Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01844 ATGAGTTTTCCTGATCATCCTCCGCCCTTCACAATGTCGCCGCCGCCTTTTGCTGCAGATACCGAAGCCAATGGTGTTTGGCATCAATTCCAAATTTTCAATGAACAATTTGTCCCTCATTCGCAGTATGAACAGGCTCCTTCATTCAAGAGGGCCAGGACTTCTGAGACCATCCCCATTAATTCCAGAATGCACCCACCAAATCCAATTAACAAAGGAACAAGCCATATCTTCTTCAAGACCCGCATGTGTGTAAAATTCAAAATGGGTATTTGTAGGAACGGTGAAAATTGCAACTTTGCACATGGCATTGAAGATATGAAACAGCCACCACCAAATTGGCAGGAACTTATTGGCATGCGGGATGAAGAGCGATCATCGGGTAATTGGGATGATGACCAAAAAATAATTCATAAGATGAAGTTATGCAAGAAGTATTACAATGGGGAGGAACGCCCTTATGGCGATAGGTGTAATTTTCTTCATGAAGACCCAGCTAAGTTCAGAGATGATTCTGAGAGGTACAGAGAGAGTTCAGCAATAAGCATTGGAACCAATGGATCGCCAAAGTCGCAAGGCAATGGCTCTGTTAACTCTGACAGTAATGGGCATGTGAACACAGGCTTTGATGCTCTCCGATCAAATGTGAAGTCTGCATTTTGGAAGACCAAGTTGTGTATCAAGTGGGAGACAACAGGTCAATGTGGATTCGGAGATAAGTGTCACTTTGCTCATGGTCAAGAAGAGTTAAAAGTGCCTGTTGGACGCATTGAAACAGAAGCTACAAGCTCCATTTTAGTTGCGGCGAAATCTATATCAGTTCCTGCAAATGATGCAATTCCTAGCAATACAGCAGCAGCAATTCGAAGGGCTTCAAATGAAGAGGAGCATGGTAAGAAGAGTTTACTCAAGTGGAAAGGGCCTAAGAAGATTAATCGAATTTATGCTGATTGGCTTGATGATGTGCCTCTTTTGCACAACTTGTCAAGGAGTTGTAAACACCAGTAA 1008 0.4296 MSFPDHPPPFTMSPPPFAADTEANGVWHQFQIFNEQFVPHSQYEQAPSFKRARTSETIPINSRMHPPNPINKGTSHIFFKTRMCVKFKMGICRNGENCNFAHGIEDMKQPPPNWQELIGMRDEERSSGNWDDDQKIIHKMKLCKKYYNGEERPYGDRCNFLHEDPAKFRDDSERYRESSAISIGTNGSPKSQGNGSVNSDSNGHVNTGFDALRSNVKSAFWKTKLCIKWETTGQCGFGDKCHFAHGQEELKVPVGRIETEATSSILVAAKSISVPANDAIPSNTAAAIRRASNEEEHGKKSLLKWKGPKKINRIYADWLDDVPLLHNLSRSCKHQ 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01844 335 SMART c3hfinal6 137 164 IPR000571 GO:0046872
Bach2g01844 335 SMART c3hfinal6 220 247 IPR000571 GO:0046872
Bach2g01844 335 SMART c3hfinal6 78 104 IPR000571 GO:0046872
Bach2g01844 335 ProSiteProfiles Zinc finger C3H1-type profile. 137 165 IPR000571 GO:0046872
Bach2g01844 335 FunFam Zinc finger CCCH domain-containing protein 39 134 166 - -
Bach2g01844 335 SUPERFAMILY CCCH zinc finger 219 251 IPR036855 GO:0046872
Bach2g01844 335 FunFam Zinc finger CCCH domain-containing protein 215 252 - -
Bach2g01844 335 ProSiteProfiles Zinc finger C3H1-type profile. 78 105 IPR000571 GO:0046872
Bach2g01844 335 SUPERFAMILY CCCH zinc finger 76 109 IPR036855 GO:0046872
Bach2g01844 335 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 221 247 IPR000571 GO:0046872
Bach2g01844 335 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 80 103 IPR000571 GO:0046872
Bach2g01844 335 Gene3D - 213 252 - -
Bach2g01844 335 ProSiteProfiles Zinc finger C3H1-type profile. 220 248 IPR000571 GO:0046872
Bach2g01844 335 PANTHER CCCH ZINC FINGER/TIS11-RELATED 48 171 IPR045877 GO:0003729
Bach2g01844 335 Gene3D - 77 180 - -
Bach2g01844 335 MobiDBLite consensus disorder prediction 169 201 - -
Bach2g01844 335 MobiDBLite consensus disorder prediction 178 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01844 Bach-Chr2 26533847 26535907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01844 219 268 C3H Transcription Factor Family AT1G68200 42.308 5.09e-07 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bach2g01844 zf-CCCH 2.3e-10 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01844 - - gmx:100780649 434.876