Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01871 ATGACGATTGACGACGAGAGCTCTATATATATCGGAGGTCTCCCCTACGACGCCACCGAAGATACTATTCGGAATGTCTTTGATTTGTATGGCGCCATTGTTGACATCAAGATTATTAATGATCAACGGACAAGGGGCAAATGTTATGGTTTTGTTACTTTCACAAATCCAGGGTCTGCGATAAATGCAATCAGTGACATGAATGGGAGGACCATTGGTGGACGTGTGGTTAAAGTAAATGGGGTGAGGACTCGAGGTGGAAGATCCAATTTTGGTAGAGAACATTTTTCTGACAACGTTGACCGGAATGGAGACTGGGATCGCAGCAGAAATCGAGACAGAGATTACAATCATGATCGTGACAAAGATGGATACAGGAATCGAAACAATGAGTGGTCCAGAAAGCGTGGTAGGTCTCGAGATCGTGAGCAAGACAAGGATAGAAGATATGAACGCATACGAGGTGATGATCTAGCTAGAGAATCTTTACTAGATGAAGATCAAAGTCAAGAGGAAGATCGAGTGGATAATGGAAAAGAATACAACATAGCACATGGTCAAAATATGGAAAGAGACCATCACTTGGATATGGATACAGAAAGGAAGATGAATAGGATTAGTGATCCTGATAGAAGTTCTGATGATGACAGAAATGAACAATCGAGAAGAAATAATGGTTTTAGTATTGATGTTTCTTTAGATCCAGATGGTAATCACCATGATCAGGTAGAAGGTGAATTGAAGATATCAACTCAAAGGGTTGATCAGCTCAAAATAGAGATTTCTCAGATGGAAGAGAAGTTGGAAGAGAGACGACATCTTATTGCAGATTTACAAAGGCAGTCTAGGAAATTGGAGGATGCATTGGTTAATGCAAAGAAACAGTCTTCATATCGCCAGACTCAGTTGACCAAGCTACAGAAATGTTTTCTGCAAGTGAAAGACTACACTGAAAGGCTTAAAACCTGTGAAAAAGAACTTCAGGCTCTGGTTGATACAGTAATGTTAGAGGGTGACGAGAATGCTGTGGGCTTAAAGGATGGACAACTCACTATTGAAAACGCATGATCTGTGATTCTCTTTTGAAGGTCATCG 1095 0.4073 MTIDDESSIYIGGLPYDATEDTIRNVFDLYGAIVDIKIINDQRTRGKCYGFVTFTNPGSAINAISDMNGRTIGGRVVKVNGVRTRGGRSNFGREHFSDNVDRNGDWDRSRNRDRDYNHDRDKDGYRNRNNEWSRKRGRSRDREQDKDRRYERIRGDDLARESLLDEDQSQEEDRVDNGKEYNIAHGQNMERDHHLDMDTERKMNRISDPDRSSDDDRNEQSRRNNGFSIDVSLDPDGNHHDQVEGELKISTQRVDQLKIEISQMEEKLEERRHLIADLQRQSRKLEDALVNAKKQSSYRQTQLTKLQKCFLQVKDYTERLKTCEKELQALVDTVMLEGDENAVGLKDGQLTIENA 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01871 355 MobiDBLite consensus disorder prediction 88 223 - -
Bach2g01871 355 SMART rrm1_1 8 80 IPR000504 GO:0003723
Bach2g01871 355 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 84 IPR000504 GO:0003723
Bach2g01871 355 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 2 194 - -
Bach2g01871 355 CDD RRM_SF 9 80 - -
Bach2g01871 355 Gene3D - 2 97 IPR012677 -
Bach2g01871 355 Coils Coil 313 333 - -
Bach2g01871 355 MobiDBLite consensus disorder prediction 87 238 - -
Bach2g01871 355 SUPERFAMILY RNA-binding domain, RBD 4 110 IPR035979 GO:0003676
Bach2g01871 355 Coils Coil 240 295 - -
Bach2g01871 355 PANTHER GEO13361P1-RELATED 6 144 - -
Bach2g01871 355 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 78 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01871 Bach-Chr2 26690361 26693512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01871 2 79 Eukaryotic Initiation Factors Gene Family AT1G71770 30.769 1.13e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01871 - - gmx:100816804 429.098