Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01899 ATGGTCGAACCGGAAGACAAACATCAAATCTCGCTTGAGGGTGAAATTGAGAAGAAGAAGAAGCACAAAAGAAAAAGAGCACGAAAAACTGCAACTGCCGAGCAATCTGAGCCTCAAGAGGCTGACGAGCGTGCAGTGGAAGAAGATGGCGAAGCCGAAGAGAATGGTCATTCTGAAGGAGAATTTAAGGCGGAAAATAAAAAGGATAAGAAAAAGAAGAAGCAAAAGAAGGTGAAGAGTGGGGAAGCAGAAATGGGCGGTGATGATAATGATGAGAACCAAGAGGAGGAGGAACAGCGAAAGGTGAAGAAGGTGGAGTCTGGAATTATGAGCTCTGTTTCATTTACTTCTGAAGAACTGAAATTGTCCGAGCCTACCTTAAGGGCTATCAACGAGATGGGATTCCAGCACATGACTCAGATTCAAGCGAGAGCAATTCCACCACTTCTAACGGGAAGAGATGTTCTTGGTGCTGCAAGGACAGGTTCTGGAAAAACTCTGGCTTTTCTAATACCAGCTGTTGAGCTGTTATACCACATTCAATTTACTCCCCGCAATGGAGCTGGTGTCATTGTCATATGCCCTACTAGGGAACTTGCAATACAGACACATGCTGTGGCAAAAGACCTGCTCAAGTACCATTCTCAAACTCTTGGATTGGTTATTGGGGGTTCTGCTAGAAGAGGAGAAGCTGAACGAATTGTTAAAGGGGTAAATCTATTAGTAGCAACTCCTGGTCGTCTTCTTGATCATCTCCAAAATACCAAGGGATTCATATATAAAAACTTAAAGTGCCTCATGATTGATGAAGCTGACAGGATATTGGAAGCAAACTTTGAGGAGGAAATGAAACAGATTATTAAGATCCTACCAAAGAGTAGGCAAACAGCTTTGTTTTCAGCTACGCAAACAAAGAAGGTTGAGGATCTTGCCCGCTTGTCATTTCAAACAAAACCTGTATATATTGGTGTGGATGATGACAGAACCAAGGTCACTAATGAAGGATTGCAGCAAGGCTATGTTGTTGTTCCCAGTGACAAGAGATTTATTGTTCTCTATTCTTTCTTGAAGAGATTTCACTCAAAAAAAGTGATGGTCTTCTTCTCTTCCTGCAACTCTGTCAAATTCCATGCAGAACTTCTCAATTACATACAGGTGAATTGTTTTGATATTCATGGAAAACAAAAGCAACAGAGACGGACAAATACTTTCTTTGAATTCTGCAAAGCAGAAAAAGGGATCCTGCTGTGTACCGATGTTGCTGCTCGTGGGCTTGATATACCTGCTGTGGACTGGATTGTGCAGTATGATCCTCCTGATGACCCCAAGGAATATATACATAGGGTTGGTCGAACAGCTCGTGGAGAAGGTGGAAAAGGAAATGCTTTGCTTTTCCTGATTCCTGAAGAATTACAATTTCTTCGATATCTGAAGGCAGCAAAGGTTCCCGTGAAAGAGTATGCATTTGAAGAAAAGAAGCTGGCTAATGTGAAGTCTCAGCTGGAGAAGCTAGTGGGAAACAATTATAATTTGAACCAGTCGGCTAAAGAAGCTTACAGATCGTATATACTTTCTTATAATTCACACTCTATGAAAGATATATTTAATGTTCACCACCTTGATTTACAGGCTGTTGCTGCTTCATTCTGTTTTTCAAACCCACCAAAGGTGAATATAAACATAAACAGCACTGCTTCAAAGATTAGGAAGAAAATGCGTCAAATTGATGGAAAAAGACATGGATTTAGCGAGAGCAATCCCTATGGAAAGCGTAATGAGGATGATAAGCGGCAATTTTTGAGGCATTAA 1809 0.4118 MVEPEDKHQISLEGEIEKKKKHKRKRARKTATAEQSEPQEADERAVEEDGEAEENGHSEGEFKAENKKDKKKKKQKKVKSGEAEMGGDDNDENQEEEEQRKVKKVESGIMSSVSFTSEELKLSEPTLRAINEMGFQHMTQIQARAIPPLLTGRDVLGAARTGSGKTLAFLIPAVELLYHIQFTPRNGAGVIVICPTRELAIQTHAVAKDLLKYHSQTLGLVIGGSARRGEAERIVKGVNLLVATPGRLLDHLQNTKGFIYKNLKCLMIDEADRILEANFEEEMKQIIKILPKSRQTALFSATQTKKVEDLARLSFQTKPVYIGVDDDRTKVTNEGLQQGYVVVPSDKRFIVLYSFLKRFHSKKVMVFFSSCNSVKFHAELLNYIQVNCFDIHGKQKQQRRTNTFFEFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGGKGNALLFLIPEELQFLRYLKAAKVPVKEYAFEEKKLANVKSQLEKLVGNNYNLNQSAKEAYRSYILSYNSHSMKDIFNVHHLDLQAVAASFCFSNPPKVNININSTASKIRKKMRQIDGKRHGFSESNPYGKRNEDDKRQFLRH 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01899 602 Coils Coil 487 507 - -
Bach2g01899 602 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 267 275 IPR000629 -
Bach2g01899 602 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 146 321 IPR014001 -
Bach2g01899 602 MobiDBLite consensus disorder prediction 41 55 - -
Bach2g01899 602 Pfam Helicase conserved C-terminal domain 352 455 IPR001650 -
Bach2g01899 602 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 115 143 IPR014014 GO:0003724
Bach2g01899 602 Pfam Domain of unknown function (DUF4217) 498 557 IPR025313 -
Bach2g01899 602 SMART helicmild6 375 456 IPR001650 -
Bach2g01899 602 Gene3D - 55 324 IPR027417 -
Bach2g01899 602 MobiDBLite consensus disorder prediction 1 105 - -
Bach2g01899 602 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 477 IPR027417 -
Bach2g01899 602 SMART DUF4217_3 496 559 IPR025313 -
Bach2g01899 602 SMART ultradead3 134 339 IPR014001 -
Bach2g01899 602 MobiDBLite consensus disorder prediction 577 602 - -
Bach2g01899 602 Coils Coil 64 84 - -
Bach2g01899 602 Gene3D - 332 578 IPR027417 -
Bach2g01899 602 PANTHER RNA HELICASE 68 517 - -
Bach2g01899 602 CDD DEADc_DDX18 126 323 IPR044773 GO:0003724|GO:0005524
Bach2g01899 602 MobiDBLite consensus disorder prediction 572 602 - -
Bach2g01899 602 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 335 505 IPR001650 -
Bach2g01899 602 MobiDBLite consensus disorder prediction 1 18 - -
Bach2g01899 602 FunFam RNA helicase 332 562 - -
Bach2g01899 602 Pfam DEAD/DEAH box helicase 139 310 IPR011545 GO:0003676|GO:0005524
Bach2g01899 602 CDD SF2_C_DEAD 336 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01899 Bach-Chr2 26921789 26927719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01899 97 475 Eukaryotic Initiation Factors Gene Family AT3G19760 28.684 8.25e-48 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01899 K13179 - sind:105164333 873.233