Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01732 CAACTATCCTCCCTTCCTCTCTTCTCTTTCTTTAACTCTGGTTTTTTGATACTGCGGAAAGACCTCAAATTTCTCTTCTTCTTAGTTTCTGTTTTTGGATCTTAGTGCCAAGAAGACCAAAAAAATGTAGTGGGATAACAAAGAATTTCTGAAAAAGCGCTTTAGCATTAGCAAATTAATGGCTTTCCACGACCATCTTCCTCACGAAATGGCTTTTCAGCCTTTCACTGATGAGCAACAGTTAAGTCAAAACAGAGACATGCAGAGGCTTCTACCACTGTCCTCTGCCGCCACCGGCGGTGGGGGAGGAGGAGGAGGAGCTGCGCCGACTTGGCTGAACAACGCCACTCTCCGGCAGCAGAATTTCTTCCACTCACAACCAGAATCGTCCACGCAAACCGGTGACGATGTCCGTGGGATAATAGGCTCTGATAAAAGCATCGATCGCGGTGATCGGAACCGTACCCACAGCAATTGCGAATCCGATGATTTAACAGAATACAAAGCAGATATTTTGGGACACCCTCTGTACGATCAGCTCCTATCGGCACATGTTTCATGTTTAAGGATAGCCACACCAGTAGACCAGCTACCCAGGATCGATGCCCAGCTGCAGCAGTCACAGCGAGTGGTGGAAAAATACTCTGGGCTCGGAAACGGGGTGGTCGATGAAAAGGAGCTCGATCAGTTTATGACACATTATGTTCTATTGCTCTGTGCCTTCAAAGAACAATTGCAACAACATGTTCGTGTTCATGCCATGGAAGCAGTGATGGCTTGTTGGGAGCTTGAGCAGTCTCTACAGAGCTTGACCGGTGTATCTCCGGGAGAAGGGACTGGTGCAACAATGTCGGATGATGAAGATGATCAGGCAGATAGCAACGCTAACTTATATGAAGGGGGTCTGGATGGTGCAGATAGCCTTGGCTTTGGGCCTCTTGTTCCCACTGAAAGTGAAAGATCTTTGATGGAGCGTGTGAGACACGAGTTGAAGCATGAGCTAAAACAGGATTACAAAGAGAAAATTGTGGACATAAGAGAAGAAATTCTGAGAAAGAGAAGAGCGGGGAAGCTGCCGGGGGACACAACTTCCCTTTTAAAAACATGGTGGCAGACTCATTCTAAGTGGCCCTATCCAACTGAGGAAGACAAGGCAAGGTTGGTGCAGGAAACTGGGTTGCAATTAAAGCAGATAAACAACTGGTTCATAAACCAAAGGAAAAGGAATTGGCACACTAACCCTTCAACCTCCAATTCCACCAAAAGCAAGCGTAAGAGCAGTGCAGGTGAAAGTAACCAGAGCTTCATGTGAATGGACGTCCGTACAAAAAATACTTTGTAGGAAAAAGTGATTGTATTGATGATGGTAAGCAGGAATTAGACACCCTAGCGTGATCCTGGAACGATGGGGGATATGGG 1419 0.4651 MAFHDHLPHEMAFQPFTDEQQLSQNRDMQRLLPLSSAATGGGGGGGGAAPTWLNNATLRQQNFFHSQPESSTQTGDDVRGIIGSDKSIDRGDRNRTHSNCESDDLTEYKADILGHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLQQSQRVVEKYSGLGNGVVDEKELDQFMTHYVLLLCAFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVSPGEGTGATMSDDEDDQADSNANLYEGGLDGADSLGFGPLVPTESERSLMERVRHELKHELKQDYKEKIVDIREEILRKRRAGKLPGDTTSLLKTWWQTHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHTNPSTSNSTKSKRKSSAGESNQSFM 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01732 377 SMART HOX_1 292 357 IPR001356 GO:0003677
Bach2g01732 377 SMART KNOX2_2 157 213 IPR005541 GO:0003677|GO:0005634
Bach2g01732 377 SUPERFAMILY Homeodomain-like 292 357 IPR009057 -
Bach2g01732 377 SMART KNOX1_2 106 150 IPR005540 GO:0003677|GO:0005634
Bach2g01732 377 Pfam Homeobox KN domain 310 349 IPR008422 GO:0003677|GO:0006355
Bach2g01732 377 SMART ELK_2 270 291 IPR005539 GO:0003677
Bach2g01732 377 Gene3D - 296 373 - -
Bach2g01732 377 MobiDBLite consensus disorder prediction 82 101 - -
Bach2g01732 377 Pfam ELK domain 270 291 IPR005539 GO:0003677
Bach2g01732 377 FunFam homeobox protein knotted-1-like 3 isoform X1 291 352 - -
Bach2g01732 377 ProSiteProfiles ELK domain profile. 270 290 IPR005539 GO:0003677
Bach2g01732 377 Coils Coil 276 296 - -
Bach2g01732 377 ProSiteProfiles 'Homeobox' domain profile. 290 353 IPR001356 GO:0003677
Bach2g01732 377 Pfam KNOX1 domain 108 149 IPR005540 GO:0003677|GO:0005634
Bach2g01732 377 MobiDBLite consensus disorder prediction 347 377 - -
Bach2g01732 377 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 127 367 - -
Bach2g01732 377 Pfam KNOX2 domain 163 212 IPR005541 GO:0003677|GO:0005634
Bach2g01732 377 CDD homeodomain 293 354 IPR001356 GO:0003677
Bach2g01732 377 MobiDBLite consensus disorder prediction 212 234 - -
Bach2g01732 377 MobiDBLite consensus disorder prediction 66 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01732 Bach-Chr2 25749086 25752838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01732 69 373 Homeobox Transcription Factor Family AT5G11060 73.802 9.05e-164 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Bach2g01732 KNOX2 2.7e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01732 - - pcin:129320455 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00670 5 4560590 4563942 Bach2g01732 2 25749086 25752838 BWGD
Bach2g01732 2 25749086 25752838 Bach2g01732 2 25749086 25752838 ECH