Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01936 ATGGAGTCTTGGAGTTATGTTTCTGAAGAGAAGGGTTTTGTGTCCAATGATACACTTTCACCACCTAATACTCTATCCAGAAGCAAAAGTTCCTTCTTGGGTTGGGACTTGAAAACCCCTTGTAGTTTTGGCAACGACATGTTAACCTCGGGTCAACAAAACATTGAGAATCAAGGTTTTGAGGAATTGGGATTTCCAGAAATGATGGGGAAACAATTGTCCGATGATTCCATTGCTGGTGTTCCTACCAGAAAGCTGGATGGTGGTCCTCTCGGAAGAACCAATATGAGTGCTCCAAATGGGTTTTGTGGAGGAGAAGACTTCAATTCGAAGCTGTCAAACTCTGTGGTTGACTCAAACAGTCGTGACTCGCTCATTGATTTGAAGCTGGGACGCTTTCCTGATCACAGAGATTCTCATGATTCGACCTTTTCCAGAGGAGCCCGCATTTTGTCTTCATCTGAGTCATCTACAGCACCCAGAAGAGTGCGAGCTTCGGGGGCACAGTCGCAAACTGCCTTCTGCCAAGTCTATGGCTGTAACAAGGATCTGAGTGCCTGTAAAGACTACCACAAGCGGCACAAAGTTTGCGAGGTTCACTCCAAGACTTCAAAAGTTATAGTGAACGGAATCGAACAGAGGTTTTGCCAGCAATGTAGTAGGTTTCATTTGCTGTCTGAATTTGATGATGGTAAGCGCAGCTGTCGCAAACGCCTTGCAGGCCACAACGAGCGTCGAAGAAAGCCCCAAGTTAATGTTCACTCTGGAAAGGCCGGGAGGTTGCTTCAGCCATATAGTAATAGCAGATTCCCGGGGACTACGCTGACAACAGCATCGTTTATCTGTCAAGAGATACTCCCGAGTCGGGTTTTGCGTTCTGAGAAATATGGAACCAATGACTGGTGGAGACCTATAAAAGTTGAAGATGGGACTGGCTACAGGAATCTATCTACCATTCCAGCCACAAATGGATATACACAATCAAGGTCGCTGTTTCCTTCATATAATGTTGAGAAACAGTTCCCTTTTCTTCATGAAAGTAGTGCTGCAGCCACTACAGGAAGCATCTTCTGTGATAACAGTAGCCAATATCCGCCAGCTCTTGGTGGTCCAAATTCTGGTCCACGATCATTATTTCAGGACGCTTCCTTAGGAAGCGAGGACTTTAATGTTTTTGATACATCATCAACTGTTCAAGGATTGTCGGGAATTTCAGACGCTGGCTGTGCTCTCTCTCTTCTGTCATCTCAATCCCAGAACTCTTCAAGCCATTCGTCAGTAATTCCCGTGGCTCGTCCCTTGGTTATCCCAAGCAACCATAGTAGCCATTACAGCATGAGTCCAGTATCTGAAAAGATCATTGGAATAAGCTCACAGTCACAGGCTTCTAGAAGTGGGATGTCCGTGGCAGATAGGTTTCCATCTGAAATGAATGTTGCTGGTGGGAGTCATCTTGGTCCTGTGTTGATATCAGACAATAATGAGCTTGTCAACTTTGAAATGGCAGATAGGATTTTCCAAGGCTCAGATTTTGTGAACATGAAAGTTCGTCTTTCTTGTGAAGATGGCCCTACCATTGACTTGCTTCAACTCTCATCACAGCTCCAGCGAGTTGAGCATCAGAGGCAATCCATGCAGGTGAAGCAAGAAAATGATTCTTCCTGCTCTCTCCGGATCACTTAG 1683 0.454 MESWSYVSEEKGFVSNDTLSPPNTLSRSKSSFLGWDLKTPCSFGNDMLTSGQQNIENQGFEELGFPEMMGKQLSDDSIAGVPTRKLDGGPLGRTNMSAPNGFCGGEDFNSKLSNSVVDSNSRDSLIDLKLGRFPDHRDSHDSTFSRGARILSSSESSTAPRRVRASGAQSQTAFCQVYGCNKDLSACKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLSEFDDGKRSCRKRLAGHNERRRKPQVNVHSGKAGRLLQPYSNSRFPGTTLTTASFICQEILPSRVLRSEKYGTNDWWRPIKVEDGTGYRNLSTIPATNGYTQSRSLFPSYNVEKQFPFLHESSAAATTGSIFCDNSSQYPPALGGPNSGPRSLFQDASLGSEDFNVFDTSSTVQGLSGISDAGCALSLLSSQSQNSSSHSSVIPVARPLVIPSNHSSHYSMSPVSEKIIGISSQSQASRSGMSVADRFPSEMNVAGGSHLGPVLISDNNELVNFEMADRIFQGSDFVNMKVRLSCEDGPTIDLLQLSSQLQRVEHQRQSMQVKQENDSSCSLRIT 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01936 560 ProSiteProfiles Zinc finger SBP-type profile. 172 249 IPR004333 GO:0003677
Bach2g01936 560 MobiDBLite consensus disorder prediction 1 26 - -
Bach2g01936 560 SUPERFAMILY SBT domain 173 253 IPR036893 GO:0003677|GO:0005634
Bach2g01936 560 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 95 547 IPR044817 GO:0003677
Bach2g01936 560 MobiDBLite consensus disorder prediction 137 165 - -
Bach2g01936 560 Coils Coil 528 548 - -
Bach2g01936 560 Pfam SBP domain 175 248 IPR004333 GO:0003677
Bach2g01936 560 FunFam Squamosa promoter-binding-like protein 14 166 236 - -
Bach2g01936 560 MobiDBLite consensus disorder prediction 145 165 - -
Bach2g01936 560 Gene3D - 165 236 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01936 Bach-Chr2 27166912 27170030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01936 1 291 SBP-box Gene Family AT1G69170 39.519 9.50e-50 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bach2g01936 SBP 7.8e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01936 - - gmx:100777766 760.37