Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01833 AATTTCGCTGTTTGATCAGAACAACGACGATGGCATGGTCTGATGCTGGTATCGGCTTTAATCAGAAGCAGAACCGCTACGTTCCTCCACAGCACAGGAACAATGTGATTTCTTGTTTCAACAATGCGGACTCTTTTTGTAATGAGTCAGCTCAGTCTGGTTTTTCCTCTTTCACCCGTTCTGGTTATGGACAACATGGCTGGGCTGGTCCGAGTAATGACCGCTTAGGCACTGGTGGCCGTGATCGCGATCGAGGTCGAGGCCACCGGTCCGGTAGCCAGGAAGGGGTCAGCGGGTCGACCTCTTACCCGAACCGGGATTCGTTCGATGAGCCAGATATCCCAGTTGAGGGTATCAGTTTTGATGCATACGAAGATATCCCAGTTGAGGCCAGTGGCTCTGACATATCTCCACCAGTCAATACCTTCGCAGAAATTGACTTGGACGAGCGTTTGAACGAGAATATCAGGCGATGCAAGTACGTAAAACCCACTCCGATTCAGCGTCATGCTATACCCATTGCCGTTGCAGGTCGTGACATGATGGCTTGCGCGCAGACTGGGTCAGGAAAGACTGCGGCGTTCTGTTTTCCCATTATTTCTGGGATTTTGAAGGGTCGTTTATGCTTGCCGCCGGCGGCTCGTGGCGGCGGAATTGCATATCCTTCTGCGCTAATCCTGTCTCCAACTAGGGAGTTGTCATGTCAGATATATGATGAAGCAAGGAAGTTTGCATATGAGACTGGAGTGAAGATTGCTGTTGCTTATGGTGGGACACCGATTGTTCAGCAGCTACGGATTCTAGAAAGGGGTGTGGACATTTTAGTTGCAACTCCTGGGCGCTTGGTGGATATAATCGAGAGAGCAAGGGTTTCACTCACAAGAATAAAATATTTGGCTCTGGATGAGGCTGACCGTATGTTAGACATGGGCTTTGAGCCTCAAATCAGAAAGATTGTTGAACAAAGGGATATGCCTCCGCCAGGTGTTAGACAGACTATGCTTTTCAGTGCTACATTCCCAAATGATATACAGAAGCTTGCATCTGACTTTCTTACAAACTACATATTCCTGGCTGCTGGAAGAGTTGGTTCAAGCACTGAACTAATTGTACAGAAAGTAGAACTTGTTCAGGATATAGACAAAAGAAACCATCTTTTGGATCTTCTCCATTCACAAATGGGAAATGGAGCCAATGGGAAGCAAGCTTTGACTCTAGTGTTCGTTGCAACAAAGAAAGGGGCCGATGCTTTGGAATTTTGGCTGTCGAAAAAAGGTTTTCCAGCCATTGCAATACATGGTGACAAAGTTCAAGTGGAGAGGGAACGAGCATTAAAATCTTTCAAAACTGGTGCTACTCCAATCTTGGTGGCGACTGATGTTGCTTCACGAGGTCTGGATATACCACATGTAACCCATGTTATCAACTTTGACTTGCCGAAAGACATAGATTACTACGTTCACAGGATAGGCCGAACAGGTCGTGCTGGCAAGTCTGGTTTGGCCACTGCCTTCTTCAGTGATAACAACGCCCCTCTTGCAAAGGGCCTTGTTGGACTCATGCGGGAAGCAAACCAAGAAGTTCCCTCTTGGCTTAGCCAATACGCTGAGACCTTACCATCAGTTGGTCGTAGCAGTCGGAGCCAGCGAGATAGTGGTGGCAAGTATGGTGGCCGCGACTTTCGAAGTGTCGCTGAAGCAGAGGTTGAGAATTACAACCAGCTTAGTTCTTATGACATGGCAAACTCTCACCGTGATTCCTCTTATGATATTACAAACACATACACTGCTAGTAGGAATTATTATGTTGGTGTTACTGCTAATGCTGGTAGAGCTGGGAAGGCCGAAGATGGGCTATACGGATATGCGTCTGTTGTTGCTACAGGATGGGACTAG 1895 0.4739 MAWSDAGIGFNQKQNRYVPPQHRNNVISCFNNADSFCNESAQSGFSSFTRSGYGQHGWAGPSNDRLGTGGRDRDRGRGHRSGSQEGVSGSTSYPNRDSFDEPDIPVEGISFDAYEDIPVEASGSDISPPVNTFAEIDLDERLNENIRRCKYVKPTPIQRHAIPIAVAGRDMMACAQTGSGKTAAFCFPIISGILKGRLCLPPAARGGGIAYPSALILSPTRELSCQIYDEARKFAYETGVKIAVAYGGTPIVQQLRILERGVDILVATPGRLVDIIERARVSLTRIKYLALDEADRMLDMGFEPQIRKIVEQRDMPPPGVRQTMLFSATFPNDIQKLASDFLTNYIFLAAGRVGSSTELIVQKVELVQDIDKRNHLLDLLHSQMGNGANGKQALTLVFVATKKGADALEFWLSKKGFPAIAIHGDKVQVERERALKSFKTGATPILVATDVASRGLDIPHVTHVINFDLPKDIDYYVHRIGRTGRAGKSGLATAFFSDNNAPLAKGLVGLMREANQEVPSWLSQYAETLPSVGRSSRSQRDSGGKYGGRDFRSVAEAEVENYNQLSSYDMANSHRDSSYDITNTYTASRNYYVGVTANAGRAGKAEDGLYGYASVVATGWD 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01833 621 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 213 501 IPR027417 -
Bach2g01833 621 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 372 526 IPR001650 -
Bach2g01833 621 Pfam Helicase conserved C-terminal domain 372 487 IPR001650 -
Bach2g01833 621 FunFam Probable ATP-dependent RNA helicase DDX4 97 350 - -
Bach2g01833 621 CDD DEADc_DDX3_DDX4 132 354 IPR044763 GO:0003724|GO:0005524
Bach2g01833 621 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 104 526 - -
Bach2g01833 621 CDD SF2_C_DEAD 360 496 - -
Bach2g01833 621 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 131 159 IPR014014 GO:0003724
Bach2g01833 621 SMART helicmild6 406 487 IPR001650 -
Bach2g01833 621 Gene3D - 351 528 IPR027417 -
Bach2g01833 621 MobiDBLite consensus disorder prediction 53 105 - -
Bach2g01833 621 MobiDBLite consensus disorder prediction 83 97 - -
Bach2g01833 621 MobiDBLite consensus disorder prediction 67 81 - -
Bach2g01833 621 Gene3D - 96 350 IPR027417 -
Bach2g01833 621 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 162 348 IPR014001 -
Bach2g01833 621 Pfam DEAD/DEAH box helicase 155 337 IPR011545 GO:0003676|GO:0005524
Bach2g01833 621 SMART ultradead3 150 363 IPR014001 -
Bach2g01833 621 FunFam ATP-dependent RNA helicase RhlB 351 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01833 Bach-Chr2 26475433 26478791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01833 113 507 Eukaryotic Initiation Factors Gene Family AT3G19760 31.061 3.29e-56 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01833 K11594 - qsa:O6P43_023075 772.311