Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01740 ATGTGTGTGCAGGACGCGGACCAAGGTGCTCAAGATATGGACAACCTCGACGACAGGAGAAAGTCATGGCCTTCGCAATGCGAGCTCTTGCATACCCAGATGAACAACTGGGAAAAAGGATCTCCTTTGGAATCTCCCACTGATCGTCTGGAAAGCATATGTGAGGATACAGTTATTGCAGACGAAAAACAGAACCCAATGAACTTCGTCCCTTCTCTTAGGTCTGGAGAATGGTCAGATATAGGAGGTCGCGATCATATGGAAGATACCCATATATGCATTGGAGACTTAGCAAAGAAGTTCGGTTTTGACGTCCTTGCTGAGGAAGCTGTTTCATTTTATGGTGTATTTGATGGACATGGAGGGAAGAGTGCTGCACAATTTGTCCGTGATCATCTGCCAAGAATTATCGTTGAGGATGCCAACTTCCCTTTGGAGATTGAGAAGGTGGTCACAAGGTCATTTTTGGAGACAGATGCTGCATTAGCAAAGACATGTTCACCTCAGTCTTCCCTTTCTTCTGGGACAACTGCACTAACGGCAATTATATTTGGAAGGTCTTTACTTGTAGCCAATGCTGGAGACTGCCGTGCTGTTTTGTCCCGACATGGAGGGGCTATAGAAATGTCCAAAGATCATAAACCGTTTTGTAGCAAAGAAAGGAGACGGATTGAATCATTGGGTGGCTTCGTTGATGATGGTTACCTGAATGGCCAGTTAGGTGTCACTCGTGCTCTTGGGGACTGGCATCTTGAAGGATTAAAGGAAATGAGTGAAAAAGGTGGACCACTGATTGCTGAGCCCGAACTTAAATTGATAACATTGACAAAAGAAGATGAATTCTTGATAATTGGTAGTGATGGTATCTGGGATGTTTTTACTAGCCAAAATGCCATAGATTTTGCTCGGAGGAGGCTTCAAGAGCACAATGATGTGAAACAATGCAGCAGGGAAATAGTGGAGGAAGCAATAAAGAGAGAATCAACAGACAATTTGACAGTGGTGATGGTGTGTTTTCACTCAGATCCACCACCACCACCGGTGGTTGTAGAAAGGGCAAGAGTCAGGAGAAGCATTTCTGCCGAGGGACTTCAGAATCTTAAATGCCATTTAGAAGGATAA 1122 0.4447 MCVQDADQGAQDMDNLDDRRKSWPSQCELLHTQMNNWEKGSPLESPTDRLESICEDTVIADEKQNPMNFVPSLRSGEWSDIGGRDHMEDTHICIGDLAKKFGFDVLAEEAVSFYGVFDGHGGKSAAQFVRDHLPRIIVEDANFPLEIEKVVTRSFLETDAALAKTCSPQSSLSSGTTALTAIIFGRSLLVANAGDCRAVLSRHGGAIEMSKDHKPFCSKERRRIESLGGFVDDGYLNGQLGVTRALGDWHLEGLKEMSEKGGPLIAEPELKLITLTKEDEFLIIGSDGIWDVFTSQNAIDFARRRLQEHNDVKQCSREIVEEAIKRESTDNLTVVMVCFHSDPPPPPVVVERARVRRSISAEGLQNLKCHLEG 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01740 373 CDD PP2Cc 74 339 IPR001932 -
Bach2g01740 373 ProSitePatterns PPM-type phosphatase domain signature. 113 121 IPR000222 GO:0043169
Bach2g01740 373 ProSiteProfiles PPM-type phosphatase domain profile. 74 339 IPR001932 -
Bach2g01740 373 SMART PP2C_4 64 337 IPR001932 -
Bach2g01740 373 MobiDBLite consensus disorder prediction 1 20 - -
Bach2g01740 373 Gene3D - 56 342 IPR036457 -
Bach2g01740 373 Pfam Protein phosphatase 2C 83 331 IPR001932 -
Bach2g01740 373 SUPERFAMILY PP2C-like 65 340 IPR036457 -
Bach2g01740 373 FunFam Probable protein phosphatase 2C 22 58 342 - -
Bach2g01740 373 PANTHER PROTEIN PHOSPHATASE 2C 61 337 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01740 Bach-Chr2 25803403 25806191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01740 50 373 PP2C-type Phosphatase Gene Family AT2G25620 60.121 1.16e-138 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Bach2g01740 PP2C 3.9e-70 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01740 K14803 - gmx:100820303 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00662 5 4525868 4529481 Bach2g01740 2 25803403 25806191 BWGD
Bach2g01740 2 25803403 25806191 Bach2g01740 2 25803403 25806191 ECH