Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01935 ATGGGTAGAGGGAGGGTTGAGCTTAAGAGGATAGAGAACAAAATTAACAGGCAGGTCACGTTTGCCAAGAGAAGAAATGGACTACTCAAGAAGGCTTATGAGCTCTCAGTCCTTTGTGATGCAGAGGTTGCCCTCATCATCTTCTCCAACCGTGGCAAGCTCTATGAGTTCTGTAGCGGCAACAGTATGATGAAAACACTGGAGAAATACCAGAGGTACAGCTATGGTACACTGCAATCGACCCGGCCAACCAGCGACACTCAGAGCAGCTACCAGGATTATTTGAGACTGAAAGCGAAGGTAGAACTCCTCCAACGTTCACAGAGAAACCTCCTAGGGGAAGACCTGGCCCAAATGAATACAAAGGACCTCGATCAGCTTGAAAATCAACTCGAGGTAGCATTGAGGAATATTAGGTCAACAAAGTTGGAAGAGATCAGTGGTGACCCCCAAGTTGCCCAAAGACTGGCTTGGGAAGCTGGAGGGCCTAACATCAACTACACTTGCTTTCCTTCGCAATCTGAGGGGCCTTTTCAGCCTTTAGGGGTCAACCCTAATTTGCAAATTGGATACAATCCAGTGGGTGCTAATGATGTAAATGTGGGGGCTGCAGCCTTAAACGTTCAAGGATTCGTCTCTGGGTGGATGCTTTGA 654 0.4771 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSGNSMMKTLEKYQRYSYGTLQSTRPTSDTQSSYQDYLRLKAKVELLQRSQRNLLGEDLAQMNTKDLDQLENQLEVALRNIRSTKLEEISGDPQVAQRLAWEAGGPNINYTCFPSQSEGPFQPLGVNPNLQIGYNPVGANDVNVGAAALNVQGFVSGWML 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01935 217 FunFam MADS-box transcription factor 1 13 88 - -
Bach2g01935 217 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Bach2g01935 217 CDD MADS_MEF2_like 2 79 IPR033896 GO:0000977|GO:0045944
Bach2g01935 217 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Bach2g01935 217 ProSiteProfiles K-box domain profile. 87 179 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach2g01935 217 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bach2g01935 217 Gene3D - 13 94 IPR036879 GO:0003677|GO:0046983
Bach2g01935 217 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bach2g01935 217 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 150 - -
Bach2g01935 217 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bach2g01935 217 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bach2g01935 217 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bach2g01935 217 SUPERFAMILY SRF-like 2 81 IPR036879 GO:0003677|GO:0046983
Bach2g01935 217 Pfam K-box region 84 144 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach2g01935 217 Coils Coil 117 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01935 Bach-Chr2 27149840 27154758 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01935 1 217 MADS-box Gene Family AT5G15800 48.669 2.74e-74 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Bach2g01935 K-box 1.4e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01935 K09264 - gmx:100797819 306.605