Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01922 ATGGCATCGACAATGGCAGATGTCACCTACCTTCGCCTCCACGAACCCGATGACGATCCACATCTTCCTGAGCAAACCCTAACTCGGGATTCCATCCCCTACTTGCCTCATCAGGATATTGATTTCTATGCTTCTGATCCAGATGTCCCACCGTCCGATGCCTCCCTCCAACCCCACACATCCTCCGGCGGTACTCCCTTGTCTGAACAATTTGAATCAACCATCTCTATTCGAGGTGAGGGTGACTTCTCGGACCCTGGTTCAATTTCAAACGCCGATCTTCTAGACCGCGAAAACCAGGTAAATTTCGTAATGGATCTCTTTCAACAACGTGTTGAGCAATCGCAGGTCATGGGCCACAGCGATTTGGTATCGGATAATGAATCGGGTTTTGGTGTTATTGACGGACACTGTGATGTAGGTGTTGATGGTTTGGGGCTGGATTTGGGGTTAAGTTTAGGATTTGGTGTCGAGAGGGATTGTGATGACAACTGTAGTTTCATGGTTGAAAGTTACGATTCAGTTGGTGGTGCTGGCGACGATGATGATATCTTCATTGGGAGGAGGGTTTCTGGATCTGAACCCGTTGAGGCACCGTCAACGTCAAGCAGGATGCAACCTTTTGAGAACTGTGTCCAGCTAGTGGGGTTTGGATCGGATGAGGATGAGGAGGAGAACGGGGTATTGGGTCTCAATTTGCATTCGGAAGATGAGTATAATGGGCATAACGAGAACGACGATGCTGCGAGCATCCCTCTCTGTTGGGATTCAGTTCAATTGGAGGATAACAGGGAGAGTAATGAAGATTTTGAGTGGGAGGAGGTGGATGGACGAGTTGACGAGAGGGAAGTTTTGAGCATGTTCACGGCTGAAGATGATAGGTCTATTTCGGTTTCAGTGTCGCCAGTAATTGGGCCTGAAGAAGAAGTAAGTGTTGTGAGGGTTGGAGGCATGGAAAATTTGGAGTGGGAAGTTTTGTTGAATGCCAATAATTTGGACACGAACCCTGATTTGGACCATGATGCAGAACCTTATTTTGGTGATCATGATGATTATATTTACACAGCAGAGTACGAAATGATGTTTGGACAATTTACTGAGAATGAGAACCCCTTAATGGGTCGGCCTCCAGCATCCCAATCAGTTGTTCAGCATCTTCCATCAGTTGTTATTACCAAGGAAGACGTGGAGAACAATAATGCACTTTGCGCAGTTTGCAAGGATGAGATCAAAGTTGAGGAACAAGCAAAACAGTTGCCATGTTCACATCGTTACCATGGTGACTGCATTATACCTTGGCTGGGTATTAGAAATACTTGCCCTGTCTGTCGTTATGAGTTTCCAACAGATGATCCTGATTATGAGCGTAGGAGGAGTCAAAGATCCGGCCGCAGCTTGTGA 1401 0.4668 MASTMADVTYLRLHEPDDDPHLPEQTLTRDSIPYLPHQDIDFYASDPDVPPSDASLQPHTSSGGTPLSEQFESTISIRGEGDFSDPGSISNADLLDRENQVNFVMDLFQQRVEQSQVMGHSDLVSDNESGFGVIDGHCDVGVDGLGLDLGLSLGFGVERDCDDNCSFMVESYDSVGGAGDDDDIFIGRRVSGSEPVEAPSTSSRMQPFENCVQLVGFGSDEDEEENGVLGLNLHSEDEYNGHNENDDAASIPLCWDSVQLEDNRESNEDFEWEEVDGRVDEREVLSMFTAEDDRSISVSVSPVIGPEEEVSVVRVGGMENLEWEVLLNANNLDTNPDLDHDAEPYFGDHDDYIYTAEYEMMFGQFTENENPLMGRPPASQSVVQHLPSVVITKEDVENNNALCAVCKDEIKVEEQAKQLPCSHRYHGDCIIPWLGIRNTCPVCRYEFPTDDPDYERRRSQRSGRSL 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01922 466 ProSiteProfiles Zinc finger RING-type profile. 403 444 IPR001841 -
Bach2g01922 466 MobiDBLite consensus disorder prediction 11 25 - -
Bach2g01922 466 MobiDBLite consensus disorder prediction 1 68 - -
Bach2g01922 466 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 252 448 - -
Bach2g01922 466 FunFam E3 ubiquitin-protein ligase RING1-like 364 450 - -
Bach2g01922 466 SMART ring_2 403 443 IPR001841 -
Bach2g01922 466 Pfam Ring finger domain 403 444 IPR001841 -
Bach2g01922 466 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 364 450 IPR013083 -
Bach2g01922 466 MobiDBLite consensus disorder prediction 54 68 - -
Bach2g01922 466 SUPERFAMILY RING/U-box 384 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01922 Bach-Chr2 27053655 27055055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01922 248 450 C3H Transcription Factor Family AT5G60820 47.442 3.82e-56 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01922 - - pcin:129307991 668.307