Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01961 ATGTCTTGTTCTTCTTCAGCAGAGGAGGTGGATTCTTGGGAAGGAATGTTGGCTGGATTGTCTGAGATTGATGGGAAATTCAAAGTGACTGGTATGGCCATGGAGAGGTTGGCCAGAGGTTTAGCAGAGGTGAAGAGGACGGTGGACCACATGGCAGAGGATGTTGAACAAATGAAGGAAATGATGGAAGCCATTTGTAACAAGGTAAATACGGGTCCTTCAAACCTGGGCAAAGGACCAATGACGGGAGGATCGGGGGAAAGTCCAGCAGACGATTGGGCAATGTGGGATGATTACTGGAGGGCGGCTTCAAAAAGGGTGGAGCTAACAGAAATCAACCAAGCCATGGAGCTTGCTCGGGACGAAGAAAAAGACCTCCACGAGCCATGGAGCCATGGAGCTAACAGAAACCAAACCAAACCACGTCACTCGGGTGTCCTCGTATCATATGAGGAACATCTAAACCAAACCATACCAAAGTGTTTAAAGGGGGACGATCTTAACGGGGGACGATCACCAACACGGAGCTACCAGCCCAGGTATTTGGATTCTGATTTCTCAGTAATCTCAAGGAGGCGCAATCAGTCGTGGAGCGACGTAGACCTTCACGAGTACAGAGTTTACAAGTCTGAATCATTCTGTGACTTAGCCGGCAAAGTCGCCGCAAACGTGTCGACTCAGACGGACGAAAAGCGAAGGCGGAAGAGAGCCATCAGAGAAGAGACAGTAGCAATTGAAGAAACGCAATCTCAACGTCATAACCAGAGTACGGAGCAAGGAGATGGTGTGCGGGCCAAATGCATACCAAGAAAATCTAAGACTCTGGCAACAAATAGCGTAGGAGCTGGTATATTCGGGTTCTGGAGCTGCTGTGTCCGTTGCAAGCAGCTCGGAAGGACGGTGCCCAGAAAATCAACTTCGCGTGATTATACAAGGGGAAGCAGAGGATCCTGGGGCCAGATGGTCGACGGGGATTGGGTTCCTGAATGCATTGACAAGCTAGCACAGGCTGGAATTAAGCTATGGGTTTTGACCGGTGATATAATAGAGACAGCAATCAATATTGGATTTGCTTATAGTTTACTTAGACAAGGAATGAAGCAAGTTATAATTAGCTTAGACACTCCAGAAATTAAATCACTGGAGAAAGGAGAGGACAAGTCTGCTGCTGGAGCGGCAATTAAGGCAAGTGTTCTTCGTCAGATACAAGAGGGAAAGAAATCACTTAATACATCAGATGAAAATTCTGAGGTAGTTGCTCTGATCATTGATGGGAAGTCTCTCGCTTATGCACTACAAGATGATGTCAAGGACTTGTTTCTTGAACTTGCCATTGGCTGTGCATCTGTTATATGCTGTCGTTCATCTCCCAAACAGAAAGCACTTGTCACAAGGCTGGTTAAAACTAAAACTGTTAGTACAACCCTAGCAATTGGTGATGGAGCAAATGATGTTGGAATGCTCCAAGAAGCAGACATTGGAATTGGTATCAGTGGTGTTGAAGGAATGCAGGCGGTTATGTCAAGTGACATTGCAATTGCCCAGTTGCGGGTTTTAGAGCGCTTACTGCTTGTGCATGGGCATTGGTGCTACAGAAGGATCTCATCAATGATTTGCTATTTCTTTTACAAGAATATTGCCTTCGGCTTCACTCTCTTTTTCTTTAAGATGTATACATCATTCTCGGGGCAAGCAGCCTACAACGATTGGTTTCTCTCACTATACAACATATTCTTCTCCTCACTTCTTGTGATTGCCTTAGGAGTGTTTGATCAGGATGTTTCTGCTAAATTATTTCTCAAGTTCCCACTGTTATATCAAGAAGGTGTGCAAAATGTGTTATTCAGCTGGAAACGAATCCTTGGCTGGGCCTTCAATGCGGTATTGAGTTCAACCTTGATATTCTTCCTCTGCGTTAGAGCTCTGGAGCGTCAAGTATTCCGAAAAGGCGGAGAAGTTGTGGGGCTAGAAGAACCTATGCAGGATCGAACTACGAGAAGTTGGTTGGTCAAGCAATACCTAGGGTACTTTCCATCAATTCAATTATCAGCAACAGTGAGTCCAATAACCAGAACTGTTTTGAAGATTGATTTGGTTATAACACCAGACTTCATCTGGAAAGATCGTTTTCATGGTGCTGCTCAACGTTGGTGGATTCTGGTTGAGGACTCTGAGAATGATCACATTTACCACTCAGAGCTCTTCACTTTGACAAAGCGGATGGCTAGGGGTGAACCACACAAGCTGTCCTTCACTGTGCCAATATTTGAACCTCATCCTCCACAATACTACATTCATGCCGTTTCTGATTCTTGGTTGCATGCAGAGGCGTTCTACACTATATCTTTTCATAATTTAGCACTGCCTGAGGCTCATACTGCTCACACTGAACTCCTAGATTTAAAACCTCTCCCTGTTACTTCACTTGGAAACAGTGCTTATGAAGCATTGTATAGATTTTCACATTATAATCCTATACAAACACAGACTTTTCATATCTTGTGCCACACAGACAATAATGTTCTCTTAGGAGCTCCTACTGGAAGTGGAAAAACTATATCTGCTGAGCTTGCTATGCTTCGTCTCTTCAATACGCAGCCTGATATGAAGGTTATTTACATTGCACCTTTGAAGGCTATTGTTAGGGAAAGAATGAATGATTGGCAAAAGCGTCTTGTCTCTCAGCTTGGAAAAAAGATGGTTGAAATGACTGGAGATTATACCCCCGATTTGATGGCCCTCTTGTCTGCAAATATCATAATATCTACTCCTGAGAAGTGGGATGGTATCAGTCGGAATTGGCATAGTCGAAGCTACGTCACAAAGGTTGGACTTATGATATTGGATGAGATTCACTTACTGGGAGCTGACCGTGGGCCAATTCTTGAGGTTATTGTTTCTCGGATGAGATACATATCATCTCAAACAGAGCGTGCTGTGCGGTTTATAGGCCTTTCTACTGCTCTAGCTAATGCTGGTGATTTAGCTGATTGGTTGGGCGTTGAGGAAGTTGGGCTCTTCAATTTCAAGCCAAGTGTGAGACCTGTGCCTCTGGAAGTTCATATTCAGGGATATCCTGGAAAGTTTTACTGCCCTAGGATGAACAGTATGAATAAACCAGCATATGCTGCAATATGCACACATTCACCTACAAAACCAGTACTTATATTTGTCTCATCACGACGCCAGACAAGACTCACTGCATTGGACCTAATTCAGTTTGCTGCCTCAGATGAACTTCCACGGCAGTTCCTTAATATGTCAGAAGAAGCACTGCAGATGGTTCTGTCTCAAATCACGGACCAGAACCTGAGGCATACTTTACAGTTTGGCATTGGGCTACATCATGCTGGACTAAATGACAGAGATAGATCCCATGTTGAGGAACTATTTGCTAACAACAAGATTCAGATATTGGTTTGTACCAGCACATTGGCGTGGGGTGTGAATCTTCCAGCTCATCTAGTAATTATCAAGGGGACAGAATACTATGACGGAAAGGCCAAGAGATATGTTGATTTTCCAATAACAGATATCATGCAAATGATGGGTCGTGCAGGACGACCTCAGTATGATCAACATGGGAAAGCTGTCATTCTTGTTCATGAACCTAAAAAGAGCTTCTATAAAAAGTTCTTGTATGAGCCTTTTCCTGTTGAGAGTAGTCTGAGGGATCGACTGCATGATCACATCAATGCAGAAATTGTTTCTGGGACAATTTGCCATAAACAGGATGCAGTGCATTATCTTACATGGACTTACTTATTCCGTAGACTGATGGTTAATCCTGCTTACTATGGCTTGGAGACTGCAGAACCTGATATTCTAAGTTCATATTTGTCTAGCTTAGTACAGAACACATTTGAGGATCTGGAAGATAGTGGATGCATAAAGATGAATGATGAGATGGTGGAGCCCATGATGCTGGGTTCAATAGCATCTCAGTATTACCTTAGCTACTTGACTGCGTCAATGTTTGGTTCAAACATAGGCCCCAATACATCACTTGAAGTGTTTTTGCATATTTTATCAGCTGCTTCTGAATTTGATGAACTTCCTGTGCGTCATAATGAGGAAAAGTACAACGAATCACTGTCTGAGAAAGTTAGATGTCCTGTTGATAAGAATCGTCTAGATGATCCTCATGTGAAAGCAAATCTTCTATTTCAGGCTCATTTTTCTCAGTTGGAGTTACCAATCAGTGACTACATCACTGATTTGAAATCAGTGTTAGATCAGAGTATACGCATAATTCAGGCCATGATTGATATATGCGCAAACAGTGGTTGGCTTTCAAGCACAATTAGTTGCATGCATCTTCTTCAAATGGTTATGCAGGGTTTGTGGTTTGATAAAGACTCAGCCTTATGGATGTTGCCATGCATGAACTCCAATCTGATAAGTTCATTAAGTGGAAGTGGAATTTCCACTGTACAGCAACTACTAGATATCCCAAAAGCTGCATTGCAGACTGTAGCTGGAAATTTCCCTGCTTCTAGATTGTATCAGGATCTGCAGCATTTCCCTCACGTTAAAATGAAATTAAGGGTTCAGAGGAGGGACACTGATGGCGGGAAGTCCTGCATTTTGCATGTTCGATTGGAGAAGATCAATTCTAGACGACATTCTTCTAGAGCTTTTGTGCCTAAATTCCCTAAGATAAAAGACGAGCAATGGTGGTTGGTTCTTGGCAACACGTCTACATCTGAGCTATATGCTTTGAAGAGAGTTTCTCTTTCTGATCAGCTTGTTACCACGATGGAGTTGCCACAAACACCAACTACTATCCAGGGTATGAAGCTGATTTTAGTCTCTGATTGTTACATCGGTTTTGAACTAGAACAATCAATTGAAGGACTTTTGGGGGGTCAGCAAATAGAAGCAAGACTAAGAAAATAGGGTTTACAATCTGATATTTGTAATATTTATTCGGTGTGCAATTTT 