Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01952 ATGGCTTTCTTTGGTAGAGTGGGGAATCTACTAAGGCAAGCAATAAACAAGCAGATCAGTTCACAATTAAGTTCATCGCCATCTGTTTTTCAATCTATAAGATGTATGTCGTCCGCGCCAAGCTCAAAGCTATTTGTAGGAGGCCTGTCGTATAGTACAGATGAGAGAAGCTTGCAGGAAGCTTTTTCTAAATATGGCACAGTCGTTGACGCAAGGGTAATTATGGATCGTGAAACTGGTAGATCCAGAGGATTTGGCTTTGTTACTTTCACTTCAGTTGAGGAGGCATCGAGTGCCATTCAGGCCTTGGATCAGAAGGACCTTCATAGCCGCATGATTAGGGTAAACTATGCCAACGACAGGACTCGTGGCTTCAGCAGTGGTGGTTATGGTAATGCTTCTAATGCTTCCTATGGTTCTGGCGCTGGCTATGGAGGTGCTTATGGTAATGCTCCCTATGGGGGTTCTGGAAGTGGTAGTGGCTATGGTGATAGTGGTGCATATGGTGGCAATGCTGCTGGAGGGTATGGTGGTGGTGAATATGATCCGGGAAGCTATGGGTCAGGTGGCAATTACAGGAGTGGAGGTTCTGACAATAACTATGCCACTGATAGTTTGGGAAGTGGAAGCCCCGGTGGAAGTACTGGAGGTTATGGTAGTAACACCGGAAACTTTGGTGGTGGAGGAAGTGATAACCATGGTACAACTCCTGGTTTTAGTGGGGCTGCTGGTGAAGGCAGTGTTGCTGGTTTTGGTAGCAGTGACAATTTGGGAGGGGGTCTTGGCGGCAGTGATAGCTATTTTAGTGCTGGTTCTGGTGGTGGCAGTGGCGGTTTCGCCAGTAGTAGATTTGATGGGAGTAGTGGTCAATTGGATAGCAATGAAAGTGGCAATCTGGGTAAGGATGTTGGAGATTACGGGGAACCGTTGGAAGGAAATTACATGGATGATGCTAGGGACTTTGCCAAGAGAGCTTGA 978 0.4765 MAFFGRVGNLLRQAINKQISSQLSSSPSVFQSIRCMSSAPSSKLFVGGLSYSTDERSLQEAFSKYGTVVDARVIMDRETGRSRGFGFVTFTSVEEASSAIQALDQKDLHSRMIRVNYANDRTRGFSSGGYGNASNASYGSGAGYGGAYGNAPYGGSGSGSGYGDSGAYGGNAAGGYGGGEYDPGSYGSGGNYRSGGSDNNYATDSLGSGSPGGSTGGYGSNTGNFGGGGSDNHGTTPGFSGAAGEGSVAGFGSSDNLGGGLGGSDSYFSAGSGGGSGGFASSRFDGSSGQLDSNESGNLGKDVGDYGEPLEGNYMDDARDFAKRA 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01952 325 SMART rrm1_1 43 116 IPR000504 GO:0003723
Bach2g01952 325 MobiDBLite consensus disorder prediction 272 325 - -
Bach2g01952 325 Gene3D - 11 136 IPR012677 -
Bach2g01952 325 SUPERFAMILY RNA-binding domain, RBD 38 149 IPR035979 GO:0003676
Bach2g01952 325 MobiDBLite consensus disorder prediction 281 297 - -
Bach2g01952 325 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 42 120 IPR000504 GO:0003723
Bach2g01952 325 MobiDBLite consensus disorder prediction 198 241 - -
Bach2g01952 325 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 44 113 IPR000504 GO:0003723
Bach2g01952 325 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 22 206 - -
Bach2g01952 325 CDD RRM2_NsCP33_like 43 118 - -
Bach2g01952 325 MobiDBLite consensus disorder prediction 198 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01952 Bach-Chr2 27276670 27278687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01952 41 163 Eukaryotic Initiation Factors Gene Family AT4G34110 30.216 1.78e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01952 K12741 - gmx:100799124 194.512