Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01991 ATGGCGGGGGAATCGTCTTCGTCTTCGCCTGTCTTGTCCATGGATGGTCTCCACGATGTTGAGGACTACGTTTGGGCATATCAAGCAGAAGTTTCATTGCCATGGGACACATTTCATCACGTTTTTGAACTTGTGCAGAGTGGAAATGAGGCATTTCGAGAGAACCGAATGGAAGAGGCAATCAACTTTTATACCCGAGCAAATAACATCAAAACTGGTGATCCCATTATCCTCAGCAATCGAAGTGCAGCTTATGTTAGGATTAGCCAACTCTTGAAGAACAGATCTCCATCAGCTTCAGAATATAAACCTTTGAGTGGGCTTGATCCTACTACGCATGCAGAACTTGGTTTGAAGGATGCTGAGAAGCTTGTTGGCTTCCGAAGTAATTCAGTAAAATCATACCTTTTAAAGGCCAATGCACTTTTTTTGTTGGAGAAATATGAAAAGGCCCGGGATGTTATTCTTTCAGGCCTTCAAGTTGATCCATACAGTAATTCCCTTCGAGCTTCTCTTAAAAATTTGGAAAAAGCATCAGCTAGTTTGAGGGGGACCAGTAAACATGGACAAGCAGAGCGTACTGATGATTTTGATTGCACTCTTTGCCTGAAGTTACTGTATGAACCTGTTACAACACCTTGTGGACACTCTTTTTGCCGCTCCTGTCTATTTCAGTCAATGGATCGTGGTAACCGATGCCCATTGTGCCGGACAGTTCTTTTTATTAGTCCTAGAACGTGCTCCATCAGTGTGACATTGAACAACATTATACAAAAGAACTTTCCAGAGGAATATGCTGAAAGGAAGCAAGAGCATGAGAGTTTGACCAACTTTGGTGTAGATTTATTGCCACTTTTTGTCATGGATGTTGTCATCCCATGTCAAAAGTTTCCACTGCATATATTTGAACCTCGGTACAGACTTATGGTCAGAAGAATAATGGAAGGAAATCATCGCATGGGAATGGTGATAAATGACTCTACAACAGGTTTCTTAGCTGAGTTTGCATGTGAAGTGGAAATCACTGAGTGTGAGCCTCTTCCAGATGGACGTTTCTATATAGAGATTGAAAGTCGCCGGAGGTTTCGCATAATCAGATCTTGCGATCAGGATGGATATCGTGTTGCAGAGGTTGAATGGATACAGGATATTATACCATCAGAAGGGACCAGAGAGAGGGAAGATTTGCAGGAATTGACACATAATGCAGCAGAATATGCTCGATCATGGATAAGAAGGGCTAGGGAAGCTGCAAGACAAGATCATAGAAGACTTGAGAAACTCCTGAATGTTGAAGCGCTGATGCCCTCAACACGAGACCCTGAGCGTTTCAGTTTTTGGCTTGCTACGTTATCAAACCGGAGGCCTTCAGAAAGATTGGATCTTCTACGCATTAGAGATACCAAAGAGAGGATTACACGTGGCTTGATATATCTCCGAGCAGACGAACAACGCCGCCGGATTCAGTAA 1470 0.4306 MAGESSSSSPVLSMDGLHDVEDYVWAYQAEVSLPWDTFHHVFELVQSGNEAFRENRMEEAINFYTRANNIKTGDPIILSNRSAAYVRISQLLKNRSPSASEYKPLSGLDPTTHAELGLKDAEKLVGFRSNSVKSYLLKANALFLLEKYEKARDVILSGLQVDPYSNSLRASLKNLEKASASLRGTSKHGQAERTDDFDCTLCLKLLYEPVTTPCGHSFCRSCLFQSMDRGNRCPLCRTVLFISPRTCSISVTLNNIIQKNFPEEYAERKQEHESLTNFGVDLLPLFVMDVVIPCQKFPLHIFEPRYRLMVRRIMEGNHRMGMVINDSTTGFLAEFACEVEITECEPLPDGRFYIEIESRRRFRIIRSCDQDGYRVAEVEWIQDIIPSEGTREREDLQELTHNAAEYARSWIRRAREAARQDHRRLEKLLNVEALMPSTRDPERFSFWLATLSNRRPSERLDLLRIRDTKERITRGLIYLRADEQRRRIQ 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01991 489 Gene3D Tetratricopeptide repeat domain 39 178 IPR011990 GO:0005515
Bach2g01991 489 PANTHER RING FINGER PROTEIN 127 30 481 - -
Bach2g01991 489 SMART lon_5 282 481 IPR003111 -
Bach2g01991 489 Pfam Zinc finger, C3HC4 type (RING finger) 199 236 - -
Bach2g01991 489 Gene3D - 281 383 IPR046336 -
Bach2g01991 489 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 185 278 IPR013083 -
Bach2g01991 489 Pfam ATP-dependent protease La (LON) substrate-binding domain 283 479 IPR003111 -
Bach2g01991 489 SUPERFAMILY RING/U-box 194 261 - -
Bach2g01991 489 ProSiteProfiles Lon N-terminal domain profile. 280 481 IPR003111 -
Bach2g01991 489 ProSitePatterns Zinc finger RING-type signature. 214 223 IPR017907 -
Bach2g01991 489 SUPERFAMILY PUA domain-like 283 479 IPR015947 -
Bach2g01991 489 SMART ring_2 199 236 IPR001841 -
Bach2g01991 489 CDD RING-HC_LONFs_rpt2 196 240 - -
Bach2g01991 489 SUPERFAMILY TPR-like 43 176 IPR011990 GO:0005515
Bach2g01991 489 ProSiteProfiles Zinc finger RING-type profile. 199 237 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01991 Bach-Chr2 27556745 27562224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01991 175 243 C3H Transcription Factor Family AT4G27470 32.911 7.68e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01991 - - qsa:O6P43_001984 807.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach2g01991 2 27556745 27562224 Bach2g01991 2 27556745 27562224 ECH