Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01972 ATGGAAGAAAATCAAGAATCCAAACACGTATGCAAGTTCTGCAGCAAGAGTTTCCCCTGTGGAAGATCCTTGGGAGGTCACATGAGGTCTCATATCACAAATATTTCAGCTGAAACAGAGGAAAAGCAACTCACGAAGAAGCTTTCGTCTTTCAACAAGAGAGGAAGCAACACTACTAAGGACGGAGAAACAGGTTCGGAGGCAGGAACTAACACTGGGTATGATCTCAGAGAGAACCGTAAGAAGACTTGGAGAGTTACAGATCCAAGTGAAGACCCTTCACTATTGGACAAGTTCTGCAAAGAGTGTGGGAAAGGGTTTCACTCTTGGAAAGCTCTCTTTGGTCACATGAAATGCCACTCTGAGAAAGAACGAGTTTCTGACAGCTTGGAAGATCAAGATTCATGGACTAACGCTACCCAGAAGCAGGTCATGGATAGCCAATCTGACAATGAAGCGGCAGCACCGAAACGAAGAAGAAGATCGAAGAGAAGAACAAGGTACATGGCTGCTGCTGCTGCAACTTCGTCTTTGTCTTTTGCCAATCTTTCCTCTTCTGTTTCTGAGGTTGAGCAAGAGCAAGAAGAGGTTGCCAGGAGCTTGATGATGCTTAGCAGAGATATGGGTCTTTGGGGTGGTCGAAATTCTGTTGCTGAGTCATCTGACAACAACTCTGCCTACTTTGAAGCTCGATCTTCACTTCGAACTAATCTGGCTAGTAAAATTGAGGGCAAGAAGCCAATTTCCAATGCTTCTGAGATAACAAAATTGACCAAAGGAAGTGAAAAGTGGGAGATTGGTGAGTCAGAATCTGCAAATCTGAGCTCTATAGGGAATAAATCTCAACTTTTGGGCACTGAGTTTTCAAGGAAAAATGGGTCTAAGATGAACAAAGCCAAGGTTTCAATCGATGGTTTCATCAAGACTGAGAAAGCTATGAAGTCCAAGCCCGATTATCAGTCAGCATTGGAAGACTCTACAGATGAACTTGGGAAGCACATGGTTCATGAAACAGAGTTGGATTTATCGAAGTCGGGTACTACTAAAAAGTATACTTCAATCAAGAGAAAATTCTGTGATTCTGATTCAAAGTCAAGTTGCTTAAAAAACAAAGATTCAGAAGCAGAATTGAGCAGGAATTCTGATAAGAGAGGCAAATTCGAGTGTACTACTTGCAACAAGATCTTCCACTCCTACCAAGCTCTTGGAGGTCACAGAGCTAGTCATAGAAAATTCAAAAGCTGCTTTGCTTCAAAAAATGAGAACAGTGAAAATAGCACTGAGACTGATCTCTCCCCTGACCCAACAACAGAAAGCAAGCTCATGAAGAACAGTAACACTGACACTGAATATTTGGTTAAACATGAACTGGGTGCTTCTGGTTTTGATGAAGCAAACACGGTTACAGAGTCTAAGAAGAGCAAAGTGCATGAGTGCCCAATTTGTCTTAAGGTTTTTCCATCTGGGCAAGCGTTGGGTGGCCATAAGAGATCCCATGTAGCTAGTGGGTCTGAGAGTAGAAATTGTCAAACACTTGTGCTTCAGGAACCAGTTCCAGAAATTAGGGACTTACTCGATCTTAATCTTCCAGCTACTACAGAGGAAGAGTGCACTAGCCATGCTGGGACTTACAGAGCCTGGTGGGTAGGAGGCAACCACAAACAGGAGGCACTGGTAGACTTGATGTCTAACTAA 1695 0.4313 MEENQESKHVCKFCSKSFPCGRSLGGHMRSHITNISAETEEKQLTKKLSSFNKRGSNTTKDGETGSEAGTNTGYDLRENRKKTWRVTDPSEDPSLLDKFCKECGKGFHSWKALFGHMKCHSEKERVSDSLEDQDSWTNATQKQVMDSQSDNEAAAPKRRRRSKRRTRYMAAAAATSSLSFANLSSSVSEVEQEQEEVARSLMMLSRDMGLWGGRNSVAESSDNNSAYFEARSSLRTNLASKIEGKKPISNASEITKLTKGSEKWEIGESESANLSSIGNKSQLLGTEFSRKNGSKMNKAKVSIDGFIKTEKAMKSKPDYQSALEDSTDELGKHMVHETELDLSKSGTTKKYTSIKRKFCDSDSKSSCLKNKDSEAELSRNSDKRGKFECTTCNKIFHSYQALGGHRASHRKFKSCFASKNENSENSTETDLSPDPTTESKLMKNSNTDTEYLVKHELGASGFDEANTVTESKKSKVHECPICLKVFPSGQALGGHKRSHVASGSESRNCQTLVLQEPVPEIRDLLDLNLPATTEEECTSHAGTYRAWWVGGNHKQEALVDLMSN 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01972 564 SMART c2h2final6 9 31 IPR013087 -
