Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01973 ATGAATCATTCGTCTGTGCAAATGTACCCCCCACCCCCTTCTTCCTTCACCACTTTACCATCACTCTATTCTCAGCAATCTTACACTTCTTCAACCCCTGTGTTCTTAACTTTCCCTCAACCACAATTCCCTTCTACGCTCTCGGATCAGCCTCTTTATCCTCCCGGCACGGACCCATATGGAAATTATGCCTTATATTCTAGATGTGAAACCCTAACAAAAGATTATCAGGACCCAAATGCAGTTTCTCAGAATGGGATTGTCACACAAACTGAGCCCATCAGATATGGAACTGTTATCCAATCTTTACATGAGACTCCAGTAGCGTCTACAAGTTTGCATGCTGCGTGGAAAGACAACTCAACAACTCAACATTTTACTAACGATACTACAGTTTTATTGCCTAATCAAACCAAAGTCATCAAGTCAATGCGGTGTGAGGTTTGCAAAATTGATTGTAATAGCAAAGATGTTTTTGAAAAGCACATATCAGGAAAGAAACACAAAATGAATTTGCGGTCACAGACTAATCCTACCAGTACATTGTTATCAGGAACCTCTCATGCAAGTTTACAAAGTCAAATGAACAGTATCCATGGGCAAGTATTATCTGGTACTGTAGGTAAGGAGTTAGAGTCTAAGAAGCAGAAGGATTTGAGTGGTGGTGCAGCTGTTGATTCAATAAGGTTTTGCACGATATGCAACATCTCTTGCAACAGTCAAGATGTATTTAGCAAACATCTAGCTGGGAAAAAGCACGCTGCTAAGGTTGGCTTGAAATCTCATAATGTGGTTGGTACGTATCGTGCTCCATTTCAGCGCTATGGTATTGGTTATTCCCCAAAGAGAGTCAAGATTGCTCAATCTGTATGGTGTGAAGTTTGCAAGCTCAGTTGTAACAGCAAGGATATATATATTACACACTTAGCTGGGAAGAAACACCTGAAGAACCAGGAGAAACTATCAAAATCAGAAAATGATGCTGGCGATAGTACTACAGCAGCAAATGCTTTGCAACGTACAACTCCAATAATTGGGCCGCTGGAAAAGCCAGACAATGATAAACTTGAACGAATGATTTCACAAAAGTCACAGAAGGCAGTCAATTCTGATGCACCGGAAAAGGATCTAGAGACGAAGAAACGTAAACTTGTAGAAGGTGGAGCTGCAGCAAATGCTGTTCGATGGTGCAGTCTATGCAATGTGGTGTGCAACAACGAGACAGTCTTTAATTTTCACCTTGCTGGGAAGAAACACGCTGCTATGGTGAAAAAGCAGACACGGTCAATTGGAGCAACCACTGAATGA 1308 0.4151 MNHSSVQMYPPPPSSFTTLPSLYSQQSYTSSTPVFLTFPQPQFPSTLSDQPLYPPGTDPYGNYALYSRCETLTKDYQDPNAVSQNGIVTQTEPIRYGTVIQSLHETPVASTSLHAAWKDNSTTQHFTNDTTVLLPNQTKVIKSMRCEVCKIDCNSKDVFEKHISGKKHKMNLRSQTNPTSTLLSGTSHASLQSQMNSIHGQVLSGTVGKELESKKQKDLSGGAAVDSIRFCTICNISCNSQDVFSKHLAGKKHAAKVGLKSHNVVGTYRAPFQRYGIGYSPKRVKIAQSVWCEVCKLSCNSKDIYITHLAGKKHLKNQEKLSKSENDAGDSTTAANALQRTTPIIGPLEKPDNDKLERMISQKSQKAVNSDAPEKDLETKKRKLVEGGAAANAVRWCSLCNVVCNNETVFNFHLAGKKHAAMVKKQTRSIGATTE 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01973 435 SMART ZnF_U1_5 287 321 IPR003604 GO:0003676|GO:0008270
Bach2g01973 435 SMART ZnF_U1_5 392 426 IPR003604 GO:0003676|GO:0008270
Bach2g01973 435 SMART ZnF_U1_5 141 175 IPR003604 GO:0003676|GO:0008270
Bach2g01973 435 SMART ZnF_U1_5 226 260 IPR003604 GO:0003676|GO:0008270
Bach2g01973 435 SUPERFAMILY beta-beta-alpha zinc fingers 286 321 IPR036236 -
Bach2g01973 435 Gene3D Classic Zinc Finger 124 176 - -
Bach2g01973 435 Gene3D Classic Zinc Finger 370 427 - -
Bach2g01973 435 Gene3D Classic Zinc Finger 207 261 - -
Bach2g01973 435 Pfam Zinc-finger of C2H2 type 291 314 - -
Bach2g01973 435 Pfam Zinc-finger of C2H2 type 396 419 - -
Bach2g01973 435 Pfam Zinc-finger of C2H2 type 146 168 - -
Bach2g01973 435 Pfam Zinc-finger of C2H2 type 230 253 - -
Bach2g01973 435 SUPERFAMILY beta-beta-alpha zinc fingers 124 175 IPR036236 -
Bach2g01973 435 Gene3D Classic Zinc Finger 280 327 - -
Bach2g01973 435 PANTHER ZINC FINGER PROTEIN 385B-LIKE 138 261 - -
Bach2g01973 435 SUPERFAMILY beta-beta-alpha zinc fingers 220 257 IPR036236 -
Bach2g01973 435 SUPERFAMILY beta-beta-alpha zinc fingers 392 426 IPR036236 -
Bach2g01973 435 SMART c2h2final6 144 168 IPR013087 -
Bach2g01973 435 SMART c2h2final6 395 419 IPR013087 -
Bach2g01973 435 SMART c2h2final6 229 253 IPR013087 -
Bach2g01973 435 SMART c2h2final6 290 314 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01973 Bach-Chr2 27428083 27430387 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01973 220 433 C2H2 Transcription Factor Family AT5G61190 30.556 7.01e-19 87.8