Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01960 ATGTTGATTCAGATTCCTCGGCTGACAAACTCTCTGAGAGGACCTTTTGATATTGACCAGGCGTATCTTCAACGCAAAATCATTCTCCAAAACCAAAGACCTCGCAACTCTGCAAGTTCGCTAGATGAATCGGAGCTCGCACGGAAGATCGTTTATCGATGGGAAGAAGCTTCATCAGAAGTACGAGATGCCTATAAGCAGTTTATTGGAGCGGTGGTGGAGTTGATTGACAGAGAAACGCCTTCTGAGGAGTTCCAGGAGGTGGCAGTGACCATTAACCGTCTTTTCAGAGGTTTTATAGAGAATGATGACATTGATAGAATTATTTCTGACAAGAAGTTCGAATTGCAAAAACTTCTTGGTCATGCAGTGCCAGATGCTAAATTGAGGGAAGTTGCATCTCTAGCACAGAGGCTTTTTAATTTGCAGCCCAGCAATAATAGTGACGACTTCCATTTGGAAAGAAGCCTAGATGGTAGCGACAGGGATCTAGAATTTGGAGCCGATCTTGTTTTTCAAGCACCAGCTCGTTTCTTGGTTGATGTGTCTTTAGATGATGGGGATATTATAGATTATGAAAGCACTGCTGCTTCAGCATTTCATGAACAATATTACAGTCATTCAGAACCAACAGAATATTCTGCCATCAATGGGGCAAAGTTCAACTTGAGCTGGTTAAGAGATGAATGTGGTAAAATCGTTAAGAATAGTATCTCACAGCTATCTCGAGATGAGCTTGCAATGGCCATTTGTAGGGTTCTTGATTCAGAAAAGCCTGGGGAAGAGATGGCAGGAGATTTGTTGGACCTGGTTGGTGATAGCGCATTTGAAACTGTGCAAGACCTTGTATTGCATAGAAAGGAGATTGTTGATGCCATCCATCATGGCTTGTTGGTATTGAAGTCAGATAAAAATAATTCAAATGCTCAGCCACGTATGCCTAGTTACGGGACTCAGGTGACTGTTCTAACAGAGTCTGAAAGGCAAATTGACAAACTTCGACGCAAGGAGGAAAAACGAAACAAACGAGGCACAGAATATGCGGGTGATGGTGACTTGTCTGCAGCAGACTTTTCATCTCTACTTGAAGCAAGTGAGAGAAAAAATCTATTTGATGATATGATTGGTTCTGGGGATAGGACCCAGTCAGTAGCCGTTACTGCTCTCCCTCAAGGAACTGTTAGGAAGTATTTGAAGGGGTATGAGGAGGTCATTATACCCCCAACACCAACAGCACCGATGAAACCTGGGGAAAAGCTGATTGAGATTGGGGAGTTAGATGACTTTGCTCAAGCTGCTTTCCATGGCTACAAAACACTAAACCGTATCCAAAGCAGGATATTTCAAACTGTTTATGGCACTAATGAGAATATACTAGTGTGTGCTCCCACAGGGGCTGGCAAGACTAACATAGCTATGATTTCAGTTCTACATGAGATTGGACAGCACTTCAAGGATGGTTATTTGCACAAAAATGAATTTAAGATAGTTTATGTTGCTCCAATGAAGGCTTTGGCCGCCGAAGTGACATCAACATTCAGCCAACGTTTATCTCCTTTGAATATGACTGTCAGGGAGCTTACTGGAGATATGCAACTTTCTAAAAATGAACTTGAAGAAACTCAGATGATAGTGACAACACCTGAGAAATGGGATGTTATCACTCGCAAGAGTAGTGACATGTCACTCTCATTGCTGGTGAAGCTCTTAATTATTGATGAGGTGCATCTTCTCAATGATGATAGAGGTCCTGTAATAGAAGCTCTAGTTGCTAGGACCCTTCGACAGGTGGAGTCAACTCAGACAATGATACGCATTGTGGGCCTTTCTGCCACTCTTCCCAATTACCTAGAGGTTGCACAGTTTCTGAGAGTGAATCCAGACGCAGGACTTTTCTTCTTTGATTCTAGTTATCGTCCCGTGCCTCTTGCACAACAGTATGTTGGAATTAGTGAGCAGAACTTTGTAGCTCGTACTGAATTGTTGAATGAGATATGCTATAAGAAGGTTGTTGATTCTATTAAGCAAGGTCATCAAGCAATGGTATTTGTCCATTCACGGAAAGACACTGCAAAAACTGCTCAGAAACTGGTTGAGCTTGCACGAAAGTATGATGAGATGGAACTTTTTAGGAATAATACACATCCACAATACACCTTTATGAAGAAAGAAGTCATTAAATCCAGAAACAAAGATCTTGTTGAACTTTTTGAGCATGGGATTGGTGTTCATCATGCTGGGATGTTACGTGCTGATAGAGGACTAACAGAGCGACTTTTTTCTGATGGACTTCTGAAGGTTCTTGTTTGTACAGCAACTTTGGCATGGGGTGTTAATCTGCCTGCTCACACAGTTGTCATTAAGGGTACTCAATTATATGATCCTAAGGCTGGTGGGTGGCGTGATCTGGGTATGCTTGATGTTATGCAGATATTTGGGCGTGCTGGGAGACCTCAGTTTGACAAAAGTGGGGAAGGTATCATAATTACATCTCATGACAAGCTAGCATATTATCTCCGACTGCTGACAAGCCAACTCCCTATAGAAAGTCAGTTTATTAGCTCCTTGAAAGATAATTTAAATGCTGAGGTGGCATTGGGAACTGTAACTAATGTCAAGGAAGCTTGTGCATGGCTCGGCTATACATACCTTTTCATAAGGATGAGGATGAATCCATTGGCTTATGGTATTAACTGGGAGGAGGTTAGGGCAGATCCTTCTTTGAGTTTTAAGCAAAGATCTCTTGTGATTGATGCTGCACGAGCCCTTGATAAAGCAAAAATGATGCGGTTTGATGAGAAAAGTGGCAACTTTTACTGCACGGAGCTTGGCCGCATTGCTAGCCATTTTTACATTCAGTATTCTAGTGTTGAAACATACAATGAAATGCTGAGACGCTACATGAATGATACTGAGGTGATTAACATGGTTGCACATTCGTCTGAATTTGAGAACATTGTTGTCCGGGAAGAAGAACAAAATGAGCTAGAGATGTTGGTACGGACATCCTGCCCATTAGAAGTTAAGGGTGGTCCTTCCAACAAACATGGAAAAATTTCCGTTCTAATTCAGCTGTACATATCTCGAGGCTTCATGGATACTTTTTCATTGGTTTCTGATGCTGCATATATTAGTGCAAGCTTGGCTCGTATAATGCGGGCTTTATTTGAGATATGTTTGCGAAGAGGCTGGTGTCAGATGTCTTTGTTCATGTTAGAATATTGCAAAGCTGTGGATCGACAAATTTGGCCACACCAACATCCTCTAAGACAATTTGATAAGGACCTTTCTGCAGAAATATTGCGGAAGCTTGAAGAGCGTGGGGCTGACTTAGATCGCCTGCAGGAGATGGAAGAAAAAGACATTGGGGCATTAATTCGCTATGCCCCTGGTGGAAGGGCACACATATACACCATGTCTTGTTCTTCTTCAGCAGAGGAGGTGGATTCTTGGGAAGGAATGTTGGCTGGATTGTCTGAGATTGATGGGAAATTCAAAGTGACTGGTATGGCCATGGAGAGGTTGGCCAGAGGTTTAGCAGAGGTGAAGAGGACGGTGGACCACATGGCAGAGGATGTTGAACAAATGAAGGAAATGATGGAAGCCATTTGTAACAAGGTAAATACGGGTCCTTCAAACCTGGGCAAAGGACCAATGACGGGAGGATCGGGGGAAAGTCCAGCAGACGATTGGGCAATGTGGGATGATTACTGGAGGGCGGCTTCAAAAAGGGTGGAGCTAACAGAAATCAACCAAGCCATGGAGCTTGCTCGGGACGAAGAAAAAGACCTCCACGAGCCATGGAGCCATGGAGCTAACAGAAACCAAACCAAACCACGTCACTCGGGTGTCCTCGTATCATATGAGGAACATCTAAACCAAACCATACCAAAGTGTTTAAAGGGGGACGATCTTAACGGGGGACGATCACCAACACGGAGCTACCAGCCCAGGTATTTGGATTCTGATTTCTCAGTAATCTCAAGGAGGCGCAATCAGTCGTGGAGCGACGTAGACCTTCACGAGTACAGAGTTTACAAGTCTGAATCATTCTGTGACTTAGCCGGCAAAGTCGCCGCAAACGTGTCGACTCAGACGGACGAAAAGCGAAGGCGGAAGAGAGCCATCAGAGAAGAGACAGTAGCAATTGAAGAAACGCAATCTCAACGTCATAACCAGAGTACGGAGCAAGGAGATGGTGTGCGGGCCAAATGCATACCAAGAAAATCTAAGACTCTGGCAACAAATAGCGTAGGAGCTGGTATATTCGGGTTCTGGAGCTGCTGTGTCCGTTGCAAGCAGCTCGGAAGGACGGTGCCCAGAAAATCAACTTCGCGTGATTATACAAGGGGAAGCAGAGGATCCTGGGGCCAGATGGTCGACGGGGATTGGGTTCCTGAATGCATTGACAAGCTAGCACAGGCTGGAATTAAGCTATGGGTTTTGACCGGTGATATAATAGAGACAGCAATCAATATTGGATTTGCTTATAGTTTACTTAGACAAGGAATGAAGCAAGTTATAATTAGCTTAGACACTCCAGAAATTAAATCACTGGAGAAAGGAGAGGACAAGTCTGCTGCTGGAGCGGCAATTAAGGCAAGTGTTCTTCGTCAGATACAAGAGGGAAAGAAATCACTTAATACATCAGATGAAAATTCTGAGGTAGTTGCTCTGATCATTGATGGGAAGTCTCTCGCTTATGCACTACAAGATGATGTCAAGGACTTGTTTCTTGAACTTGCCATTGGCTGTGCATCTGTTATATGCTGTCGTTCATCTCCCAAACAGAAAGCACTTGTCACAAGGCTGGTTAAAACTAAAACTGTTAGTACAACCCTAGCAATTGGTGATGGAGCAAATGATGTTGGAATGCTCCAAGAAGCAGACATTGGAATTGGTATCAGTGGTGTTGAAGGAATGCAGGCGGTTATGTCAAGTGACATTGCAATTGCCCAGTTGCGGGTTTTAGAGCGCTTACTGCTTGTGCATGGGCATTGGTGCTACAGAAGGATCTCATCAATGATTTGCTATTTCTTTTACAAGAATATTGCCTTCGGCTTCACTCTCTTTTTCTTTAAGATGTATACATCATTCTCGGGGCAAGCAGCCTACAACGATTGGTTTCTCTCACTATACAACATATTCTTCTCCTCACTTCTTGTGATTGCCTTAGGAGTGTTTGATCAGGATGTTTCTGCTAAATTATTTCTCAAGTTCCCACTGTTATATCAAGAAGGTGTGCAAAATGTGTTATTCAGCTGGAAACGAATCCTTGGCTGGGCCTTCAATGCGGTATTGAGTTCAACCTTGATATTCTTCCTCTGCGTTAGAGCTCTGGAGCGTCAAGTATTCCGAAAAGGCGGAGAAGTTGTGGGGCTAGAAGAACCTATGCAGGATCGAACTACGAGAAGTTGGGTGATTTTCATATTTCTGACTTGTTTCAGACTTGAGGGCAAGTCTGTTGTTGAGGGGGGAGGAATTGTTAGGAACAAAACCACTATAGATGACCAGACAAGAGAAGATGAGGTGGCTGACATTTGA 5544 0.4349 MLIQIPRLTNSLRGPFDIDQAYLQRKIILQNQRPRNSASSLDESELARKIVYRWEEASSEVRDAYKQFIGAVVELIDRETPSEEFQEVAVTINRLFRGFIENDDIDRIISDKKFELQKLLGHAVPDAKLREVASLAQRLFNLQPSNNSDDFHLERSLDGSDRDLEFGADLVFQAPARFLVDVSLDDGDIIDYESTAASAFHEQYYSHSEPTEYSAINGAKFNLSWLRDECGKIVKNSISQLSRDELAMAICRVLDSEKPGEEMAGDLLDLVGDSAFETVQDLVLHRKEIVDAIHHGLLVLKSDKNNSNAQPRMPSYGTQVTVLTESERQIDKLRRKEEKRNKRGTEYAGDGDLSAADFSSLLEASERKNLFDDMIGSGDRTQSVAVTALPQGTVRKYLKGYEEVIIPPTPTAPMKPGEKLIEIGELDDFAQAAFHGYKTLNRIQSRIFQTVYGTNENILVCAPTGAGKTNIAMISVLHEIGQHFKDGYLHKNEFKIVYVAPMKALAAEVTSTFSQRLSPLNMTVRELTGDMQLSKNELEETQMIVTTPEKWDVITRKSSDMSLSLLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESTQTMIRIVGLSATLPNYLEVAQFLRVNPDAGLFFFDSSYRPVPLAQQYVGISEQNFVARTELLNEICYKKVVDSIKQGHQAMVFVHSRKDTAKTAQKLVELARKYDEMELFRNNTHPQYTFMKKEVIKSRNKDLVELFEHGIGVHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRMNPLAYGINWEEVRADPSLSFKQRSLVIDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETYNEMLRRYMNDTEVINMVAHSSEFENIVVREEEQNELEMLVRTSCPLEVKGGPSNKHGKISVLIQLYISRGFMDTFSLVSDAAYISASLARIMRALFEICLRRGWCQMSLFMLEYCKAVDRQIWPHQHPLRQFDKDLSAEILRKLEERGADLDRLQEMEEKDIGALIRYAPGGRAHIYTMSCSSSAEEVDSWEGMLAGLSEIDGKFKVTGMAMERLARGLAEVKRTVDHMAEDVEQMKEMMEAICNKVNTGPSNLGKGPMTGGSGESPADDWAMWDDYWRAASKRVELTEINQAMELARDEEKDLHEPWSHGANRNQTKPRHSGVLVSYEEHLNQTIPKCLKGDDLNGGRSPTRSYQPRYLDSDFSVISRRRNQSWSDVDLHEYRVYKSESFCDLAGKVAANVSTQTDEKRRRKRAIREETVAIEETQSQRHNQSTEQGDGVRAKCIPRKSKTLATNSVGAGIFGFWSCCVRCKQLGRTVPRKSTSRDYTRGSRGSWGQMVDGDWVPECIDKLAQAGIKLWVLTGDIIETAINIGFAYSLLRQGMKQVIISLDTPEIKSLEKGEDKSAAGAAIKASVLRQIQEGKKSLNTSDENSEVVALIIDGKSLAYALQDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTVSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQLRVLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFKMYTSFSGQAAYNDWFLSLYNIFFSSLLVIALGVFDQDVSAKLFLKFPLLYQEGVQNVLFSWKRILGWAFNAVLSSTLIFFLCVRALERQVFRKGGEVVGLEEPMQDRTTRSWVIFIFLTCFRLEGKSVVEGGGIVRNKTTIDDQTREDEVADI 1847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01960 1847 Coils Coil 1179 1199 - -
Bach2g01960 1847 CDD DEXHc_ASCC3_1 439 635 - -
Bach2g01960 1847 FunFam U5 small nuclear ribonucleoprotein helicase 941 1083 - -