Bach2g01972 564 SMART c2h2final6 387 409 IPR013087 -
Bach2g01972 564 SMART c2h2final6 98 120 IPR013087 -
Bach2g01972 564 SMART c2h2final6 477 499 IPR013087 -
Bach2g01972 564 MobiDBLite consensus disorder prediction 127 166 - -
Bach2g01972 564 ProSitePatterns Zinc finger C2H2 type domain signature. 479 499 IPR013087 -
Bach2g01972 564 ProSitePatterns Zinc finger C2H2 type domain signature. 11 31 IPR013087 -
Bach2g01972 564 MobiDBLite consensus disorder prediction 132 150 - -
Bach2g01972 564 ProSitePatterns Zinc finger C2H2 type domain signature. 100 120 IPR013087 -
Bach2g01972 564 MobiDBLite consensus disorder prediction 74 88 - -
Bach2g01972 564 MobiDBLite consensus disorder prediction 36 88 - -
Bach2g01972 564 ProSiteProfiles Zinc finger C2H2 type domain profile. 98 125 IPR013087 -
Bach2g01972 564 ProSiteProfiles Zinc finger C2H2 type domain profile. 477 504 IPR013087 -
Bach2g01972 564 MobiDBLite consensus disorder prediction 418 442 - -
Bach2g01972 564 MobiDBLite consensus disorder prediction 361 380 - -
Bach2g01972 564 SUPERFAMILY beta-beta-alpha zinc fingers 387 499 IPR036236 -
Bach2g01972 564 ProSitePatterns Zinc finger C2H2 type domain signature. 389 409 IPR013087 -
Bach2g01972 564 ProSiteProfiles Zinc finger C2H2 type domain profile. 9 31 IPR013087 -
Bach2g01972 564 Gene3D Classic Zinc Finger 1 69 - -
Bach2g01972 564 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 548 - -
Bach2g01972 564 MobiDBLite consensus disorder prediction 49 73 - -
Bach2g01972 564 ProSiteProfiles Zinc finger C2H2 type domain profile. 387 414 IPR013087 -
Bach2g01972 564 Gene3D Classic Zinc Finger 384 499 - -
Bach2g01972 564 SUPERFAMILY beta-beta-alpha zinc fingers 9 120 IPR036236 -
Bach2g01972 564 Pfam C2H2-type zinc finger 100 122 - -
Bach2g01972 564 Pfam C2H2-type zinc finger 9 31 - -
Bach2g01972 564 Pfam C2H2-type zinc finger 476 499 - -
Bach2g01972 564 Pfam C2H2-type zinc finger 387 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01972 Bach-Chr2 27423925 27425619 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01972 438 535 C2H2 Transcription Factor Family AT1G26610 48.485 1.10e-16 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach2g01972 zf-C2H2_6 2e-12 CL0361