKKQSEDAQQAARKAVHSNPQAVIKDFSKAVNGGNNNTRRLLQNKNKGPCSATNPIDSCWRCDPNWARNRKKLVNCVLGFGKGTTGGKDGKFYVVTDPSDNDLVNPKPGTLRHAVIQPVPLWITFAHSMKIRLSEELMVTSNKTIDGRGANVHICDGAQITLQFVRNVIIHGLHIHDNKRGNGGMIRDSVSHYGYRTQSDGDGISLFGATNVWIDHISMWHCYDGLIDAVMSSTAITISNCHFTKHNEVMLFGASDGYSGDKVMQVTLAFNHFGKGLVQRMPRCRWGFFHIVNNDYTHWLMYAIGGSKNPTIISQGNRFVAPADRNCKEVTKRDYATQSEWKKWNWRSEGDLLANGAFFVQSGKAVAIPKKEMTARPGSAVASLTRYAGSLNCLVNKAC 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g02045 431 SMART amb_all 160 357 IPR002022 -
Bach2g02045 431 PANTHER PECTATE LYASE 18-RELATED 41 428 IPR045032 GO:0030570
Bach2g02045 431 SUPERFAMILY Pectin lyase-like 86 421 IPR011050 -
Bach2g02045 431 Gene3D - 85 424 IPR012334 -
Bach2g02045 431 PRINTS Pollen allergen Amb family signature 132 157 IPR018082 -
Bach2g02045 431 PRINTS Pollen allergen Amb family signature 334 353 IPR018082 -
Bach2g02045 431 PRINTS Pollen allergen Amb family signature 168 184 IPR018082 -
Bach2g02045 431 PRINTS Pollen allergen Amb family signature 376 400 IPR018082 -
Bach2g02045 431 PRINTS Pollen allergen Amb family signature 232 253 IPR018082 -
Bach2g02045 431 PRINTS Pollen allergen Amb family signature 312 331 IPR018082 -
Bach2g02045 431 PRINTS Pollen allergen Amb family signature 108 125 IPR018082 -
Bach2g02045 431 Pfam Pectate lyase 168 351 IPR002022 -
Bach2g02045 431 Pfam Pectate lyase, N terminus 25 74 IPR007524 GO:0030570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g02045 Bach-Chr2 27894785 27896544 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g02045 10 431 Polysaccharide Lyase AT3G01270 55.032 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g02045 K01728 - gmx:100801864 639.417