Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bach2g01986 | ATGTCGGACGAGGAGCACCATTTTGAGTCTAAAGCTGATGCTGGAGCCTCCAAGACTTACCCTCAGCAGGCCGGCACCATTCGCAAGAATGGTTACTTAGTGATCAAGGGACGCCCCTGCAAGGTTGTTGAAGTTTCAACCTCCAAGACTGGTAAGCACGGTCATGCTAAGTGCCACTTTGTTGCAATTGATATTTTCAATGGCAAGAAGCTCGAAGATATTGTTCCCTCTTCTCACAACTGTGATGTTCCCCATGTGAATCGTACTGACTATCAGCTGATTGATATCTCTGAGGATGGATTTGTGAGTCTTCTGACTGAAAATGGCAACACTAAGGATGACCTTAGGCTTCCTACTGACGAAAATCTTCTTTCCCAGATAAAGGATGGATTTGAGGGCGGTAAGGACCTTGTTGTTTCTGTCATGTCTGCTATGGGGGAGGAGCAGATTTGTTCCCTGAAGGACATTGGGCCAAAGTAGTTGCCTTAATTATTAGGATTTGTTATTTCCATTTACTCCCAGATAATTTGTTAGCCCTTATAGCTCTGTCTTTTTCAAGACCGAACGGATATATTTTAATTCTTCGAACGGTGTTTATTGATGTGGTGGTGATATAAACTATATCTCACTTTCGT | 635 | 0.4315 | MSDEEHHFESKADAGASKTYPQQAGTIRKNGYLVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFEGGKDLVVSVMSAMGEEQICSLKDIGPK | 159 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bach2g01986 | 159 | PIRSF | Transl_init_eIF5A | 1 | 157 | IPR001884 | GO:0003723|GO:0003746|GO:0043022|GO:0045901 | |
Bach2g01986 | 159 | Gene3D | - | 1 | 85 | IPR014722 | - | |
Bach2g01986 | 159 | Pfam | Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold | 85 | 154 | IPR020189 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 | |
Bach2g01986 | 159 | SUPERFAMILY | Translation proteins SH3-like domain | 15 | 93 | IPR008991 | - | |
Bach2g01986 | 159 | CDD | S1_eIF5A | 86 | 156 | - | - | |
Bach2g01986 | 159 | Gene3D | - | 86 | 158 | IPR012340 | - | |
Bach2g01986 | 159 | SMART | eIF_5a_2 | 85 | 154 | IPR020189 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 | |
Bach2g01986 | 159 | PANTHER | TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER | 1 | 157 | IPR001884 | GO:0003723|GO:0003746|GO:0043022|GO:0045901 | |
Bach2g01986 | 159 | SUPERFAMILY | Nucleic acid-binding proteins | 86 | 156 | IPR012340 | - | |
Bach2g01986 | 159 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Bach2g01986 | 159 | FunFam | Eukaryotic translation initiation factor 5A | 86 | 158 | - | - | |
Bach2g01986 | 159 | FunFam | Eukaryotic translation initiation factor 5A | 1 | 85 | - | - | |
Bach2g01986 | 159 | ProSitePatterns | Eukaryotic initiation factor 5A hypusine signature. | 50 | 57 | IPR019769 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 | |
Bach2g01986 | 159 | NCBIfam | translation initiation factor IF-5A | 17 | 154 | IPR001884 | GO:0003723|GO:0003746|GO:0043022|GO:0045901 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bach2g01986 | Bach-Chr2 | 27515907 | 27517728 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bach2g01986 | 1 | 159 | Eukaryotic Initiation Factors Gene Family | AT1G13950 | 88.050 | 1.42e-102 | 289 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bach2g01986 | K03263 | - | aew:130794052 | 317.005 |