Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01905 TGAGAAGCAACAAGCCATTATCTCATAATCAATATCATTGTTACATCAGAAGTTTTATAAGTAATCAACTCCTTTAACCTAAGCTAAGCCAACCCTATTCTTCTACTCTCATGGAAAACCTTGAGACCTCGGAATCTCCATTCCAATCTCAAAACTCATATAGAAATCACTTTTCAATGCCTCTTGAAGCAGACAAATCCTATGAGAACAAAGATAGGAAGAGTGTGAAATTTGAAAGAAGAGAAAATATTAACGGGAGAAAGTTCCTTGGGGTGAGACAAAGGCCTTCAGGAAGATGGGTTGCTGAGATCAAGGAATCCGCACAGAAGCTGAGGCTGTGGTTAGGAACCTTTGACAGAGCAGAAGAAGCTGCCCTGGCTTATGACTGTGCTGCAAGGCTTCTAAGAGGTAGAAATGCCAGAACAAACTTTCCAAGCACTGGATTTGGCAACCCCCATGAGAAAAATCATGGCTTTTTTGGAAAGAATCCTAGAGCGTATCAGCTTCTTAAGCATGCAATCATGAAGAACCATGCACTACCTGCATCAGTTCACTCCACATCCATGCCATGGAAAAACCAGATCATGGATGATGAATTCGATACTCTTGTTGAAGAAACTATAGTTTGTTCTTCTAGCTCAGAGGAAGGCTCAGGGTGCAGTGGACTTTCATTTGGTAGCTCTAAGGTTTATTCTTCTGTTGTTGTAGCTCCTTCTTTCAGTTCTTCCCTCTGTCAAACAGGAGGTGAACATGGAGAAACCCTTCAATAAATGGAAAACCTTGAGACCTCGGAATCTCCATTCCAATCTCAAAACTCATATAGAAATCACTTTTCAATGCCTCTTGAAGCAGACAAATCCTATGAGAACAAAGATAGGAAGAGTGTGAAATTTGAAAGAAGAGAAAATATTAACGGGAGAAAGTTCCTTGGGGTGAGACAAAGGCCTTCAGGAAGATGGGTTGCTGAGATCAAGGAATCCGCACAGAAGCTGAGGCTGTGGTTAGGAACCTTTGACAGAGCAGAAGAAGCTGCCCTGGCTTATGACTGTGCTGCAAGGCTTCTAAGAGGTAGAAATGCCAGAACAAACTTTCCAAGCACTGGATTTGGCAACCCCCATGAGAAAAATCATGGCTTTTTTGGAAAGAATCCTAGAGCGTATCAGCTTCTTAAGCATGCAATCATGAAGAACCATGCACTACCTGCATCAGTTCACTCCACATCCATGCCATGGAAAAACCAGATCATGGATGATGAATTCGATACTCTTGTTGAAGAAACTATAGTTTGTTCTTCTAGCTCAGAGGAAGGCTCAGGGTGCAGTGGACTTTCATTTGGTAGCTCTAAGGTTTATTCTTCTGTTGTTGTAGCTCCTTCTTTCAGTTCTTCCCTCTGTCAAACAGGAGGTGAACATGGAGAAACCCTTCAATAAAAAAATGCCTTGTGCCATTTTATGTGAAGTATATTATGGCTTCTGTTGTATGTAGCCCTTTTCAATTGGCC 1501 0.4177 MENLETSESPFQSQNSYRNHFSMPLEADKSYENKDRKSVKFERRENINGRKFLGVRQRPSGRWVAEIKESAQKLRLWLGTFDRAEEAALAYDCAARLLRGRNARTNFPSTGFGNPHEKNHGFFGKNPRAYQLLKHAIMKNHALPASVHSTSMPWKNQIMDDEFDTLVEETIVCSSSSEEGSGCSGLSFGSSKVYSSVVVAPSFSSSLCQTGGEHGETLQ 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01905 219 Gene3D AP2/ERF domain 50 109 IPR036955 GO:0003700|GO:0006355
Bach2g01905 219 MobiDBLite consensus disorder prediction 1 21 - -
Bach2g01905 219 SUPERFAMILY DNA-binding domain 51 108 IPR016177 GO:0003677
Bach2g01905 219 Pfam AP2 domain 52 100 IPR001471 GO:0003700|GO:0006355
Bach2g01905 219 CDD AP2 51 108 IPR001471 GO:0003700|GO:0006355
Bach2g01905 219 ProSiteProfiles AP2/ERF domain profile. 51 108 IPR001471 GO:0003700|GO:0006355
Bach2g01905 219 MobiDBLite consensus disorder prediction 25 39 - -
Bach2g01905 219 MobiDBLite consensus disorder prediction 1 39 - -
Bach2g01905 219 PRINTS Ethylene responsive element binding protein signature 52 63 IPR001471 GO:0003700|GO:0006355
Bach2g01905 219 PRINTS Ethylene responsive element binding protein signature 74 90 IPR001471 GO:0003700|GO:0006355
Bach2g01905 219 SMART rav1_2 51 114 IPR001471 GO:0003700|GO:0006355
Bach2g01905 219 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 28 134 - -
Bach2g01905 219 FunFam ethylene-responsive transcription factor RAP2-11 50 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01905 Bach-Chr2 26972302 26973142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01905 48 107 AP2-EREBP Transcription Factor Family AT5G19790 73.333 3.30e-25 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Bach2g01905 AP2 3.1e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01905 K09286 - gmx:100807374 256.914