Bach2g01960 1847 SUPERFAMILY Calcium ATPase, transmembrane domain M 1665 1807 IPR023298 -
Bach2g01960 1847 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 634 847 IPR027417 -
Bach2g01960 1847 FunFam Phospholipid-transporting ATPase 1460 1656 - -
Bach2g01960 1847 FunFam U5 small nuclear ribonucleoprotein helicase 1084 1138 - -
Bach2g01960 1847 Pfam Helicase conserved C-terminal domain 672 817 IPR001650 -
Bach2g01960 1847 FunFam U5 small nuclear ribonucleoprotein helicase 640 842 - -
Bach2g01960 1847 FunFam RNA helicase, activating signal cointegrator 1 428 639 - -
Bach2g01960 1847 Gene3D - 849 940 IPR036388 -
Bach2g01960 1847 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 385 624 IPR027417 -
Bach2g01960 1847 FunFam U5 small nuclear ribonucleoprotein helicase 849 940 - -
Bach2g01960 1847 SMART Sec63_2 940 1362 IPR004179 -
Bach2g01960 1847 NCBIfam phospholipid-translocating P-type ATPase 1465 1796 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Bach2g01960 1847 SMART ultradead3 436 647 IPR014001 -
Bach2g01960 1847 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 666 864 IPR001650 -
Bach2g01960 1847 CDD SF2_C_Ski2 639 830 - -
Bach2g01960 1847 NCBIfam HAD-IC family P-type ATPase 1582 1699 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bach2g01960 1847 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 449 631 IPR014001 -
Bach2g01960 1847 Pfam Phospholipid-translocating P-type ATPase C-terminal 1644 1795 IPR032630 -
Bach2g01960 1847 Gene3D - 1085 1137 - -
Bach2g01960 1847 SUPERFAMILY "Winged helix" DNA-binding domain 847 952 IPR036390 -
Bach2g01960 1847 Coils Coil 323 343 - -
Bach2g01960 1847 SUPERFAMILY Sec63 N-terminal domain-like 968 1136 - -
Bach2g01960 1847 Pfam Protein SOSEKI, plant 1322 1400 IPR010369 -
Bach2g01960 1847 Gene3D - 428 639 IPR027417 -
Bach2g01960 1847 Gene3D - 640 842 IPR027417 -
Bach2g01960 1847 Gene3D - 1462 1655 IPR023214 -
Bach2g01960 1847 Pfam DEAD/DEAH box helicase 442 615 IPR011545 GO:0003676|GO:0005524
Bach2g01960 1847 SUPERFAMILY HAD-like 1463 1662 IPR036412 -
Bach2g01960 1847 Gene3D - 941 1083 - -
Bach2g01960 1847 PANTHER DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED 276 1165 - -
Bach2g01960 1847 Pfam Sec63 Brl domain 940 1108 IPR004179 -
Bach2g01960 1847 SMART helicmild6 731 819 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01960 Bach-Chr2 27318903 27331626 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01960 1465 1795 Primary Pumps ATPases AT3G25610 73.716 2.96e-155 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01960 K18663 - gmx:100811503 1941.01