Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01934 ATGGGGAGAGGACGAGTGCAGTTGAAGAGGATCGAGAACAAGATCAACAGACAGGTGACCTTTTCCAAGAGAAGGTCCGGTTTGCTCAAGAAAGCCCATGAGATCTCTGTTCTTTGCGATGCCGAGGTTGCTATGATTGTCTTCTCCACCAAGGGCAAGCTTTTCGAGTACTCCAGCGATCCCTGTATGGAAAGAATTCTTGAACGGTACGAAAGGTATTCCTATGCAGAGAGGCAACCCGTTGCATATGATCAACAATCAAATCGCGATTGGATTCTGGAACATGCAAAGCTCAAGGCCAGGGTGGAGGTTTTACAAAAGAATCTAAGGCATTTCAAGGGAGAAGACCTAGATGGCCTAAGTTCCAAAGAACTTCAGAATTTGGAGCAACAACTTGACTCGGCTCTCAAACAAATTAGAACACGAAAGAACCAACTCATGCATGAATCTATCTCAGAGCTTCAGAAAAAGGACAAGGCTCTCCAGGAACAAAACAATCTGCTCGCAAAGAAGGTAAAGGAGAAAGAGAAGGCATTGGCTCTACAAGCACAATGGGAACAACAAAATCATGATGTGGACAATACCTGTGTCCTTCCATCACAACCTTTCCAGCCTTTGAATATTGGAGGGTCTAACCAGGCAGCAAGAATTGATGGAGGCGATAATGAAGGAACTCCAACTCAACCTCGAGTTACTCTCTTTCCTCCTTGGATGCTTCGCCCTCAAAATGATTAGAAAACTTAATAATATTACAGGCTC 759 0.444 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVAMIVFSTKGKLFEYSSDPCMERILERYERYSYAERQPVAYDQQSNRDWILEHAKLKARVEVLQKNLRHFKGEDLDGLSSKELQNLEQQLDSALKQIRTRKNQLMHESISELQKKDKALQEQNNLLAKKVKEKEKALALQAQWEQQNHDVDNTCVLPSQPFQPLNIGGSNQAARIDGGDNEGTPTQPRVTLFPPWMLRPQND 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01934 244 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Bach2g01934 244 Coils Coil 125 145 - -
Bach2g01934 244 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bach2g01934 244 Coils Coil 88 115 - -
Bach2g01934 244 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Bach2g01934 244 CDD MADS_MEF2_like 2 79 IPR033896 GO:0000977|GO:0045944
Bach2g01934 244 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 166 - -
Bach2g01934 244 Pfam K-box region 85 172 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach2g01934 244 SUPERFAMILY SRF-like 2 88 IPR036879 GO:0003677|GO:0046983
Bach2g01934 244 Gene3D - 13 93 IPR036879 GO:0003677|GO:0046983
Bach2g01934 244 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bach2g01934 244 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bach2g01934 244 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bach2g01934 244 Coils Coil 151 171 - -
Bach2g01934 244 ProSiteProfiles K-box domain profile. 88 178 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach2g01934 244 FunFam MADS-box transcription factor MADS-MC 13 86 - -
Bach2g01934 244 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bach2g01934 244 MobiDBLite consensus disorder prediction 208 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01934 Bach-Chr2 27137750 27141184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01934 1 210 MADS-box Gene Family AT1G26310 60.619 1.25e-89 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Bach2g01934 K-box 3.3e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01934 K09264 - cave:132175414 347.436