4944 0.4294 MSCSSSAEEVDSWEGMLAGLSEIDGKFKVTGMAMERLARGLAEVKRTVDHMAEDVEQMKEMMEAICNKVNTGPSNLGKGPMTGGSGESPADDWAMWDDYWRAASKRVELTEINQAMELARDEEKDLHEPWSHGANRNQTKPRHSGVLVSYEEHLNQTIPKCLKGDDLNGGRSPTRSYQPRYLDSDFSVISRRRNQSWSDVDLHEYRVYKSESFCDLAGKVAANVSTQTDEKRRRKRAIREETVAIEETQSQRHNQSTEQGDGVRAKCIPRKSKTLATNSVGAGIFGFWSCCVRCKQLGRTVPRKSTSRDYTRGSRGSWGQMVDGDWVPECIDKLAQAGIKLWVLTGDIIETAINIGFAYSLLRQGMKQVIISLDTPEIKSLEKGEDKSAAGAAIKASVLRQIQEGKKSLNTSDENSEVVALIIDGKSLAYALQDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTVSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQLRVLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFKMYTSFSGQAAYNDWFLSLYNIFFSSLLVIALGVFDQDVSAKLFLKFPLLYQEGVQNVLFSWKRILGWAFNAVLSSTLIFFLCVRALERQVFRKGGEVVGLEEPMQDRTTRSWLVKQYLGYFPSIQLSATVSPITRTVLKIDLVITPDFIWKDRFHGAAQRWWILVEDSENDHIYHSELFTLTKRMARGEPHKLSFTVPIFEPHPPQYYIHAVSDSWLHAEAFYTISFHNLALPEAHTAHTELLDLKPLPVTSLGNSAYEALYRFSHYNPIQTQTFHILCHTDNNVLLGAPTGSGKTISAELAMLRLFNTQPDMKVIYIAPLKAIVRERMNDWQKRLVSQLGKKMVEMTGDYTPDLMALLSANIIISTPEKWDGISRNWHSRSYVTKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLGVEEVGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDELPRQFLNMSEEALQMVLSQITDQNLRHTLQFGIGLHHAGLNDRDRSHVEELFANNKIQILVCTSTLAWGVNLPAHLVIIKGTEYYDGKAKRYVDFPITDIMQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLRDRLHDHINAEIVSGTICHKQDAVHYLTWTYLFRRLMVNPAYYGLETAEPDILSSYLSSLVQNTFEDLEDSGCIKMNDEMVEPMMLGSIASQYYLSYLTASMFGSNIGPNTSLEVFLHILSAASEFDELPVRHNEEKYNESLSEKVRCPVDKNRLDDPHVKANLLFQAHFSQLELPISDYITDLKSVLDQSIRIIQAMIDICANSGWLSSTISCMHLLQMVMQGLWFDKDSALWMLPCMNSNLISSLSGSGISTVQQLLDIPKAALQTVAGNFPASRLYQDLQHFPHVKMKLRVQRRDTDGGKSCILHVRLEKINSRRHSSRAFVPKFPKIKDEQWWLVLGNTSTSELYALKRVSLSDQLVTTMELPQTPTTIQGMKLILVSDCYIGFELEQSIEGLLGGQQIEARLRK 1632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01961 1632 Gene3D - 324 517 IPR023214 -
Bach2g01961 1632 Pfam Sec63 Brl domain 1306 1617 IPR004179 -
Bach2g01961 1632 Pfam DEAD/DEAH box helicase 825 989 IPR011545 GO:0003676|GO:0005524
Bach2g01961 1632 NCBIfam phospholipid-translocating P-type ATPase 327 656 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Bach2g01961 1632 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1009 1218 IPR027417 -
Bach2g01961 1632 PANTHER DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED 794 1522 - -
Bach2g01961 1632 Gene3D - 1015 1219 IPR027417 -
Bach2g01961 1632 Gene3D - 1220 1313 IPR036388 -
Bach2g01961 1632 FunFam Phospholipid-transporting ATPase 322 518 - -
Bach2g01961 1632 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 832 1007 IPR014001 -
Bach2g01961 1632 CDD SF2_C_Ski2 1014 1202 - -
Bach2g01961 1632 Gene3D - 1314 1450 - -
Bach2g01961 1632 SUPERFAMILY Sec63 N-terminal domain-like 1339 1494 - -
Bach2g01961 1632 FunFam U5 small nuclear ribonucleoprotein helicase 1220 1313 - -
Bach2g01961 1632 Pfam Helicase conserved C-terminal domain 1095 1188 IPR001650 -
Bach2g01961 1632 SUPERFAMILY "Winged helix" DNA-binding domain 1218 1318 IPR036390 -
Bach2g01961 1632 CDD DEXHc_ASCC3_2 822 1010 - -
Bach2g01961 1632 FunFam Activating signal cointegrator 1 complex subunit 3 1313 1449 - -
Bach2g01961 1632 NCBIfam HAD-IC family P-type ATPase 444 561 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bach2g01961 1632 FunFam Activating signal cointegrator 1 complex subunit 3 1015 1219 - -
Bach2g01961 1632 Gene3D - 787 1014 IPR027417 -
Bach2g01961 1632 Coils Coil 41 61 - -
Bach2g01961 1632 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 709 1007 IPR027417 -
Bach2g01961 1632 FunFam DExH-box ATP-dependent RNA helicase DExH14 1509 1619 - -
Bach2g01961 1632 Gene3D C2 domain 1509 1619 IPR035892 -
Bach2g01961 1632 SMART ultradead3 819 1023 IPR014001 -
Bach2g01961 1632 SUPERFAMILY HAD-like 325 524 IPR036412 -
Bach2g01961 1632 SUPERFAMILY Calcium ATPase, transmembrane domain M 458 668 IPR023298 -
Bach2g01961 1632 Pfam Protein SOSEKI, plant 184 262 IPR010369 -
Bach2g01961 1632 SUPERFAMILY E set domains 1525 1617 IPR014756 -
Bach2g01961 1632 FunFam Activating signal cointegrator 1 complex subunit 787 1014 - -
Bach2g01961 1632 Gene3D C2 domain 677 786 IPR035892 -
Bach2g01961 1632 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1038 1247 IPR001650 -
Bach2g01961 1632 SMART helicmild6 1098 1190 IPR001650 -
Bach2g01961 1632 SMART Sec63_2 539 783 IPR004179 -
Bach2g01961 1632 SMART Sec63_2 1306 1619 IPR004179 -
Bach2g01961 1632 Pfam Phospholipid-translocating P-type ATPase C-terminal 506 655 IPR032630 -
Bach2g01961 1632 Pfam Sec63 Brl domain 649 782 IPR004179 -
Bach2g01961 1632 FunFam RNA helicase, activating signal cointegrator 1 677 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01961 Bach-Chr2 27332125 27345815 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01961 327 657 Primary Pumps ATPases AT3G25610 73.716 6.33e-156 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01961 K18663 - gmx:100811503 1751.1